RNA–Protein interactions for RNA: ENST00000568238.1

TSC2-220, Transcript of TSC complex subunit 2, humanhuman

TSL 3

Gene TSC2, Length 422 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC2-220ENST00000568238 HSFX3A0A1B0GWH4 333 aaPredicted RBP14.91□□□□□ -0.02
TSC2-220ENST00000568238 CYTH3O43739 400 aa14.91□□□□□ -0.02
TSC2-220ENST00000568238 EIF3JO75822 258 aaKnown RBP14.91□□□□□ -0.02
TSC2-220ENST00000568238 DDAH1O94760 285 aa14.91□□□□□ -0.02
TSC2-220ENST00000568238 NR3C2P08235 984 aa14.91□□□□□ -0.02
TSC2-220ENST00000568238 MMP3P08254 477 aa14.91□□□□□ -0.02
TSC2-220ENST00000568238 DNAJB2P25686 324 aa14.91□□□□□ -0.02
TSC2-220ENST00000568238 HOXA13P31271 388 aaPredicted RBP14.91□□□□□ -0.02
TSC2-220ENST00000568238 HSPA4P34932 840 aa14.91□□□□□ -0.02
TSC2-220ENST00000568238 CCL23P55773 120 aa14.91□□□□□ -0.02
TSC2-220ENST00000568238 NBPF20Q3BBV1 942 aa14.91□□□□□ -0.02
TSC2-220ENST00000568238 RASIP1Q5U651 963 aa14.91□□□□□ -0.02
TSC2-220ENST00000568238 ZNF365Q70YC5 407 aa14.91□□□□□ -0.02
TSC2-220ENST00000568238 RASEFQ8IZ41 740 aa14.91□□□□□ -0.02
TSC2-220ENST00000568238 SAMD3Q8N6K7 520 aa14.91□□□□□ -0.02
TSC2-220ENST00000568238 IGDCC4Q8TDY8 1250 aa14.91□□□□□ -0.02
TSC2-220ENST00000568238 AFG1LQ8WV93 481 aa14.91□□□□□ -0.02
TSC2-220ENST00000568238 CDX2Q99626 313 aaPredicted RBP14.91□□□□□ -0.02
TSC2-220ENST00000568238 USP26Q9BXU7 913 aa14.91□□□□□ -0.02
TSC2-220ENST00000568238 WNT8AQ9H1J5 351 aa14.91□□□□□ -0.02
TSC2-220ENST00000568238 MTIF3Q9H2K0 278 aaKnown RBP14.91□□□□□ -0.02
TSC2-220ENST00000568238 LY9Q9HBG7 655 aa14.91□□□□□ -0.02
TSC2-220ENST00000568238 MRVI1Q9Y6F6 885 aa14.91□□□□□ -0.02
TSC2-220ENST00000568238 PNMA6FA0A0J9YX94 578 aa14.9□□□□□ -0.02
TSC2-220ENST00000568238 PRC1O43663 620 aa14.9□□□□□ -0.02
TSC2-220ENST00000568238 CYP2C9P11712 490 aa14.9□□□□□ -0.02
TSC2-220ENST00000568238 KIF5BP33176 963 aa14.9□□□□□ -0.02
TSC2-220ENST00000568238 ZNF654Q8IZM8 581 aa14.9□□□□□ -0.02
TSC2-220ENST00000568238 CTCFLQ8NI51 663 aaPredicted RBP14.9□□□□□ -0.02
TSC2-220ENST00000568238 MAP3K14Q99558 947 aa14.9□□□□□ -0.02
TSC2-220ENST00000568238 PDCD2LQ9BRP1 358 aa14.9□□□□□ -0.02
TSC2-220ENST00000568238 MTA3Q9BTC8 594 aa14.9□□□□□ -0.02
TSC2-220ENST00000568238 TRIP12Q14669 1992 aaPredicted RBP14.9□□□□□ -0.02
TSC2-220ENST00000568238 MYO9BQ13459 2157 aa14.9□□□□□ -0.02
TSC2-220ENST00000568238 GCOM1H8Y6P7 765 aaPredicted RBP14.89□□□□□ -0.03
TSC2-220ENST00000568238 EIF5BO60841 1220 aaKnown RBP14.89□□□□□ -0.03
TSC2-220ENST00000568238 POLR2MP0CAP2 368 aa14.89□□□□□ -0.03
TSC2-220ENST00000568238 MYCLP12524 364 aaPredicted RBP14.89□□□□□ -0.03
TSC2-220ENST00000568238 MCM5P33992 734 aa14.89□□□□□ -0.03
TSC2-220ENST00000568238 CHMP4BP1P59074 171 aa14.89□□□□□ -0.03
TSC2-220ENST00000568238 PTPN11Q06124 597 aaPredicted RBP14.89□□□□□ -0.03
TSC2-220ENST00000568238 PGM5Q15124 567 aa14.89□□□□□ -0.03
TSC2-220ENST00000568238 PPP1R13LQ8WUF5 828 aa14.89□□□□□ -0.03
TSC2-220ENST00000568238 HERVK_113Q902F9 699 aa14.89□□□□□ -0.03
TSC2-220ENST00000568238 EMID1Q96A84 441 aaPredicted RBP14.89□□□□□ -0.03
TSC2-220ENST00000568238 TIFAQ96CG3 184 aa14.89□□□□□ -0.03
TSC2-220ENST00000568238 MYL10Q9BUA6 226 aa14.89□□□□□ -0.03
TSC2-220ENST00000568238 SPZ1Q9BXG8 430 aa14.89□□□□□ -0.03
TSC2-220ENST00000568238 DDX41Q9UJV9 622 aaKnown RBP14.89□□□□□ -0.03
TSC2-220ENST00000568238 SNX14Q9Y5W7 946 aa14.89□□□□□ -0.03
TSC2-220ENST00000568238 SH2B2O14492 632 aaPredicted RBP14.88□□□□□ -0.03
TSC2-220ENST00000568238 EPB41L2O43491 1005 aaKnown RBP14.88□□□□□ -0.03
TSC2-220ENST00000568238 FGBP02675 491 aa14.88□□□□□ -0.03
TSC2-220ENST00000568238 CASTP20810 708 aaKnown RBP14.88□□□□□ -0.03
TSC2-220ENST00000568238 CCND2P30279 289 aa14.88□□□□□ -0.03
TSC2-220ENST00000568238 COL9A3Q14050 684 aaPredicted RBP14.88□□□□□ -0.03
TSC2-220ENST00000568238 KRT32Q14532 448 aa14.88□□□□□ -0.03
TSC2-220ENST00000568238 DGKDQ16760 1214 aa14.88□□□□□ -0.03
TSC2-220ENST00000568238 ADCK5Q3MIX3 580 aa14.88□□□□□ -0.03
TSC2-220ENST00000568238 NFXL1Q6ZNB6 911 aa14.88□□□□□ -0.03
TSC2-220ENST00000568238 OTOP2Q7RTS6 562 aa14.88□□□□□ -0.03
TSC2-220ENST00000568238 RPUSD2Q8IZ73 545 aaKnown RBP14.88□□□□□ -0.03
TSC2-220ENST00000568238 IL31RAQ8NI17 732 aa14.88□□□□□ -0.03
TSC2-220ENST00000568238 PPTC7Q8NI37 304 aa14.88□□□□□ -0.03
TSC2-220ENST00000568238 PIBF1Q8WXW3 757 aa14.88□□□□□ -0.03
TSC2-220ENST00000568238 MYLIPQ8WY64 445 aa14.88□□□□□ -0.03
TSC2-220ENST00000568238 KCNB2Q92953 911 aa14.88□□□□□ -0.03
TSC2-220ENST00000568238 SCLYQ96I15 445 aa14.88□□□□□ -0.03
TSC2-220ENST00000568238 TMEM87BQ96K49 555 aa14.88□□□□□ -0.03
TSC2-220ENST00000568238 PBX4Q9BYU1 374 aa14.88□□□□□ -0.03
TSC2-220ENST00000568238 CXXC1Q9P0U4 656 aaPredicted RBP14.88□□□□□ -0.03
TSC2-220ENST00000568238 NOD1Q9Y239 953 aa14.88□□□□□ -0.03
TSC2-220ENST00000568238 DOCK5Q9H7D0 1870 aa14.88□□□□□ -0.03
TSC2-220ENST00000568238 SPTBN5Q9NRC6 3674 aaKnown RBP14.88□□□□□ -0.03
TSC2-220ENST00000568238 CCDC69A6NI79 296 aa14.87□□□□□ -0.03
TSC2-220ENST00000568238 PITPNM1O00562 1244 aa14.87□□□□□ -0.03
TSC2-220ENST00000568238 PFKMP08237 780 aa14.87□□□□□ -0.03
TSC2-220ENST00000568238 FOSL2P15408 326 aa14.87□□□□□ -0.03
TSC2-220ENST00000568238 LAMC2Q13753 1193 aa14.87□□□□□ -0.03
TSC2-220ENST00000568238 KCNV1Q6PIU1 500 aa14.87□□□□□ -0.03
TSC2-220ENST00000568238 VSIG10LQ86VR7 867 aa14.87□□□□□ -0.03
TSC2-220ENST00000568238 FCHSD1Q86WN1 690 aa14.87□□□□□ -0.03
TSC2-220ENST00000568238 RRP36Q96EU6 259 aaKnown RBP14.87□□□□□ -0.03
TSC2-220ENST00000568238 JAKMIP1Q96N16 626 aaKnown RBP14.87□□□□□ -0.03
TSC2-220ENST00000568238 LZTS2Q9BRK4 669 aa14.87□□□□□ -0.03
TSC2-220ENST00000568238 KATNAL1Q9BW62 490 aa14.87□□□□□ -0.03
TSC2-220ENST00000568238 SEC63Q9UGP8 760 aaKnown RBP14.87□□□□□ -0.03
TSC2-220ENST00000568238 REV3LO60673 3130 aa14.87□□□□□ -0.03
TSC2-220ENST00000568238 FRMPD4Q14CM0 1322 aa14.87□□□□□ -0.03
TSC2-220ENST00000568238 GRXCR1A8MXD5 290 aa14.86□□□□□ -0.03
TSC2-220ENST00000568238 RGS20O76081 388 aa14.86□□□□□ -0.03
TSC2-220ENST00000568238 ZNF286BP0CG31 522 aa14.86□□□□□ -0.03
TSC2-220ENST00000568238 RFC2P35250 354 aa14.86□□□□□ -0.03
TSC2-220ENST00000568238 PBX2P40425 430 aa14.86□□□□□ -0.03
TSC2-220ENST00000568238 LIFRP42702 1097 aa14.86□□□□□ -0.03
TSC2-220ENST00000568238 GNAQP50148 359 aa14.86□□□□□ -0.03
TSC2-220ENST00000568238 BFSP2Q13515 415 aa14.86□□□□□ -0.03
TSC2-220ENST00000568238 TSGA10IPQ3SY00 556 aa14.86□□□□□ -0.03
TSC2-220ENST00000568238 SESTD1Q86VW0 696 aa14.86□□□□□ -0.03
TSC2-220ENST00000568238 DHX37Q8IY37 1157 aaKnown RBP14.86□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms