RNA–Protein interactions for RNA: ENST00000568339.5

COX4I1-215, Transcript of cytochrome c oxidase subunit 4I1, humanhuman

TSL 2

Gene COX4I1, Length 2,271 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COX4I1-215ENST00000568339 USH1GQ495M9 461 aa18.75■□□□□ 0.59
COX4I1-215ENST00000568339 Q4G0T1 1027 aa18.75■□□□□ 0.59
COX4I1-215ENST00000568339 TMEM119Q4V9L6 283 aa18.75■□□□□ 0.59
COX4I1-215ENST00000568339 HYIQ5T013 277 aa18.75■□□□□ 0.59
COX4I1-215ENST00000568339 VSTM4Q8IW00 320 aa18.75■□□□□ 0.59
COX4I1-215ENST00000568339 CCDC150Q8NCX0 1101 aa18.75■□□□□ 0.59
COX4I1-215ENST00000568339 PPP1R13BQ96KQ4 1090 aa18.75■□□□□ 0.59
COX4I1-215ENST00000568339 CYP3A4P08684 503 aa18.75■□□□□ 0.59
COX4I1-215ENST00000568339 KIF4BQ2VIQ3 1234 aa18.75■□□□□ 0.59
COX4I1-215ENST00000568339 KRT79Q5XKE5 535 aa18.75■□□□□ 0.59
COX4I1-215ENST00000568339 CNNM4Q6P4Q7 775 aa18.75■□□□□ 0.59
COX4I1-215ENST00000568339 SAMD7Q7Z3H4 446 aa18.75■□□□□ 0.59
COX4I1-215ENST00000568339 TMC6Q7Z403 805 aa18.75■□□□□ 0.59
COX4I1-215ENST00000568339 SMYD4Q8IYR2 804 aaPredicted RBP18.75■□□□□ 0.59
COX4I1-215ENST00000568339 NLGN2Q8NFZ4 835 aa18.75■□□□□ 0.59
COX4I1-215ENST00000568339 DEFB129Q9H1M3 183 aa18.75■□□□□ 0.59
COX4I1-215ENST00000568339 SAMSN1Q9NSI8 373 aaKnown RBP18.75■□□□□ 0.59
COX4I1-215ENST00000568339 BLOC1S4Q9NUP1 217 aa18.75■□□□□ 0.59
COX4I1-215ENST00000568339 HACL1Q9UJ83 578 aa18.75■□□□□ 0.59
COX4I1-215ENST00000568339 DOCK1Q14185 1865 aa18.75■□□□□ 0.59
COX4I1-215ENST00000568339 SPDYE3A6NKU9 549 aa18.74■□□□□ 0.59
COX4I1-215ENST00000568339 SLFN12Q8IYM2 578 aa18.74■□□□□ 0.59
COX4I1-215ENST00000568339 ADSSL1Q8N142 457 aa18.74■□□□□ 0.59
COX4I1-215ENST00000568339 GIMAP8Q8ND71 665 aaPredicted RBP18.74■□□□□ 0.59
COX4I1-215ENST00000568339 LPAR1Q92633 364 aa18.74■□□□□ 0.59
COX4I1-215ENST00000568339 PLIN2Q99541 437 aa18.74■□□□□ 0.59
COX4I1-215ENST00000568339 INTS13Q9NVM9 706 aa18.74■□□□□ 0.59
COX4I1-215ENST00000568339 PCDHA12Q9UN75 941 aa18.74■□□□□ 0.59
COX4I1-215ENST00000568339 GOLGB1Q14789 3259 aaKnown RBP18.74■□□□□ 0.59
COX4I1-215ENST00000568339 POTEMA6NI47 508 aa18.74■□□□□ 0.59
COX4I1-215ENST00000568339 HOXA7P31268 230 aaPredicted RBP18.74■□□□□ 0.59
COX4I1-215ENST00000568339 PAK1Q13153 545 aa18.74■□□□□ 0.59
COX4I1-215ENST00000568339 COBLL1Q53SF7 1204 aa18.74■□□□□ 0.59
COX4I1-215ENST00000568339 APTXQ7Z2E3 356 aaKnown RBP18.74■□□□□ 0.59
COX4I1-215ENST00000568339 GLIS2Q9BZE0 524 aaPredicted RBP18.74■□□□□ 0.59
COX4I1-215ENST00000568339 KIAA1683Q9H0B3 1180 aa18.74■□□□□ 0.59
COX4I1-215ENST00000568339 FRMD4AQ9P2Q2 1039 aaPredicted RBP18.74■□□□□ 0.59
COX4I1-215ENST00000568339 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP18.74■□□□□ 0.592e-21■□□□□ 9.2
COX4I1-215ENST00000568339 GJA3Q9Y6H8 435 aa18.74■□□□□ 0.59
COX4I1-215ENST00000568339 ZNF541Q9H0D2 1346 aa18.74■□□□□ 0.59
COX4I1-215ENST00000568339 SMCHD1A6NHR9 2005 aa18.73■□□□□ 0.59
COX4I1-215ENST00000568339 PSDA5PKW4 1024 aaPredicted RBP18.73■□□□□ 0.59
COX4I1-215ENST00000568339 KLHL10Q6JEL2 608 aa18.73■□□□□ 0.59
COX4I1-215ENST00000568339 SYT10Q6XYQ8 523 aa18.73■□□□□ 0.59
COX4I1-215ENST00000568339 CCDC47Q96A33 483 aaKnown RBP18.73■□□□□ 0.59
COX4I1-215ENST00000568339 A0A1B0GTH6 734 aa18.72■□□□□ 0.59
COX4I1-215ENST00000568339 WDR46O15213 610 aaKnown RBP18.72■□□□□ 0.59
COX4I1-215ENST00000568339 PPP1R2P41236 205 aa18.72■□□□□ 0.59
COX4I1-215ENST00000568339 KCNJ6P48051 423 aa18.72■□□□□ 0.59
COX4I1-215ENST00000568339 TBC1D10BQ4KMP7 808 aaPredicted RBP18.72■□□□□ 0.59
COX4I1-215ENST00000568339 SV2BQ7L1I2 683 aa18.72■□□□□ 0.59
COX4I1-215ENST00000568339 ETNPPLQ8TBG4 499 aa18.72■□□□□ 0.59
COX4I1-215ENST00000568339 SNX29Q8TEQ0 813 aa18.72■□□□□ 0.59
COX4I1-215ENST00000568339 UBXN6Q9BZV1 441 aa18.72■□□□□ 0.59
COX4I1-215ENST00000568339 LRRC27Q9C0I9 530 aa18.72■□□□□ 0.59
COX4I1-215ENST00000568339 CTNND2Q9UQB3 1225 aa18.72■□□□□ 0.59
COX4I1-215ENST00000568339 ABCB11O95342 1321 aa18.72■□□□□ 0.59
COX4I1-215ENST00000568339 KDM3AQ9Y4C1 1321 aa18.72■□□□□ 0.59
COX4I1-215ENST00000568339 PRCPP42785 496 aa18.72■□□□□ 0.59
COX4I1-215ENST00000568339 NR1I3Q14994 352 aa18.72■□□□□ 0.59
COX4I1-215ENST00000568339 ARMCX5Q6P1M9 558 aa18.72■□□□□ 0.59
COX4I1-215ENST00000568339 LARP4BQ92615 738 aaKnown RBP18.72■□□□□ 0.59
COX4I1-215ENST00000568339 RAD54LQ92698 747 aa18.72■□□□□ 0.59
COX4I1-215ENST00000568339 LENG9Q96B70 501 aa18.72■□□□□ 0.59
COX4I1-215ENST00000568339 CDK5RAP3Q96JB5 506 aa18.72■□□□□ 0.59
COX4I1-215ENST00000568339 CTAGE1Q96RT6 745 aa18.72■□□□□ 0.59
COX4I1-215ENST00000568339 ZNF341Q9BYN7 854 aa18.72■□□□□ 0.59
COX4I1-215ENST00000568339 FEZ2Q9UHY8 353 aaPredicted RBP18.72■□□□□ 0.59
COX4I1-215ENST00000568339 GDAQ9Y2T3 454 aa18.72■□□□□ 0.59
COX4I1-215ENST00000568339 MRPL11Q9Y3B7 192 aaKnown RBP18.72■□□□□ 0.59
COX4I1-215ENST00000568339 ARHGAP29Q52LW3 1261 aa18.71■□□□□ 0.59
COX4I1-215ENST00000568339 NELFBQ8WX92 580 aa18.71■□□□□ 0.59
COX4I1-215ENST00000568339 HOOK2Q96ED9 719 aa18.71■□□□□ 0.59
COX4I1-215ENST00000568339 NUDT12Q9BQG2 462 aa18.71■□□□□ 0.59
COX4I1-215ENST00000568339 NT5C3AQ9H0P0 336 aa18.71■□□□□ 0.59
COX4I1-215ENST00000568339 ZNF112Q9UJU3 913 aa18.71■□□□□ 0.59
COX4I1-215ENST00000568339 SBF1O95248 1867 aa18.71■□□□□ 0.59
COX4I1-215ENST00000568339 ASTN2O75129 1339 aaPredicted RBP18.71■□□□□ 0.59
COX4I1-215ENST00000568339 PVALEFA0A1B0GWK0 134 aa18.71■□□□□ 0.59
COX4I1-215ENST00000568339 LRRC10BA6NIK2 292 aa18.71■□□□□ 0.59
COX4I1-215ENST00000568339 H7C1D1 291 aa18.71■□□□□ 0.59
COX4I1-215ENST00000568339 STX17P56962 302 aa18.71■□□□□ 0.59
COX4I1-215ENST00000568339 DCAF15Q66K64 600 aa18.71■□□□□ 0.59
COX4I1-215ENST00000568339 APOBEC3FQ8IUX4 373 aaKnown RBP18.71■□□□□ 0.59
COX4I1-215ENST00000568339 KIFC2Q96AC6 838 aa18.71■□□□□ 0.59
COX4I1-215ENST00000568339 FAM20AQ96MK3 541 aa18.71■□□□□ 0.59
COX4I1-215ENST00000568339 STK24Q9Y6E0 443 aa18.71■□□□□ 0.59
COX4I1-215ENST00000568339 MARCH6O60337 910 aa18.7■□□□□ 0.58
COX4I1-215ENST00000568339 SPAG1Q07617 926 aa18.7■□□□□ 0.58
COX4I1-215ENST00000568339 TBX2Q13207 712 aaPredicted RBP18.7■□□□□ 0.58
COX4I1-215ENST00000568339 STIM1Q13586 685 aa18.7■□□□□ 0.58
COX4I1-215ENST00000568339 DHTKD1Q96HY7 919 aaPredicted RBP18.7■□□□□ 0.58
COX4I1-215ENST00000568339 TSPYL1Q9H0U9 437 aa18.7■□□□□ 0.58
COX4I1-215ENST00000568339 GCOM1H8Y6P7 765 aaPredicted RBP18.7■□□□□ 0.58
COX4I1-215ENST00000568339 TUBB4AP04350 444 aa18.7■□□□□ 0.58
COX4I1-215ENST00000568339 POLR2MP0CAP2 368 aa18.7■□□□□ 0.58
COX4I1-215ENST00000568339 ZYXQ15942 572 aaKnown RBP18.7■□□□□ 0.58
COX4I1-215ENST00000568339 LIMA1Q9UHB6 759 aaKnown RBP18.7■□□□□ 0.58
COX4I1-215ENST00000568339 SCAF8Q9UPN6 1271 aaKnown RBP18.7■□□□□ 0.58
COX4I1-215ENST00000568339 SFPQP23246 707 aaKnown RBP eCLIP18.69■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms