RNA–Protein interactions for RNA: ENST00000568477.5

CMTM3-215, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 3 BASIC

Gene CMTM3, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-215ENST00000568477 SUPT20HL2P0C7V6 817 aa16.68■□□□□ 0.26
CMTM3-215ENST00000568477 CSF2RAP15509 400 aa16.68■□□□□ 0.26
CMTM3-215ENST00000568477 RXRAP19793 462 aa16.68■□□□□ 0.26
CMTM3-215ENST00000568477 CCND2P30279 289 aa16.68■□□□□ 0.26
CMTM3-215ENST00000568477 SMAD3P84022 425 aaKnown RBP16.68■□□□□ 0.26
CMTM3-215ENST00000568477 PGM5Q15124 567 aa16.68■□□□□ 0.26
CMTM3-215ENST00000568477 NBPF20Q3BBV1 942 aa16.68■□□□□ 0.26
CMTM3-215ENST00000568477 FAM47CQ5HY64 1035 aa16.68■□□□□ 0.26
CMTM3-215ENST00000568477 FAM109BQ6ICB4 259 aaPredicted RBP16.68■□□□□ 0.26
CMTM3-215ENST00000568477 VSIG10LQ86VR7 867 aa16.68■□□□□ 0.26
CMTM3-215ENST00000568477 SGMS1Q86VZ5 419 aa16.68■□□□□ 0.26
CMTM3-215ENST00000568477 NOC4LQ9BVI4 516 aaKnown RBP16.68■□□□□ 0.26
CMTM3-215ENST00000568477 DDX41Q9UJV9 622 aaKnown RBP16.68■□□□□ 0.26
CMTM3-215ENST00000568477 KIAA1217Q5T5P2 1943 aa16.68■□□□□ 0.26
CMTM3-215ENST00000568477 MMP3P08254 477 aa16.67■□□□□ 0.26
CMTM3-215ENST00000568477 KRT32Q14532 448 aa16.67■□□□□ 0.26
CMTM3-215ENST00000568477 NFRKBQ6P4R8 1299 aa16.67■□□□□ 0.26
CMTM3-215ENST00000568477 PSRC1Q6PGN9 363 aaPredicted RBP16.67■□□□□ 0.26
CMTM3-215ENST00000568477 KCNV1Q6PIU1 500 aa16.67■□□□□ 0.26
CMTM3-215ENST00000568477 SYNE3Q6ZMZ3 975 aa16.67■□□□□ 0.26
CMTM3-215ENST00000568477 MICU3Q86XE3 530 aa16.67■□□□□ 0.26
CMTM3-215ENST00000568477 RAB11FIP4Q86YS3 637 aa16.67■□□□□ 0.26
CMTM3-215ENST00000568477 SRBD1Q8N5C6 995 aaKnown RBP16.67■□□□□ 0.26
CMTM3-215ENST00000568477 IL31RAQ8NI17 732 aa16.67■□□□□ 0.26
CMTM3-215ENST00000568477 CUL5Q93034 780 aa16.67■□□□□ 0.26
CMTM3-215ENST00000568477 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.67■□□□□ 0.262e-6■■□□□ 14.2
CMTM3-215ENST00000568477 TRMT13Q9NUP7 481 aaKnown RBP16.67■□□□□ 0.26
CMTM3-215ENST00000568477 MTMR10Q9NXD2 777 aa16.67■□□□□ 0.26
CMTM3-215ENST00000568477 CASTP20810 708 aaKnown RBP16.66■□□□□ 0.26
CMTM3-215ENST00000568477 PTPN11Q06124 597 aaPredicted RBP16.66■□□□□ 0.26
CMTM3-215ENST00000568477 LAMC2Q13753 1193 aa16.66■□□□□ 0.26
CMTM3-215ENST00000568477 TSGA10IPQ3SY00 556 aa16.66■□□□□ 0.26
CMTM3-215ENST00000568477 ZNF697Q5TEC3 545 aa16.66■□□□□ 0.26
CMTM3-215ENST00000568477 DHX32Q7L7V1 743 aaKnown RBP16.66■□□□□ 0.26
CMTM3-215ENST00000568477 DHX37Q8IY37 1157 aaKnown RBP16.66■□□□□ 0.26
CMTM3-215ENST00000568477 RASEFQ8IZ41 740 aa16.66■□□□□ 0.26
CMTM3-215ENST00000568477 CMTR1Q8N1G2 835 aaKnown RBP16.66■□□□□ 0.26
CMTM3-215ENST00000568477 FANCBQ8NB91 859 aa16.66■□□□□ 0.26
CMTM3-215ENST00000568477 EMID1Q96A84 441 aaPredicted RBP16.66■□□□□ 0.26
CMTM3-215ENST00000568477 IL23AQ9NPF7 189 aa16.66■□□□□ 0.26
CMTM3-215ENST00000568477 UMODL1Q5DID0 1318 aa16.66■□□□□ 0.26
CMTM3-215ENST00000568477 RGS20O76081 388 aa16.65■□□□□ 0.26
CMTM3-215ENST00000568477 CCL23P55773 120 aa16.65■□□□□ 0.26
CMTM3-215ENST00000568477 CHMP4BP1P59074 171 aa16.65■□□□□ 0.26
CMTM3-215ENST00000568477 DGKDQ16760 1214 aa16.65■□□□□ 0.26
CMTM3-215ENST00000568477 TMEM240Q5SV17 173 aa16.65■□□□□ 0.26
CMTM3-215ENST00000568477 APOA5Q6Q788 366 aa16.65■□□□□ 0.26
CMTM3-215ENST00000568477 TMTC3Q6ZXV5 915 aa16.65■□□□□ 0.26
CMTM3-215ENST00000568477 C16orf59Q7L2K0 433 aa16.65■□□□□ 0.26
CMTM3-215ENST00000568477 SMARCC2Q8TAQ2 1214 aa16.65■□□□□ 0.26
CMTM3-215ENST00000568477 FRMPD4Q14CM0 1322 aa16.65■□□□□ 0.26
CMTM3-215ENST00000568477 LAMA2P24043 3122 aaKnown RBP16.64■□□□□ 0.25
CMTM3-215ENST00000568477 HMGB1P09429 215 aaKnown RBP16.64■□□□□ 0.25
CMTM3-215ENST00000568477 ACRP10323 421 aa16.64■□□□□ 0.25
CMTM3-215ENST00000568477 TGFB3P10600 412 aa16.64■□□□□ 0.25
CMTM3-215ENST00000568477 CYP2C9P11712 490 aa16.64■□□□□ 0.25
CMTM3-215ENST00000568477 EXOSC10Q01780 885 aaKnown RBP16.64■□□□□ 0.25
CMTM3-215ENST00000568477 ADCK5Q3MIX3 580 aa16.64■□□□□ 0.25
CMTM3-215ENST00000568477 GNPTABQ3T906 1256 aa16.64■□□□□ 0.25
CMTM3-215ENST00000568477 ZNF365Q70YC5 407 aa16.64■□□□□ 0.25
CMTM3-215ENST00000568477 PPTC7Q8NI37 304 aa16.64■□□□□ 0.25
CMTM3-215ENST00000568477 PPP1R13LQ8WUF5 828 aa16.64■□□□□ 0.25
CMTM3-215ENST00000568477 TCEANC2Q96MN5 208 aa16.64■□□□□ 0.25
CMTM3-215ENST00000568477 WNT8AQ9H1J5 351 aa16.64■□□□□ 0.25
CMTM3-215ENST00000568477 NOD1Q9Y239 953 aa16.64■□□□□ 0.25
CMTM3-215ENST00000568477 HSFX4A0A1B0GTS1 333 aaPredicted RBP16.63■□□□□ 0.25
CMTM3-215ENST00000568477 HSFX3A0A1B0GWH4 333 aaPredicted RBP16.63■□□□□ 0.25
CMTM3-215ENST00000568477 PIK3CDO00329 1044 aa16.63■□□□□ 0.25
CMTM3-215ENST00000568477 STAM2O75886 525 aa16.63■□□□□ 0.25
CMTM3-215ENST00000568477 GGPS1O95749 300 aa16.63■□□□□ 0.25
CMTM3-215ENST00000568477 UBA1P22314 1058 aaKnown RBP16.63■□□□□ 0.25
CMTM3-215ENST00000568477 CELF3Q5SZQ8 465 aaKnown RBP16.63■□□□□ 0.25
CMTM3-215ENST00000568477 USP17L6PQ6QN14 398 aa16.63■□□□□ 0.25
CMTM3-215ENST00000568477 CCDC82Q8N4S0 544 aa16.63■□□□□ 0.25
CMTM3-215ENST00000568477 KAT2BQ92831 832 aa16.63■□□□□ 0.25
CMTM3-215ENST00000568477 ZFP91Q96JP5 570 aaPredicted RBP16.63■□□□□ 0.25
CMTM3-215ENST00000568477 FAM161BQ96MY7 647 aa16.63■□□□□ 0.25
CMTM3-215ENST00000568477 MTIF3Q9H2K0 278 aaKnown RBP16.63■□□□□ 0.25
CMTM3-215ENST00000568477 RBM28Q9NW13 759 aaKnown RBP16.63■□□□□ 0.25
CMTM3-215ENST00000568477 STXBP5LQ9Y2K9 1186 aa16.63■□□□□ 0.25
CMTM3-215ENST00000568477 hCG_1642624A0A1W2PR95 340 aa16.62■□□□□ 0.25
CMTM3-215ENST00000568477 MEIS2O14770 477 aa16.62■□□□□ 0.25
CMTM3-215ENST00000568477 ZBTB43O43298 467 aa16.62■□□□□ 0.25
CMTM3-215ENST00000568477 FGBP02675 491 aa16.62■□□□□ 0.25
CMTM3-215ENST00000568477 MRPS9P82933 396 aaKnown RBP16.62■□□□□ 0.25
CMTM3-215ENST00000568477 RTN1Q16799 776 aa16.62■□□□□ 0.25
CMTM3-215ENST00000568477 RASIP1Q5U651 963 aa16.62■□□□□ 0.25
CMTM3-215ENST00000568477 MYSM1Q5VVJ2 828 aa16.62■□□□□ 0.25
CMTM3-215ENST00000568477 RPUSD2Q8IZ73 545 aaKnown RBP16.62■□□□□ 0.25
CMTM3-215ENST00000568477 SCLYQ96I15 445 aa16.62■□□□□ 0.25
CMTM3-215ENST00000568477 SPATA33Q96N06 139 aa16.62■□□□□ 0.25
CMTM3-215ENST00000568477 INPP4AQ96PE3 977 aaPredicted RBP16.62■□□□□ 0.25
CMTM3-215ENST00000568477 KATNAL1Q9BW62 490 aa16.62■□□□□ 0.25
CMTM3-215ENST00000568477 PSTPIP2Q9H939 334 aa16.62■□□□□ 0.25
CMTM3-215ENST00000568477 BRPF3Q9ULD4 1205 aa16.62■□□□□ 0.25
CMTM3-215ENST00000568477 TMEM265A0A087WTH1 108 aa16.61■□□□□ 0.25
CMTM3-215ENST00000568477 KLF18A0A0U1RQI7 1052 aa16.61■□□□□ 0.25
CMTM3-215ENST00000568477 SORBS3O60504 671 aa16.61■□□□□ 0.25
CMTM3-215ENST00000568477 PPFIA4O75335 1185 aa16.61■□□□□ 0.25
CMTM3-215ENST00000568477 REC8O95072 547 aa16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms