RNA–Protein interactions for RNA: ENST00000568358.1

HERPUD1-213, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 5

Gene HERPUD1, Length 751 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-213ENST00000568358 SALL3Q9BXA9 1300 aa5.46□□□□□ -1.54
HERPUD1-213ENST00000568358 LOC102724159A0A0B4J2E5 919 aa5.45□□□□□ -1.54
HERPUD1-213ENST00000568358 A0A0D9SFI3 127 aa5.45□□□□□ -1.54
HERPUD1-213ENST00000568358 HSFX4A0A1B0GTS1 333 aaPredicted RBP5.45□□□□□ -1.54
HERPUD1-213ENST00000568358 HSFX3A0A1B0GWH4 333 aaPredicted RBP5.45□□□□□ -1.54
HERPUD1-213ENST00000568358 DHX16O60231 1041 aaKnown RBP5.45□□□□□ -1.54
HERPUD1-213ENST00000568358 CALML3P27482 149 aa5.45□□□□□ -1.54
HERPUD1-213ENST00000568358 SLC16A2P36021 539 aa5.45□□□□□ -1.54
HERPUD1-213ENST00000568358 CPT1AP50416 773 aa5.45□□□□□ -1.54
HERPUD1-213ENST00000568358 SNAP25P60880 206 aa5.45□□□□□ -1.54
HERPUD1-213ENST00000568358 NUCB1Q02818 461 aa5.45□□□□□ -1.54
HERPUD1-213ENST00000568358 FAAP100Q0VG06 881 aa5.45□□□□□ -1.54
HERPUD1-213ENST00000568358 TRDNQ13061 729 aa5.45□□□□□ -1.54
HERPUD1-213ENST00000568358 ITGA7Q13683 1181 aa5.45□□□□□ -1.54
HERPUD1-213ENST00000568358 BAATQ14032 418 aaPredicted RBP5.45□□□□□ -1.54
HERPUD1-213ENST00000568358 PWP2Q15269 919 aaKnown RBP5.45□□□□□ -1.54
HERPUD1-213ENST00000568358 FSCN1Q16658 493 aaKnown RBP5.45□□□□□ -1.54
HERPUD1-213ENST00000568358 IMMTQ16891 758 aaKnown RBP5.45□□□□□ -1.54
HERPUD1-213ENST00000568358 MUM1L1Q5H9M0 696 aa5.45□□□□□ -1.54
HERPUD1-213ENST00000568358 GPATCH4Q5T3I0 446 aaKnown RBP5.45□□□□□ -1.54
HERPUD1-213ENST00000568358 TTBK2Q6IQ55 1244 aa5.45□□□□□ -1.54
HERPUD1-213ENST00000568358 BTNL9Q6UXG8 535 aa5.45□□□□□ -1.54
HERPUD1-213ENST00000568358 RNF207Q6ZRF8 634 aa5.45□□□□□ -1.54
HERPUD1-213ENST00000568358 EEPD1Q7L9B9 569 aa5.45□□□□□ -1.54
HERPUD1-213ENST00000568358 DGKHQ86XP1 1220 aa5.45□□□□□ -1.54
HERPUD1-213ENST00000568358 PLEKHM2Q8IWE5 1019 aa5.45□□□□□ -1.54
HERPUD1-213ENST00000568358 SMC5Q8IY18 1101 aa5.45□□□□□ -1.54
HERPUD1-213ENST00000568358 RPUSD2Q8IZ73 545 aaKnown RBP5.45□□□□□ -1.54
HERPUD1-213ENST00000568358 TTC13Q8NBP0 860 aa5.45□□□□□ -1.54
HERPUD1-213ENST00000568358 RUFY2Q8WXA3 655 aa5.45□□□□□ -1.54
HERPUD1-213ENST00000568358 LENG1Q96BZ8 264 aaPredicted RBP5.45□□□□□ -1.54
HERPUD1-213ENST00000568358 FAM161BQ96MY7 647 aa5.45□□□□□ -1.54
HERPUD1-213ENST00000568358 UBAC1Q9BSL1 405 aa5.45□□□□□ -1.54
HERPUD1-213ENST00000568358 KRT23Q9C075 422 aa5.45□□□□□ -1.54
HERPUD1-213ENST00000568358 UPF3AQ9H1J1 476 aaKnown RBP5.45□□□□□ -1.54
HERPUD1-213ENST00000568358 RANBP17Q9H2T7 1088 aaKnown RBP5.45□□□□□ -1.54
HERPUD1-213ENST00000568358 OSBPL3Q9H4L5 887 aa5.45□□□□□ -1.54
HERPUD1-213ENST00000568358 CNNM2Q9H8M5 875 aa5.45□□□□□ -1.54
HERPUD1-213ENST00000568358 VTA1Q9NP79 307 aa5.45□□□□□ -1.54
HERPUD1-213ENST00000568358 LTBP2Q14767 1821 aa5.45□□□□□ -1.54
HERPUD1-213ENST00000568358 ZNF536O15090 1300 aa5.45□□□□□ -1.54
HERPUD1-213ENST00000568358 TRIP12Q14669 1992 aaPredicted RBP5.44□□□□□ -1.54
HERPUD1-213ENST00000568358 ERICH2A1L162 156 aa5.44□□□□□ -1.54
HERPUD1-213ENST00000568358 ANKRD62A6NC57 917 aa5.44□□□□□ -1.54
HERPUD1-213ENST00000568358 SOWAHBA6NEL2 793 aa5.44□□□□□ -1.54
HERPUD1-213ENST00000568358 NKRFO15226 690 aaKnown RBP eCLIP5.44□□□□□ -1.54
HERPUD1-213ENST00000568358 KPNA6O60684 536 aa5.44□□□□□ -1.54
HERPUD1-213ENST00000568358 KDM4AO75164 1064 aa5.44□□□□□ -1.54
HERPUD1-213ENST00000568358 PARP1P09874 1014 aaKnown RBP5.44□□□□□ -1.54
HERPUD1-213ENST00000568358 SUPT20HL2P0C7V6 817 aa5.44□□□□□ -1.54
HERPUD1-213ENST00000568358 PDHBP11177 359 aa5.44□□□□□ -1.54
HERPUD1-213ENST00000568358 SMPD1P17405 629 aa5.44□□□□□ -1.54
HERPUD1-213ENST00000568358 NOVP48745 357 aa5.44□□□□□ -1.54
HERPUD1-213ENST00000568358 CDK7P50613 346 aa5.44□□□□□ -1.54
HERPUD1-213ENST00000568358 ALDH5A1P51649 535 aaPredicted RBP5.44□□□□□ -1.54
HERPUD1-213ENST00000568358 BEX3Q00994 111 aa5.44□□□□□ -1.54
HERPUD1-213ENST00000568358 ZNF543Q08ER8 600 aa5.44□□□□□ -1.54
HERPUD1-213ENST00000568358 TRAF1Q13077 416 aa5.44□□□□□ -1.54
HERPUD1-213ENST00000568358 QPCTQ16769 361 aa5.44□□□□□ -1.54
HERPUD1-213ENST00000568358 USH1GQ495M9 461 aa5.44□□□□□ -1.54
HERPUD1-213ENST00000568358 DUSP28Q4G0W2 176 aa5.44□□□□□ -1.54
HERPUD1-213ENST00000568358 C9orf50Q5SZB4 431 aa5.44□□□□□ -1.54
HERPUD1-213ENST00000568358 TMEM164Q5U3C3 297 aa5.44□□□□□ -1.54
HERPUD1-213ENST00000568358 CCSAPQ6IQ19 270 aaPredicted RBP5.44□□□□□ -1.54
HERPUD1-213ENST00000568358 MFSD5Q6N075 450 aa5.44□□□□□ -1.54
HERPUD1-213ENST00000568358 CXCL17Q6UXB2 119 aa5.44□□□□□ -1.54
HERPUD1-213ENST00000568358 ZNF589Q86UQ0 364 aaPredicted RBP5.44□□□□□ -1.54
HERPUD1-213ENST00000568358 MCF2L2Q86YR7 1114 aa5.44□□□□□ -1.54
HERPUD1-213ENST00000568358 FBXO16Q8IX29 292 aaPredicted RBP5.44□□□□□ -1.54
HERPUD1-213ENST00000568358 PNMA1Q8ND90 353 aa5.44□□□□□ -1.54
HERPUD1-213ENST00000568358 DNERQ8NFT8 737 aa5.44□□□□□ -1.54
HERPUD1-213ENST00000568358 PRR7Q8TB68 274 aa5.44□□□□□ -1.54
HERPUD1-213ENST00000568358 KAT6AQ92794 2004 aa5.44□□□□□ -1.54
HERPUD1-213ENST00000568358 ZSCAN10Q96SZ4 725 aaPredicted RBP5.44□□□□□ -1.54
HERPUD1-213ENST00000568358 ZKSCAN3Q9BRR0 538 aa5.44□□□□□ -1.54
HERPUD1-213ENST00000568358 DSCC1Q9BVC3 393 aa5.44□□□□□ -1.54
HERPUD1-213ENST00000568358 WDR11Q9BZH6 1224 aa5.44□□□□□ -1.54
HERPUD1-213ENST00000568358 MAF1Q9H063 256 aa5.44□□□□□ -1.54
HERPUD1-213ENST00000568358 SEMA6BQ9H3T3 888 aa5.44□□□□□ -1.54
HERPUD1-213ENST00000568358 MSRAQ9UJ68 235 aa5.44□□□□□ -1.54
HERPUD1-213ENST00000568358 ADGRG1Q9Y653 693 aa5.44□□□□□ -1.54
HERPUD1-213ENST00000568358 RANBP2P49792 3224 aaKnown RBP5.44□□□□□ -1.54
HERPUD1-213ENST00000568358 SZT2Q5T011 3432 aa5.43□□□□□ -1.54
HERPUD1-213ENST00000568358 KIAA1217Q5T5P2 1943 aa5.43□□□□□ -1.54
HERPUD1-213ENST00000568358 TMEM265A0A087WTH1 108 aa5.43□□□□□ -1.54
HERPUD1-213ENST00000568358 C11orf97A0A1B0GVM6 126 aaPredicted RBP5.43□□□□□ -1.54
HERPUD1-213ENST00000568358 MYADML2A6NDP7 307 aa5.43□□□□□ -1.54
HERPUD1-213ENST00000568358 B4E1Z4 1266 aa5.43□□□□□ -1.54
HERPUD1-213ENST00000568358 FOXP2O15409 715 aa5.43□□□□□ -1.54
HERPUD1-213ENST00000568358 IGHDP01880 384 aa5.43□□□□□ -1.54
HERPUD1-213ENST00000568358 FGBP02675 491 aa5.43□□□□□ -1.54
HERPUD1-213ENST00000568358 MYL3P08590 195 aa5.43□□□□□ -1.54
HERPUD1-213ENST00000568358 GOLGA8HP0CJ92 632 aa5.43□□□□□ -1.54
HERPUD1-213ENST00000568358 RPS6P62753 249 aaKnown RBP5.43□□□□□ -1.54
HERPUD1-213ENST00000568358 NKX3-2P78367 333 aa5.43□□□□□ -1.54
HERPUD1-213ENST00000568358 TTLL4Q14679 1199 aa5.43□□□□□ -1.54
HERPUD1-213ENST00000568358 COL19A1Q14993 1142 aa5.43□□□□□ -1.54
HERPUD1-213ENST00000568358 SART3Q15020 963 aaKnown RBP5.43□□□□□ -1.54
HERPUD1-213ENST00000568358 PPP2R5BQ15173 497 aa5.43□□□□□ -1.54
HERPUD1-213ENST00000568358 ASPRV1Q53RT3 343 aa5.43□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms