RNA–Protein interactions for RNA: ENST00000567843.1

GTF3C1-208, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 3

Gene GTF3C1, Length 474 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-208ENST00000567843 CREB3L3Q68CJ9 461 aa14.17□□□□□ -0.14
GTF3C1-208ENST00000567843 PSRC1Q6PGN9 363 aaPredicted RBP14.17□□□□□ -0.14
GTF3C1-208ENST00000567843 CASC1Q6TDU7 716 aa14.17□□□□□ -0.14
GTF3C1-208ENST00000567843 DEFB128Q7Z7B8 93 aa14.17□□□□□ -0.14
GTF3C1-208ENST00000567843 ZNF654Q8IZM8 581 aa14.17□□□□□ -0.14
GTF3C1-208ENST00000567843 PDCD2LQ9BRP1 358 aa14.17□□□□□ -0.14
GTF3C1-208ENST00000567843 A0A0C4DFX4 3053 aa14.16□□□□□ -0.14
GTF3C1-208ENST00000567843 hCG_1642624A0A1W2PR95 340 aa14.16□□□□□ -0.14
GTF3C1-208ENST00000567843 GCOM1H8Y6P7 765 aaPredicted RBP14.16□□□□□ -0.14
GTF3C1-208ENST00000567843 EIF3JO75822 258 aaKnown RBP14.16□□□□□ -0.14
GTF3C1-208ENST00000567843 RGS20O76081 388 aa14.16□□□□□ -0.14
GTF3C1-208ENST00000567843 PLEKHA8P1O95397 391 aa14.16□□□□□ -0.14
GTF3C1-208ENST00000567843 POLR2MP0CAP2 368 aa14.16□□□□□ -0.14
GTF3C1-208ENST00000567843 GRIN2CQ14957 1233 aa14.16□□□□□ -0.14
GTF3C1-208ENST00000567843 CTCFLQ8NI51 663 aaPredicted RBP14.16□□□□□ -0.14
GTF3C1-208ENST00000567843 GPKOWQ92917 476 aaPredicted RBP eCLIP14.16□□□□□ -0.14
GTF3C1-208ENST00000567843 TIFAQ96CG3 184 aa14.16□□□□□ -0.14
GTF3C1-208ENST00000567843 ALG1Q9BT22 464 aa14.16□□□□□ -0.14
GTF3C1-208ENST00000567843 NOD1Q9Y239 953 aa14.16□□□□□ -0.14
GTF3C1-208ENST00000567843 MYH6P13533 1939 aa14.15□□□□□ -0.14
GTF3C1-208ENST00000567843 MYO9BQ13459 2157 aa14.15□□□□□ -0.14
GTF3C1-208ENST00000567843 CCDC69A6NI79 296 aa14.15□□□□□ -0.14
GTF3C1-208ENST00000567843 ZBBXA8MT70 800 aa14.15□□□□□ -0.14
GTF3C1-208ENST00000567843 SH2B2O14492 632 aaPredicted RBP14.15□□□□□ -0.14
GTF3C1-208ENST00000567843 KPNA6O60684 536 aa14.15□□□□□ -0.14
GTF3C1-208ENST00000567843 SUPT20HL2P0C7V6 817 aa14.15□□□□□ -0.14
GTF3C1-208ENST00000567843 MCM5P33992 734 aa14.15□□□□□ -0.14
GTF3C1-208ENST00000567843 PGM5Q15124 567 aa14.15□□□□□ -0.14
GTF3C1-208ENST00000567843 RASIP1Q5U651 963 aa14.15□□□□□ -0.14
GTF3C1-208ENST00000567843 CENPQQ7L2Z9 268 aaPredicted RBP14.15□□□□□ -0.14
GTF3C1-208ENST00000567843 DHX37Q8IY37 1157 aaKnown RBP14.15□□□□□ -0.14
GTF3C1-208ENST00000567843 CCDC82Q8N4S0 544 aa14.15□□□□□ -0.14
GTF3C1-208ENST00000567843 KAT2BQ92831 832 aa14.15□□□□□ -0.14
GTF3C1-208ENST00000567843 VWCEQ96DN2 955 aa14.15□□□□□ -0.14
GTF3C1-208ENST00000567843 SEZ6LQ9BYH1 1024 aa14.15□□□□□ -0.14
GTF3C1-208ENST00000567843 PBX4Q9BYU1 374 aa14.15□□□□□ -0.14
GTF3C1-208ENST00000567843 BCAS3Q9H6U6 928 aa14.15□□□□□ -0.14
GTF3C1-208ENST00000567843 DLL1O00548 723 aa14.14□□□□□ -0.15
GTF3C1-208ENST00000567843 ZNF286BP0CG31 522 aa14.14□□□□□ -0.15
GTF3C1-208ENST00000567843 FOSL2P15408 326 aa14.14□□□□□ -0.15
GTF3C1-208ENST00000567843 CASTP20810 708 aaKnown RBP14.14□□□□□ -0.15
GTF3C1-208ENST00000567843 RABGGTBP53611 331 aa14.14□□□□□ -0.15
GTF3C1-208ENST00000567843 SP2Q02086 613 aa14.14□□□□□ -0.15
GTF3C1-208ENST00000567843 GHRHRQ02643 423 aa14.14□□□□□ -0.15
GTF3C1-208ENST00000567843 NECTIN1Q15223 517 aa14.14□□□□□ -0.15
GTF3C1-208ENST00000567843 GDF6Q6KF10 455 aaPredicted RBP14.14□□□□□ -0.15
GTF3C1-208ENST00000567843 NFRKBQ6P4R8 1299 aa14.14□□□□□ -0.15
GTF3C1-208ENST00000567843 USP17L6PQ6QN14 398 aa14.14□□□□□ -0.15
GTF3C1-208ENST00000567843 VSIG10LQ86VR7 867 aa14.14□□□□□ -0.15
GTF3C1-208ENST00000567843 SRBD1Q8N5C6 995 aaKnown RBP14.14□□□□□ -0.15
GTF3C1-208ENST00000567843 HERVK_113Q902F9 699 aa14.14□□□□□ -0.15
GTF3C1-208ENST00000567843 RRP36Q96EU6 259 aaKnown RBP14.14□□□□□ -0.15
GTF3C1-208ENST00000567843 TCEANC2Q96MN5 208 aa14.14□□□□□ -0.15
GTF3C1-208ENST00000567843 MAF1Q9H063 256 aa14.14□□□□□ -0.15
GTF3C1-208ENST00000567843 ZNF576Q9H609 170 aa14.14□□□□□ -0.15
GTF3C1-208ENST00000567843 RTEL1Q9NZ71 1219 aa14.14□□□□□ -0.15
GTF3C1-208ENST00000567843 CDH23Q9H251 3354 aa14.14□□□□□ -0.15
GTF3C1-208ENST00000567843 DDAH1O94760 285 aa14.13□□□□□ -0.15
GTF3C1-208ENST00000567843 GGPS1O95749 300 aa14.13□□□□□ -0.15
GTF3C1-208ENST00000567843 CCND2P30279 289 aa14.13□□□□□ -0.15
GTF3C1-208ENST00000567843 KIF5BP33176 963 aa14.13□□□□□ -0.15
GTF3C1-208ENST00000567843 PSEN2P49810 448 aa14.13□□□□□ -0.15
GTF3C1-208ENST00000567843 LAMC2Q13753 1193 aa14.13□□□□□ -0.15
GTF3C1-208ENST00000567843 PTGISQ16647 500 aa14.13□□□□□ -0.15
GTF3C1-208ENST00000567843 DGKDQ16760 1214 aa14.13□□□□□ -0.15
GTF3C1-208ENST00000567843 RPUSD2Q8IZ73 545 aaKnown RBP14.13□□□□□ -0.15
GTF3C1-208ENST00000567843 RETREG2Q8NC44 543 aa14.13□□□□□ -0.15
GTF3C1-208ENST00000567843 MAFAQ8NHW3 353 aaPredicted RBP14.13□□□□□ -0.15
GTF3C1-208ENST00000567843 NKX2-4Q9H2Z4 354 aa14.13□□□□□ -0.15
GTF3C1-208ENST00000567843 SCN10AQ9Y5Y9 1956 aa14.13□□□□□ -0.15
GTF3C1-208ENST00000567843 MYOGP15173 224 aa14.12□□□□□ -0.15
GTF3C1-208ENST00000567843 UBA1P22314 1058 aaKnown RBP14.12□□□□□ -0.15
GTF3C1-208ENST00000567843 ZNF200P98182 395 aaPredicted RBP14.12□□□□□ -0.15
GTF3C1-208ENST00000567843 TRAF1Q13077 416 aa14.12□□□□□ -0.15
GTF3C1-208ENST00000567843 HSDL1Q3SXM5 330 aa14.12□□□□□ -0.15
GTF3C1-208ENST00000567843 BMP2KLQ5H9B9 411 aa14.12□□□□□ -0.15
GTF3C1-208ENST00000567843 MYSM1Q5VVJ2 828 aa14.12□□□□□ -0.15
GTF3C1-208ENST00000567843 SMARCC2Q8TAQ2 1214 aa14.12□□□□□ -0.15
GTF3C1-208ENST00000567843 TMEM87BQ96K49 555 aa14.12□□□□□ -0.15
GTF3C1-208ENST00000567843 SPATA33Q96N06 139 aa14.12□□□□□ -0.15
GTF3C1-208ENST00000567843 FTOQ9C0B1 505 aaKnown RBP eCLIP14.12□□□□□ -0.15
GTF3C1-208ENST00000567843 PRDM12Q9H4Q4 367 aa14.12□□□□□ -0.15
GTF3C1-208ENST00000567843 MAP3K20Q9NYL2 800 aaKnown RBP14.12□□□□□ -0.15
GTF3C1-208ENST00000567843 HDAC6Q9UBN7 1215 aa14.12□□□□□ -0.15
GTF3C1-208ENST00000567843 SEC63Q9UGP8 760 aaKnown RBP14.12□□□□□ -0.15
GTF3C1-208ENST00000567843 MSRAQ9UJ68 235 aa14.12□□□□□ -0.15
GTF3C1-208ENST00000567843 YBX2Q9Y2T7 364 aaKnown RBP14.12□□□□□ -0.15
GTF3C1-208ENST00000567843 SLC12A7Q9Y666 1083 aa14.12□□□□□ -0.15
GTF3C1-208ENST00000567843 SLC4A7Q9Y6M7 1214 aa14.12□□□□□ -0.15
GTF3C1-208ENST00000567843 IQCF3P0C7M6 154 aa14.11□□□□□ -0.15
GTF3C1-208ENST00000567843 MRPS9P82933 396 aaKnown RBP14.11□□□□□ -0.15
GTF3C1-208ENST00000567843 SP4Q02446 784 aa14.11□□□□□ -0.15
GTF3C1-208ENST00000567843 PTPN11Q06124 597 aaPredicted RBP14.11□□□□□ -0.15
GTF3C1-208ENST00000567843 MFSD10Q14728 455 aa14.11□□□□□ -0.15
GTF3C1-208ENST00000567843 KIAA0753Q2KHM9 967 aa14.11□□□□□ -0.15
GTF3C1-208ENST00000567843 CELF3Q5SZQ8 465 aaKnown RBP14.11□□□□□ -0.15
GTF3C1-208ENST00000567843 MICU3Q86XE3 530 aa14.11□□□□□ -0.15
GTF3C1-208ENST00000567843 PHF6Q8IWS0 365 aaKnown RBP eCLIP14.11□□□□□ -0.15
GTF3C1-208ENST00000567843 RASEFQ8IZ41 740 aa14.11□□□□□ -0.15
GTF3C1-208ENST00000567843 C7orf31Q8N865 590 aa14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms