RNA–Protein interactions for RNA: ENST00000569036.2

CDH3-208, Transcript of cadherin 3, humanhuman

TSL 4

Gene CDH3, Length 563 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-208ENST00000569036 TRIM71Q2Q1W2 868 aaKnown RBP13.47□□□□□ -0.25
CDH3-208ENST00000569036 LCORLQ8N3X6 602 aa13.47□□□□□ -0.25
CDH3-208ENST00000569036 TOP1MTQ969P6 601 aa13.47□□□□□ -0.25
CDH3-208ENST00000569036 TLR7Q9NYK1 1049 aaKnown RBP13.47□□□□□ -0.25
CDH3-208ENST00000569036 CYP39A1Q9NYL5 469 aa13.47□□□□□ -0.25
CDH3-208ENST00000569036 DBNLQ9UJU6 430 aaKnown RBP13.47□□□□□ -0.25
CDH3-208ENST00000569036 FEM1BQ9UK73 627 aa13.47□□□□□ -0.25
CDH3-208ENST00000569036 BARX2Q9UMQ3 279 aaPredicted RBP13.47□□□□□ -0.25
CDH3-208ENST00000569036 ANP32CO43423 234 aa13.46□□□□□ -0.25
CDH3-208ENST00000569036 GLP2RO95838 553 aa13.46□□□□□ -0.25
CDH3-208ENST00000569036 LMNAP02545 664 aaKnown RBP13.46□□□□□ -0.25
CDH3-208ENST00000569036 MMP1P03956 469 aa13.46□□□□□ -0.25
CDH3-208ENST00000569036 ATF7P17544 494 aaPredicted RBP13.46□□□□□ -0.25
CDH3-208ENST00000569036 BMPR1AP36894 532 aa13.46□□□□□ -0.25
CDH3-208ENST00000569036 ACAP1Q15027 740 aa13.46□□□□□ -0.25
CDH3-208ENST00000569036 ADGRD2Q7Z7M1 963 aa13.46□□□□□ -0.25
CDH3-208ENST00000569036 EFHBQ8N7U6 833 aa13.46□□□□□ -0.25
CDH3-208ENST00000569036 KCNG4Q8TDN1 519 aa13.46□□□□□ -0.25
CDH3-208ENST00000569036 COPS5Q92905 334 aa13.46□□□□□ -0.25
CDH3-208ENST00000569036 WNT8BQ93098 351 aa13.46□□□□□ -0.25
CDH3-208ENST00000569036 TRERF1Q96PN7 1200 aa13.46□□□□□ -0.25
CDH3-208ENST00000569036 MYO10Q9HD67 2058 aa13.46□□□□□ -0.26
CDH3-208ENST00000569036 EMSYQ7Z589 1322 aa13.45□□□□□ -0.26
CDH3-208ENST00000569036 PNMA6EA0A0J9YXQ4 647 aa13.45□□□□□ -0.26
CDH3-208ENST00000569036 CAMK1Q14012 370 aa13.45□□□□□ -0.26
CDH3-208ENST00000569036 PPP2R5BQ15173 497 aa13.45□□□□□ -0.26
CDH3-208ENST00000569036 TKFCQ3LXA3 575 aa13.45□□□□□ -0.26
CDH3-208ENST00000569036 MUM1L1Q5H9M0 696 aa13.45□□□□□ -0.26
CDH3-208ENST00000569036 C12orf60Q5U649 245 aa13.45□□□□□ -0.26
CDH3-208ENST00000569036 FIBCD1Q8N539 461 aa13.45□□□□□ -0.26
CDH3-208ENST00000569036 KREMEN2Q8NCW0 462 aa13.45□□□□□ -0.26
CDH3-208ENST00000569036 SUSD6Q92537 303 aa13.45□□□□□ -0.26
CDH3-208ENST00000569036 NYAP2Q9P242 653 aa13.45□□□□□ -0.26
CDH3-208ENST00000569036 GTF2IRD1Q9UHL9 959 aa13.45□□□□□ -0.26
CDH3-208ENST00000569036 SETXQ7Z333 2677 aaKnown RBP13.45□□□□□ -0.26
CDH3-208ENST00000569036 NKRFO15226 690 aaKnown RBP eCLIP13.44□□□□□ -0.26
CDH3-208ENST00000569036 ALAS1P13196 640 aa13.44□□□□□ -0.26
CDH3-208ENST00000569036 PDE6AP16499 860 aa13.44□□□□□ -0.26
CDH3-208ENST00000569036 ALDH5A1P51649 535 aaPredicted RBP13.44□□□□□ -0.26
CDH3-208ENST00000569036 PTK7Q13308 1070 aa13.44□□□□□ -0.26
CDH3-208ENST00000569036 RSPO4Q2I0M5 234 aaPredicted RBP13.44□□□□□ -0.26
CDH3-208ENST00000569036 PLEKHG4Q58EX7 1191 aa13.44□□□□□ -0.26
CDH3-208ENST00000569036 UBALD2Q8IYN6 164 aa13.44□□□□□ -0.26
CDH3-208ENST00000569036 LRRC47Q8N1G4 583 aaKnown RBP13.44□□□□□ -0.26
CDH3-208ENST00000569036 KAT2BQ92831 832 aa13.44□□□□□ -0.26
CDH3-208ENST00000569036 PPP2R3CQ969Q6 453 aa13.44□□□□□ -0.26
CDH3-208ENST00000569036 IFIH1Q9BYX4 1025 aaKnown RBP13.44□□□□□ -0.26
CDH3-208ENST00000569036 LOC101059915A0A1B0GWI6 518 aaPredicted RBP13.43□□□□□ -0.26
CDH3-208ENST00000569036 PRKAB2O43741 272 aa13.43□□□□□ -0.26
CDH3-208ENST00000569036 BRD1O95696 1058 aa13.43□□□□□ -0.26
CDH3-208ENST00000569036 FDX1P10109 184 aa13.43□□□□□ -0.26
CDH3-208ENST00000569036 CLCN5P51795 746 aa13.43□□□□□ -0.26
CDH3-208ENST00000569036 MTMR3Q13615 1198 aa13.43□□□□□ -0.26
CDH3-208ENST00000569036 ANGPT1Q15389 498 aa13.43□□□□□ -0.26
CDH3-208ENST00000569036 NSMFQ6X4W1 530 aa13.43□□□□□ -0.26
CDH3-208ENST00000569036 IL17RAQ96F46 866 aa13.43□□□□□ -0.26
CDH3-208ENST00000569036 SEMA4AQ9H3S1 761 aa13.43□□□□□ -0.26
CDH3-208ENST00000569036 RWDD3Q9Y3V2 267 aa13.43□□□□□ -0.26
CDH3-208ENST00000569036 KIAA1671Q9BY89 1806 aa13.43□□□□□ -0.26
CDH3-208ENST00000569036 GPR179Q6PRD1 2367 aa13.43□□□□□ -0.26
CDH3-208ENST00000569036 ZNF532Q9HCE3 1301 aa13.42□□□□□ -0.26
CDH3-208ENST00000569036 GNAI3P08754 354 aa13.42□□□□□ -0.26
CDH3-208ENST00000569036 DNAJB1P25685 340 aa13.42□□□□□ -0.26
CDH3-208ENST00000569036 NRIP1P48552 1158 aa13.42□□□□□ -0.26
CDH3-208ENST00000569036 SLC9C2Q5TAH2 1124 aa13.42□□□□□ -0.26
CDH3-208ENST00000569036 CLP1Q92989 425 aaKnown RBP13.42□□□□□ -0.26
CDH3-208ENST00000569036 SMOC2Q9H3U7 446 aa13.42□□□□□ -0.26
CDH3-208ENST00000569036 ARMT1Q9H993 441 aa13.42□□□□□ -0.26
CDH3-208ENST00000569036 ATP8A2Q9NTI2 1148 aa13.42□□□□□ -0.26
CDH3-208ENST00000569036 SMC4Q9NTJ3 1288 aa13.42□□□□□ -0.26
CDH3-208ENST00000569036 HDAC6Q9UBN7 1215 aa13.42□□□□□ -0.26
CDH3-208ENST00000569036 SORCS3Q9UPU3 1222 aa13.42□□□□□ -0.26
CDH3-208ENST00000569036 ASPMQ8IZT6 3477 aa13.42□□□□□ -0.26
CDH3-208ENST00000569036 TCRBV5S4A2TA0A5A2 114 aa13.41□□□□□ -0.26
CDH3-208ENST00000569036 MMP3P08254 477 aa13.41□□□□□ -0.26
CDH3-208ENST00000569036 HOXB3P14651 431 aaPredicted RBP13.41□□□□□ -0.26
CDH3-208ENST00000569036 SP100P23497 879 aaPredicted RBP13.41□□□□□ -0.26
CDH3-208ENST00000569036 CWF19L1Q69YN2 538 aaKnown RBP13.41□□□□□ -0.26
CDH3-208ENST00000569036 RPAP2Q8IXW5 612 aaPredicted RBP13.41□□□□□ -0.26
CDH3-208ENST00000569036 AMOTL1Q8IY63 956 aa13.41□□□□□ -0.26
CDH3-208ENST00000569036 CCDC105Q8IYK2 499 aa13.41□□□□□ -0.26
CDH3-208ENST00000569036 CYP2W1Q8TAV3 490 aa13.41□□□□□ -0.26
CDH3-208ENST00000569036 SCFD2Q8WU76 684 aa13.41□□□□□ -0.26
CDH3-208ENST00000569036 HAUS7Q99871 368 aa13.41□□□□□ -0.26
CDH3-208ENST00000569036 HINFPQ9BQA5 517 aa13.41□□□□□ -0.26
CDH3-208ENST00000569036 CCDC8Q9H0W5 538 aaPredicted RBP13.41□□□□□ -0.26
CDH3-208ENST00000569036 MFSD1Q9H3U5 465 aa13.41□□□□□ -0.26
CDH3-208ENST00000569036 CLIP2Q9UDT6 1046 aa13.41□□□□□ -0.26
CDH3-208ENST00000569036 ADD3Q9UEY8 706 aaKnown RBP13.41□□□□□ -0.26
CDH3-208ENST00000569036 ADGRA3Q8IWK6 1321 aa13.4□□□□□ -0.26
CDH3-208ENST00000569036 LOC102724159A0A0B4J2E5 919 aa13.4□□□□□ -0.26
CDH3-208ENST00000569036 RSPH10B2B2RC85 870 aa13.4□□□□□ -0.26
CDH3-208ENST00000569036 ARIH2O95376 493 aa13.4□□□□□ -0.26
CDH3-208ENST00000569036 RSPH10BP0C881 870 aa13.4□□□□□ -0.26
CDH3-208ENST00000569036 ARP10275 920 aa13.4□□□□□ -0.26
CDH3-208ENST00000569036 TXNP10599 105 aaKnown RBP13.4□□□□□ -0.26
CDH3-208ENST00000569036 PDE4BQ07343 736 aa13.4□□□□□ -0.26
CDH3-208ENST00000569036 PWP2Q15269 919 aaKnown RBP13.4□□□□□ -0.26
CDH3-208ENST00000569036 ALDH1L2Q3SY69 923 aa13.4□□□□□ -0.26
CDH3-208ENST00000569036 RBM23Q86U06 439 aaKnown RBP13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms