RNA–Protein interactions for RNA: ENST00000568034.1

COMMD4-222, Transcript of COMM domain containing 4, humanhuman

TSL 5

Gene COMMD4, Length 1,085 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-222ENST00000568034 UNC93B1Q9H1C4 597 aa20.56■□□□□ 0.88
COMMD4-222ENST00000568034 PDGFCQ9NRA1 345 aa20.56■□□□□ 0.88
COMMD4-222ENST00000568034 ZHX1Q9UKY1 873 aaPredicted RBP20.56■□□□□ 0.88
COMMD4-222ENST00000568034 CNPY2Q9Y2B0 182 aa20.56■□□□□ 0.88
COMMD4-222ENST00000568034 KIAA1217Q5T5P2 1943 aa20.55■□□□□ 0.88
COMMD4-222ENST00000568034 RBM47A0AV96 593 aaKnown RBP20.55■□□□□ 0.88
COMMD4-222ENST00000568034 B4DLN1 442 aa20.55■□□□□ 0.88
COMMD4-222ENST00000568034 KIF28PB7ZC32 967 aa20.55■□□□□ 0.88
COMMD4-222ENST00000568034 ADCY6O43306 1168 aa20.55■□□□□ 0.88
COMMD4-222ENST00000568034 EIF3JO75822 258 aaKnown RBP20.55■□□□□ 0.88
COMMD4-222ENST00000568034 ARHGAP4P98171 946 aa20.55■□□□□ 0.88
COMMD4-222ENST00000568034 XRRA1Q6P2D8 792 aa20.55■□□□□ 0.88
COMMD4-222ENST00000568034 KRT25Q7Z3Z0 450 aa20.55■□□□□ 0.88
COMMD4-222ENST00000568034 INPP4AQ96PE3 977 aaPredicted RBP20.55■□□□□ 0.88
COMMD4-222ENST00000568034 EHMT1Q9H9B1 1298 aa20.55■□□□□ 0.88
COMMD4-222ENST00000568034 CYP3A4P08684 503 aa20.54■□□□□ 0.88
COMMD4-222ENST00000568034 BECN1Q14457 450 aa20.54■□□□□ 0.88
COMMD4-222ENST00000568034 TMEM63BQ5T3F8 832 aa20.54■□□□□ 0.88
COMMD4-222ENST00000568034 LARP1BQ659C4 914 aaKnown RBP20.54■□□□□ 0.88
COMMD4-222ENST00000568034 TBCKQ8TEA7 893 aa20.54■□□□□ 0.88
COMMD4-222ENST00000568034 XRN2Q9H0D6 950 aaKnown RBP eCLIP20.54■□□□□ 0.88
COMMD4-222ENST00000568034 BRMS1Q9HCU9 246 aa20.54■□□□□ 0.88
COMMD4-222ENST00000568034 PAK6Q9NQU5 681 aaPredicted RBP20.54■□□□□ 0.88
COMMD4-222ENST00000568034 UBIAD1Q9Y5Z9 338 aa20.54■□□□□ 0.88
COMMD4-222ENST00000568034 BRCA2P51587 3418 aa20.53■□□□□ 0.88
COMMD4-222ENST00000568034 C11orf97A0A1B0GVM6 126 aaPredicted RBP20.53■□□□□ 0.88
COMMD4-222ENST00000568034 SEPT4O43236 478 aa20.53■□□□□ 0.88
COMMD4-222ENST00000568034 CCL5P13501 91 aa20.53■□□□□ 0.88
COMMD4-222ENST00000568034 ITGB5P18084 799 aa20.53■□□□□ 0.88
COMMD4-222ENST00000568034 ADCYAP1R1P41586 468 aa20.53■□□□□ 0.88
COMMD4-222ENST00000568034 SEMA3FQ13275 785 aa20.53■□□□□ 0.88
COMMD4-222ENST00000568034 NONOQ15233 471 aaKnown RBP eCLIP20.53■□□□□ 0.88
COMMD4-222ENST00000568034 PIK3AP1Q6ZUJ8 805 aa20.53■□□□□ 0.88
COMMD4-222ENST00000568034 SPRYD3Q8NCJ5 442 aa20.53■□□□□ 0.88
COMMD4-222ENST00000568034 FOXP1Q9H334 677 aaPredicted RBP20.53■□□□□ 0.88
COMMD4-222ENST00000568034 HMX1Q9NP08 348 aaPredicted RBP20.53■□□□□ 0.88
COMMD4-222ENST00000568034 RTEL1Q9NZ71 1219 aa20.53■□□□□ 0.88
COMMD4-222ENST00000568034 FAM86B1E9PN63 330 aa20.52■□□□□ 0.88
COMMD4-222ENST00000568034 STAM2O75886 525 aa20.52■□□□□ 0.88
COMMD4-222ENST00000568034 ARIH2O95376 493 aa20.52■□□□□ 0.88
COMMD4-222ENST00000568034 MYCP01106 439 aaPredicted RBP20.52■□□□□ 0.88
COMMD4-222ENST00000568034 FAM86B2P0C5J1 330 aa20.52■□□□□ 0.88
COMMD4-222ENST00000568034 SYT1P21579 422 aa20.52■□□□□ 0.88
COMMD4-222ENST00000568034 PTGS1P23219 599 aa20.52■□□□□ 0.88
COMMD4-222ENST00000568034 U2AF2P26368 475 aaKnown RBP eCLIP20.52■□□□□ 0.88
COMMD4-222ENST00000568034 CIITAP33076 1130 aa20.52■□□□□ 0.88
COMMD4-222ENST00000568034 SAFBQ15424 915 aaKnown RBP eCLIP20.52■□□□□ 0.88
COMMD4-222ENST00000568034 INF2Q27J81 1249 aa20.52■□□□□ 0.88
COMMD4-222ENST00000568034 CCDC144BQ3MJ40 725 aa20.52■□□□□ 0.88
COMMD4-222ENST00000568034 CYP2W1Q8TAV3 490 aa20.52■□□□□ 0.88
COMMD4-222ENST00000568034 LENG1Q96BZ8 264 aaPredicted RBP20.52■□□□□ 0.88
COMMD4-222ENST00000568034 FRMPD3Q5JV73 1810 aa20.52■□□□□ 0.88
COMMD4-222ENST00000568034 IGLV3-22A0A075B6J6 115 aa20.51■□□□□ 0.87
COMMD4-222ENST00000568034 CCDC194A0A1B0GVG4 234 aa20.51■□□□□ 0.87
COMMD4-222ENST00000568034 H3BQV1 296 aa20.51■□□□□ 0.87
COMMD4-222ENST00000568034 HSP90AA1P07900 732 aaKnown RBP20.51■□□□□ 0.87
COMMD4-222ENST00000568034 AKR1A1P14550 325 aa20.51■□□□□ 0.87
COMMD4-222ENST00000568034 PDCP20941 246 aa20.51■□□□□ 0.87
COMMD4-222ENST00000568034 LHX8Q68G74 356 aa20.51■□□□□ 0.87
COMMD4-222ENST00000568034 CCDC62Q6P9F0 684 aa20.51■□□□□ 0.87
COMMD4-222ENST00000568034 SEPT14Q6ZU15 432 aa20.51■□□□□ 0.87
COMMD4-222ENST00000568034 JADE2Q9NQC1 790 aa20.51■□□□□ 0.87
COMMD4-222ENST00000568034 DDX20Q9UHI6 824 aaKnown RBP20.51■□□□□ 0.87
COMMD4-222ENST00000568034 WNT7AO00755 349 aa20.5■□□□□ 0.87
COMMD4-222ENST00000568034 SMPD1P17405 629 aa20.5■□□□□ 0.87
COMMD4-222ENST00000568034 ICAM3P32942 547 aa20.5■□□□□ 0.87
COMMD4-222ENST00000568034 CEP55Q53EZ4 464 aa20.5■□□□□ 0.87
COMMD4-222ENST00000568034 SCFD2Q8WU76 684 aa20.5■□□□□ 0.87
COMMD4-222ENST00000568034 LENG9Q96B70 501 aa20.5■□□□□ 0.87
COMMD4-222ENST00000568034 ABHD8Q96I13 439 aa20.5■□□□□ 0.87
COMMD4-222ENST00000568034 MXRA8Q9BRK3 442 aa20.5■□□□□ 0.87
COMMD4-222ENST00000568034 WDR11Q9BZH6 1224 aa20.5■□□□□ 0.87
COMMD4-222ENST00000568034 FAM184BQ9ULE4 1060 aa20.5■□□□□ 0.87
COMMD4-222ENST00000568034 MTMR6Q9Y217 621 aa20.5■□□□□ 0.87
COMMD4-222ENST00000568034 GNEQ9Y223 722 aaKnown RBP20.5■□□□□ 0.87
COMMD4-222ENST00000568034 POTEFA5A3E0 1075 aa20.49■□□□□ 0.87
COMMD4-222ENST00000568034 MEIS1O00470 390 aa20.49■□□□□ 0.87
COMMD4-222ENST00000568034 CNGA1P29973 690 aa20.49■□□□□ 0.87
COMMD4-222ENST00000568034 USP11P51784 963 aa20.49■□□□□ 0.87
COMMD4-222ENST00000568034 GJC2Q5T442 439 aaPredicted RBP20.49■□□□□ 0.87
COMMD4-222ENST00000568034 ANO1Q5XXA6 986 aa20.49■□□□□ 0.87
COMMD4-222ENST00000568034 IQSEC1Q6DN90 963 aa20.49■□□□□ 0.87
COMMD4-222ENST00000568034 NOSTRINQ8IVI9 506 aa20.49■□□□□ 0.87
COMMD4-222ENST00000568034 GPRASP2Q96D09 838 aa20.49■□□□□ 0.87
COMMD4-222ENST00000568034 MBOAT7Q96N66 472 aa20.49■□□□□ 0.87
COMMD4-222ENST00000568034 RNF208Q9H0X6 261 aa20.49■□□□□ 0.87
COMMD4-222ENST00000568034 DDX41Q9UJV9 622 aaKnown RBP20.49■□□□□ 0.87
COMMD4-222ENST00000568034 RBM19Q9Y4C8 960 aaKnown RBP20.49■□□□□ 0.87
COMMD4-222ENST00000568034 KIAA0100Q14667 2235 aaKnown RBP20.49■□□□□ 0.87
COMMD4-222ENST00000568034 CYP3A7-CYP3A51PA0A087WV96 503 aa20.48■□□□□ 0.87
COMMD4-222ENST00000568034 SPATA31C2B4DYI2 1134 aa20.48■□□□□ 0.87
COMMD4-222ENST00000568034 FIBPO43427 364 aa20.48■□□□□ 0.87
COMMD4-222ENST00000568034 TDP2O95551 362 aa20.48■□□□□ 0.87
COMMD4-222ENST00000568034 CYP3A7P24462 503 aa20.48■□□□□ 0.87
COMMD4-222ENST00000568034 SP2Q02086 613 aa20.48■□□□□ 0.87
COMMD4-222ENST00000568034 TNFAIP2Q03169 654 aa20.48■□□□□ 0.87
COMMD4-222ENST00000568034 DUSP28Q4G0W2 176 aa20.48■□□□□ 0.87
COMMD4-222ENST00000568034 MOXD1Q6UVY6 613 aa20.48■□□□□ 0.87
COMMD4-222ENST00000568034 NIPA1Q7RTP0 329 aa20.48■□□□□ 0.87
COMMD4-222ENST00000568034 NEK8Q86SG6 692 aa20.48■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms