RNA–Protein interactions for RNA: ENST00000567635.5

SF3B3-209, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 5

Gene SF3B3, Length 630 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-209ENST00000567635 TMEM199Q8N511 208 aa8□□□□□ -1.13
SF3B3-209ENST00000567635 DEFB123Q8N688 67 aa8□□□□□ -1.13
SF3B3-209ENST00000567635 FANCBQ8NB91 859 aa8□□□□□ -1.13
SF3B3-209ENST00000567635 NEK1Q96PY6 1258 aa8□□□□□ -1.13
SF3B3-209ENST00000567635 MYL10Q9BUA6 226 aa8□□□□□ -1.13
SF3B3-209ENST00000567635 LRRC2Q9BYS8 371 aa8□□□□□ -1.13
SF3B3-209ENST00000567635 TRPV6Q9H1D0 765 aa8□□□□□ -1.13
SF3B3-209ENST00000567635 SLC12A7Q9Y666 1083 aa8□□□□□ -1.13
SF3B3-209ENST00000567635 TET1Q8NFU7 2136 aa8□□□□□ -1.13
SF3B3-209ENST00000567635 B4GALT4O60513 344 aa7.99□□□□□ -1.13
SF3B3-209ENST00000567635 ARIH2O95376 493 aa7.99□□□□□ -1.13
SF3B3-209ENST00000567635 SUPT20HL2P0C7V6 817 aa7.99□□□□□ -1.13
SF3B3-209ENST00000567635 TGFB3P10600 412 aa7.99□□□□□ -1.13
SF3B3-209ENST00000567635 CYP2C18P33260 490 aa7.99□□□□□ -1.13
SF3B3-209ENST00000567635 EPHB4P54760 987 aa7.99□□□□□ -1.13
SF3B3-209ENST00000567635 EXOSC10Q01780 885 aaKnown RBP7.99□□□□□ -1.13
SF3B3-209ENST00000567635 PPIGQ13427 754 aaKnown RBP eCLIP7.99□□□□□ -1.135e-8■□□□□ 10.6
SF3B3-209ENST00000567635 KRT32Q14532 448 aa7.99□□□□□ -1.13
SF3B3-209ENST00000567635 PGM5Q15124 567 aa7.99□□□□□ -1.13
SF3B3-209ENST00000567635 NBPF20Q3BBV1 942 aa7.99□□□□□ -1.13
SF3B3-209ENST00000567635 FAM109BQ6ICB4 259 aaPredicted RBP7.99□□□□□ -1.13
SF3B3-209ENST00000567635 KCNV1Q6PIU1 500 aa7.99□□□□□ -1.13
SF3B3-209ENST00000567635 SGMS1Q86VZ5 419 aa7.99□□□□□ -1.13
SF3B3-209ENST00000567635 SRBD1Q8N5C6 995 aaKnown RBP7.99□□□□□ -1.13
SF3B3-209ENST00000567635 AFG1LQ8WV93 481 aa7.99□□□□□ -1.13
SF3B3-209ENST00000567635 PDCD2LQ9BRP1 358 aa7.99□□□□□ -1.13
SF3B3-209ENST00000567635 PPP1R12CQ9BZL4 782 aa7.99□□□□□ -1.13
SF3B3-209ENST00000567635 ALDH8A1Q9H2A2 487 aaPredicted RBP7.99□□□□□ -1.13
SF3B3-209ENST00000567635 SEC63Q9UGP8 760 aaKnown RBP7.99□□□□□ -1.13
SF3B3-209ENST00000567635 DDX41Q9UJV9 622 aaKnown RBP7.99□□□□□ -1.13
SF3B3-209ENST00000567635 RGS20O76081 388 aa7.98□□□□□ -1.13
SF3B3-209ENST00000567635 PLEKHA8P1O95397 391 aa7.98□□□□□ -1.13
SF3B3-209ENST00000567635 HMGB1P09429 215 aaKnown RBP7.98□□□□□ -1.13
SF3B3-209ENST00000567635 CSF2RAP15509 400 aa7.98□□□□□ -1.13
SF3B3-209ENST00000567635 RXRAP19793 462 aa7.98□□□□□ -1.13
SF3B3-209ENST00000567635 CASTP20810 708 aaKnown RBP7.98□□□□□ -1.13
SF3B3-209ENST00000567635 CCND2P30279 289 aa7.98□□□□□ -1.13
SF3B3-209ENST00000567635 SMAD3P84022 425 aaKnown RBP7.98□□□□□ -1.13
SF3B3-209ENST00000567635 PTPN11Q06124 597 aaPredicted RBP7.98□□□□□ -1.13
SF3B3-209ENST00000567635 ARHGAP1Q07960 439 aa7.98□□□□□ -1.13
SF3B3-209ENST00000567635 LAMC2Q13753 1193 aa7.98□□□□□ -1.13
SF3B3-209ENST00000567635 DGKDQ16760 1214 aa7.98□□□□□ -1.13
SF3B3-209ENST00000567635 ADCK5Q3MIX3 580 aa7.98□□□□□ -1.13
SF3B3-209ENST00000567635 TMEM240Q5SV17 173 aa7.98□□□□□ -1.13
SF3B3-209ENST00000567635 NFRKBQ6P4R8 1299 aa7.98□□□□□ -1.13
SF3B3-209ENST00000567635 Q7L0L9 218 aa7.98□□□□□ -1.13
SF3B3-209ENST00000567635 C16orf59Q7L2K0 433 aa7.98□□□□□ -1.13
SF3B3-209ENST00000567635 DHX37Q8IY37 1157 aaKnown RBP7.98□□□□□ -1.13
SF3B3-209ENST00000567635 RASEFQ8IZ41 740 aa7.98□□□□□ -1.13
SF3B3-209ENST00000567635 CMTR1Q8N1G2 835 aaKnown RBP7.98□□□□□ -1.13
SF3B3-209ENST00000567635 CCDC82Q8N4S0 544 aa7.98□□□□□ -1.13
SF3B3-209ENST00000567635 KCNB2Q92953 911 aa7.98□□□□□ -1.13
SF3B3-209ENST00000567635 CUL5Q93034 780 aa7.98□□□□□ -1.13
SF3B3-209ENST00000567635 EMID1Q96A84 441 aaPredicted RBP7.98□□□□□ -1.13
SF3B3-209ENST00000567635 RNPC3Q96LT9 517 aaKnown RBP7.98□□□□□ -1.13
SF3B3-209ENST00000567635 NOC4LQ9BVI4 516 aaKnown RBP7.98□□□□□ -1.13
SF3B3-209ENST00000567635 HIPK3Q9H422 1215 aa7.98□□□□□ -1.13
SF3B3-209ENST00000567635 PSTPIP2Q9H939 334 aa7.98□□□□□ -1.13
SF3B3-209ENST00000567635 MTMR10Q9NXD2 777 aa7.98□□□□□ -1.13
SF3B3-209ENST00000567635 MRVI1Q9Y6F6 885 aa7.98□□□□□ -1.13
SF3B3-209ENST00000567635 GBF1Q92538 1859 aa7.98□□□□□ -1.13
SF3B3-209ENST00000567635 MYH9P35579 1960 aaKnown RBP7.97□□□□□ -1.13
SF3B3-209ENST00000567635 HSFX4A0A1B0GTS1 333 aaPredicted RBP7.97□□□□□ -1.13
SF3B3-209ENST00000567635 HSFX3A0A1B0GWH4 333 aaPredicted RBP7.97□□□□□ -1.13
SF3B3-209ENST00000567635 PIK3CDO00329 1044 aa7.97□□□□□ -1.13
SF3B3-209ENST00000567635 MEIS2O14770 477 aa7.97□□□□□ -1.13
SF3B3-209ENST00000567635 PPFIA4O75335 1185 aa7.97□□□□□ -1.13
SF3B3-209ENST00000567635 STAM2O75886 525 aa7.97□□□□□ -1.13
SF3B3-209ENST00000567635 REC8O95072 547 aa7.97□□□□□ -1.13
SF3B3-209ENST00000567635 FGBP02675 491 aa7.97□□□□□ -1.13
SF3B3-209ENST00000567635 MMP3P08254 477 aa7.97□□□□□ -1.13
SF3B3-209ENST00000567635 ACRP10323 421 aa7.97□□□□□ -1.13
SF3B3-209ENST00000567635 CCL23P55773 120 aa7.97□□□□□ -1.13
SF3B3-209ENST00000567635 CHMP4BP1P59074 171 aa7.97□□□□□ -1.13
SF3B3-209ENST00000567635 SP2Q02086 613 aa7.97□□□□□ -1.13
SF3B3-209ENST00000567635 FAM47CQ5HY64 1035 aa7.97□□□□□ -1.13
SF3B3-209ENST00000567635 CELF3Q5SZQ8 465 aaKnown RBP7.97□□□□□ -1.13
SF3B3-209ENST00000567635 MYSM1Q5VVJ2 828 aa7.97□□□□□ -1.13
SF3B3-209ENST00000567635 ERICH6BQ5W0A0 696 aa7.97□□□□□ -1.13
SF3B3-209ENST00000567635 XRRA1Q6P2D8 792 aa7.97□□□□□ -1.13
SF3B3-209ENST00000567635 APOA5Q6Q788 366 aa7.97□□□□□ -1.13
SF3B3-209ENST00000567635 USP17L6PQ6QN14 398 aa7.97□□□□□ -1.13
SF3B3-209ENST00000567635 TMTC3Q6ZXV5 915 aa7.97□□□□□ -1.13
SF3B3-209ENST00000567635 ZNF365Q70YC5 407 aa7.97□□□□□ -1.13
SF3B3-209ENST00000567635 RAB11FIP4Q86YS3 637 aa7.97□□□□□ -1.13
SF3B3-209ENST00000567635 RPUSD2Q8IZ73 545 aaKnown RBP7.97□□□□□ -1.13
SF3B3-209ENST00000567635 SPDYE1Q8NFV5 336 aaPredicted RBP7.97□□□□□ -1.13
SF3B3-209ENST00000567635 IL31RAQ8NI17 732 aa7.97□□□□□ -1.13
SF3B3-209ENST00000567635 PPTC7Q8NI37 304 aa7.97□□□□□ -1.13
SF3B3-209ENST00000567635 SMARCC2Q8TAQ2 1214 aa7.97□□□□□ -1.13
SF3B3-209ENST00000567635 ZFP91Q96JP5 570 aaPredicted RBP7.97□□□□□ -1.13
SF3B3-209ENST00000567635 BUD13Q9BRD0 619 aaKnown RBP eCLIP7.97□□□□□ -1.136e-16■■□□□ 13.3
SF3B3-209ENST00000567635 IL23AQ9NPF7 189 aa7.97□□□□□ -1.13
SF3B3-209ENST00000567635 TRMT13Q9NUP7 481 aaKnown RBP7.97□□□□□ -1.13
SF3B3-209ENST00000567635 RBM28Q9NW13 759 aaKnown RBP7.97□□□□□ -1.13
SF3B3-209ENST00000567635 BRPF3Q9ULD4 1205 aa7.97□□□□□ -1.13
SF3B3-209ENST00000567635 SZT2Q5T011 3432 aa7.97□□□□□ -1.13
SF3B3-209ENST00000567635 hCG_1642624A0A1W2PR95 340 aa7.96□□□□□ -1.14
SF3B3-209ENST00000567635 SPATA31C2B4DYI2 1134 aa7.96□□□□□ -1.14
SF3B3-209ENST00000567635 ZBTB43O43298 467 aa7.96□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms