RNA–Protein interactions for RNA: ENST00000568782.1

UBR1-207, Transcript of ubiquitin protein ligase E3 component n-recognin 1, human

TSL 3

Gene UBR1, Length 615 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBR1-207	ENST00000568782	DGKD	Q16760	1214 aa		11.94	□□□□□ -0.5
UBR1-207	ENST00000568782	LY6K	Q17RY6	165 aa		11.94	□□□□□ -0.5
UBR1-207	ENST00000568782	APOA5	Q6Q788	366 aa		11.94	□□□□□ -0.5
UBR1-207	ENST00000568782	SRBD1	Q8N5C6	995 aa	Known RBP	11.94	□□□□□ -0.5
UBR1-207	ENST00000568782	KATNAL1	Q9BW62	490 aa		11.94	□□□□□ -0.5
UBR1-207	ENST00000568782	PSTPIP2	Q9H939	334 aa		11.94	□□□□□ -0.5
UBR1-207	ENST00000568782	MLXIP	Q9HAP2	919 aa		11.94	□□□□□ -0.5
UBR1-207	ENST00000568782	KAT6A	Q92794	2004 aa		11.93	□□□□□ -0.5
UBR1-207	ENST00000568782	KLF18	A0A0U1RQI7	1052 aa		11.93	□□□□□ -0.5
UBR1-207	ENST00000568782	GOLGA8A	A7E2F4	631 aa		11.93	□□□□□ -0.5
UBR1-207	ENST00000568782	GOLGA8B	A8MQT2	603 aa		11.93	□□□□□ -0.5
UBR1-207	ENST00000568782	PLEKHA8P1	O95397	391 aa		11.93	□□□□□ -0.5
UBR1-207	ENST00000568782	HSPA4	P34932	840 aa		11.93	□□□□□ -0.5
UBR1-207	ENST00000568782	RCAN1	P53805	252 aa		11.93	□□□□□ -0.5
UBR1-207	ENST00000568782	PURA	Q00577	322 aa	Known RBP	11.93	□□□□□ -0.5
UBR1-207	ENST00000568782	EXOSC10	Q01780	885 aa	Known RBP	11.93	□□□□□ -0.5
UBR1-207	ENST00000568782	MFSD5	Q6N075	450 aa		11.93	□□□□□ -0.5
UBR1-207	ENST00000568782	GPR153	Q6NV75	609 aa		11.93	□□□□□ -0.5
UBR1-207	ENST00000568782	XRRA1	Q6P2D8	792 aa		11.93	□□□□□ -0.5
UBR1-207	ENST00000568782	TMTC3	Q6ZXV5	915 aa		11.93	□□□□□ -0.5
UBR1-207	ENST00000568782	HEATR3	Q7Z4Q2	680 aa		11.93	□□□□□ -0.5
UBR1-207	ENST00000568782	NLRX1	Q86UT6	975 aa		11.93	□□□□□ -0.5
UBR1-207	ENST00000568782	VSIG10L	Q86VR7	867 aa		11.93	□□□□□ -0.5
UBR1-207	ENST00000568782	RAB11FIP4	Q86YS3	637 aa		11.93	□□□□□ -0.5
UBR1-207	ENST00000568782	FAM126B	Q8IXS8	530 aa		11.93	□□□□□ -0.5
UBR1-207	ENST00000568782	RASEF	Q8IZ41	740 aa		11.93	□□□□□ -0.5
UBR1-207	ENST00000568782	CMTR1	Q8N1G2	835 aa	Known RBP	11.93	□□□□□ -0.5
UBR1-207	ENST00000568782	COPS5	Q92905	334 aa		11.93	□□□□□ -0.5
UBR1-207	ENST00000568782	PPP1R12C	Q9BZL4	782 aa		11.93	□□□□□ -0.5
UBR1-207	ENST00000568782	GLT8D2	Q9H1C3	349 aa		11.93	□□□□□ -0.5
UBR1-207	ENST00000568782	MTIF3	Q9H2K0	278 aa	Known RBP	11.93	□□□□□ -0.5
UBR1-207	ENST00000568782	HIPK3	Q9H422	1215 aa		11.93	□□□□□ -0.5
UBR1-207	ENST00000568782	PCDH10	Q9P2E7	1040 aa		11.93	□□□□□ -0.5
UBR1-207	ENST00000568782	DDX41	Q9UJV9	622 aa	Known RBP	11.93	□□□□□ -0.5
UBR1-207	ENST00000568782	hCG_1984214	I3L0E3	225 aa		11.92	□□□□□ -0.5
UBR1-207	ENST00000568782	PIK3CD	O00329	1044 aa		11.92	□□□□□ -0.5
UBR1-207	ENST00000568782	NOP56	O00567	594 aa	Known RBP	11.92	□□□□□ -0.5
UBR1-207	ENST00000568782	OPLAH	O14841	1288 aa		11.92	□□□□□ -0.5
UBR1-207	ENST00000568782	METAP2	P50579	478 aa	Known RBP eCLIP	11.92	□□□□□ -0.5
UBR1-207	ENST00000568782	PSMC6	P62333	389 aa		11.92	□□□□□ -0.5
UBR1-207	ENST00000568782	PTPN11	Q06124	597 aa	Predicted RBP	11.92	□□□□□ -0.5
UBR1-207	ENST00000568782	NEDD9	Q14511	834 aa		11.92	□□□□□ -0.5
UBR1-207	ENST00000568782	ADCK5	Q3MIX3	580 aa		11.92	□□□□□ -0.5
UBR1-207	ENST00000568782	TMEM63B	Q5T3F8	832 aa		11.92	□□□□□ -0.5
UBR1-207	ENST00000568782	NFRKB	Q6P4R8	1299 aa		11.92	□□□□□ -0.5
UBR1-207	ENST00000568782	CCDC62	Q6P9F0	684 aa		11.92	□□□□□ -0.5
UBR1-207	ENST00000568782		Q6ZUG5	572 aa		11.92	□□□□□ -0.5
UBR1-207	ENST00000568782	RPUSD2	Q8IZ73	545 aa	Known RBP	11.92	□□□□□ -0.5
UBR1-207	ENST00000568782	CCDC155	Q8N6L0	562 aa		11.92	□□□□□ -0.5
UBR1-207	ENST00000568782	ZNF713	Q8N859	430 aa	Predicted RBP	11.92	□□□□□ -0.5
UBR1-207	ENST00000568782	SLC43A3	Q8NBI5	491 aa		11.92	□□□□□ -0.5
UBR1-207	ENST00000568782	RETREG2	Q8NC44	543 aa		11.92	□□□□□ -0.5
UBR1-207	ENST00000568782	GIMAP8	Q8ND71	665 aa	Predicted RBP	11.92	□□□□□ -0.5
UBR1-207	ENST00000568782	CCDC12	Q8WUD4	166 aa	Predicted RBP	11.92	□□□□□ -0.5
UBR1-207	ENST00000568782	AFG1L	Q8WV93	481 aa		11.92	□□□□□ -0.5
UBR1-207	ENST00000568782	CDHR1	Q96JP9	859 aa		11.92	□□□□□ -0.5
UBR1-207	ENST00000568782	RNPC3	Q96LT9	517 aa	Known RBP	11.92	□□□□□ -0.5
UBR1-207	ENST00000568782	TCEANC2	Q96MN5	208 aa		11.92	□□□□□ -0.5
UBR1-207	ENST00000568782	SPATA33	Q96N06	139 aa		11.92	□□□□□ -0.5
UBR1-207	ENST00000568782	PPFIA4	O75335	1185 aa		11.91	□□□□□ -0.5
UBR1-207	ENST00000568782	ARIH2	O95376	493 aa		11.91	□□□□□ -0.5
UBR1-207	ENST00000568782	CD4	P01730	458 aa		11.91	□□□□□ -0.5
UBR1-207	ENST00000568782	MMP3	P08254	477 aa		11.91	□□□□□ -0.5
UBR1-207	ENST00000568782	NAPA	P54920	295 aa		11.91	□□□□□ -0.5
UBR1-207	ENST00000568782	SHH	Q15465	462 aa		11.91	□□□□□ -0.5
UBR1-207	ENST00000568782	NBPF20	Q3BBV1	942 aa		11.91	□□□□□ -0.5
UBR1-207	ENST00000568782	USP17L6P	Q6QN14	398 aa		11.91	□□□□□ -0.5
UBR1-207	ENST00000568782	TEX2	Q8IWB9	1127 aa		11.91	□□□□□ -0.5
UBR1-207	ENST00000568782	C7orf31	Q8N865	590 aa		11.91	□□□□□ -0.5
UBR1-207	ENST00000568782	PPTC7	Q8NI37	304 aa		11.91	□□□□□ -0.5
UBR1-207	ENST00000568782	BRF1	Q92994	677 aa		11.91	□□□□□ -0.5
UBR1-207	ENST00000568782	ALDH8A1	Q9H2A2	487 aa	Predicted RBP	11.91	□□□□□ -0.5
UBR1-207	ENST00000568782	TBX21	Q9UL17	535 aa		11.91	□□□□□ -0.5
UBR1-207	ENST00000568782	SNX14	Q9Y5W7	946 aa		11.91	□□□□□ -0.5
UBR1-207	ENST00000568782	CYP46A1	Q9Y6A2	500 aa		11.91	□□□□□ -0.5
UBR1-207	ENST00000568782	TRIP12	Q14669	1992 aa	Predicted RBP	11.9	□□□□□ -0.5
UBR1-207	ENST00000568782	SCN10A	Q9Y5Y9	1956 aa		11.9	□□□□□ -0.5
UBR1-207	ENST00000568782	FIBP	O43427	364 aa		11.9	□□□□□ -0.5
UBR1-207	ENST00000568782	B4GALT4	O60513	344 aa		11.9	□□□□□ -0.5
UBR1-207	ENST00000568782	GGPS1	O95749	300 aa		11.9	□□□□□ -0.5
UBR1-207	ENST00000568782	PTGS1	P23219	599 aa		11.9	□□□□□ -0.5
UBR1-207	ENST00000568782	RPS6KB1	P23443	525 aa		11.9	□□□□□ -0.5
UBR1-207	ENST00000568782	ARHGAP1	Q07960	439 aa		11.9	□□□□□ -0.5
UBR1-207	ENST00000568782	BFSP2	Q13515	415 aa		11.9	□□□□□ -0.5
UBR1-207	ENST00000568782	SLC35G1	Q2M3R5	365 aa		11.9	□□□□□ -0.5
UBR1-207	ENST00000568782	CELF3	Q5SZQ8	465 aa	Known RBP	11.9	□□□□□ -0.5
UBR1-207	ENST00000568782	PCNX4	Q63HM2	1172 aa		11.9	□□□□□ -0.5
UBR1-207	ENST00000568782	PSRC1	Q6PGN9	363 aa	Predicted RBP	11.9	□□□□□ -0.5
UBR1-207	ENST00000568782	EMID1	Q96A84	441 aa	Predicted RBP	11.9	□□□□□ -0.5
UBR1-207	ENST00000568782	LRCH3	Q96II8	777 aa		11.9	□□□□□ -0.5
UBR1-207	ENST00000568782	TRPV6	Q9H1D0	765 aa		11.9	□□□□□ -0.5
UBR1-207	ENST00000568782	RTEL1	Q9NZ71	1219 aa		11.9	□□□□□ -0.5
UBR1-207	ENST00000568782		V9GY48	417 aa	Predicted RBP	11.9	□□□□□ -0.5
UBR1-207	ENST00000568782	hCG_1642624	A0A1W2PR95	340 aa		11.89	□□□□□ -0.51
UBR1-207	ENST00000568782	MEIS2	O14770	477 aa		11.89	□□□□□ -0.51
UBR1-207	ENST00000568782	FOS	P01100	380 aa	Predicted RBP	11.89	□□□□□ -0.51
UBR1-207	ENST00000568782	FGB	P02675	491 aa		11.89	□□□□□ -0.51
UBR1-207	ENST00000568782	CYP2C18	P33260	490 aa		11.89	□□□□□ -0.51
UBR1-207	ENST00000568782	ADCY7	P51828	1080 aa		11.89	□□□□□ -0.51
UBR1-207	ENST00000568782	APOBR	Q0VD83	1088 aa		11.89	□□□□□ -0.51

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