RNA–Protein interactions for RNA: ENST00000567406.5

CDR2-206, Transcript of cerebellar degeneration related protein 2, humanhuman

TSL 4

Gene CDR2, Length 567 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDR2-206ENST00000567406 SLC28A3Q9HAS3 691 aa17.79■□□□□ 0.44
CDR2-206ENST00000567406 PXMP2Q9NR77 195 aa17.79■□□□□ 0.44
CDR2-206ENST00000567406 REV3LO60673 3130 aa17.78■□□□□ 0.44
CDR2-206ENST00000567406 NR3C2P08235 984 aa17.78■□□□□ 0.44
CDR2-206ENST00000567406 IQCF3P0C7M6 154 aa17.78■□□□□ 0.44
CDR2-206ENST00000567406 MYCLP12524 364 aaPredicted RBP17.78■□□□□ 0.44
CDR2-206ENST00000567406 ATP2A2P16615 1042 aaKnown RBP17.78■□□□□ 0.44
CDR2-206ENST00000567406 GDF6Q6KF10 455 aaPredicted RBP17.78■□□□□ 0.44
CDR2-206ENST00000567406 PIBF1Q8WXW3 757 aa17.78■□□□□ 0.44
CDR2-206ENST00000567406 CTAGE1Q96RT6 745 aa17.78■□□□□ 0.44
CDR2-206ENST00000567406 IWS1Q96ST2 819 aa17.78■□□□□ 0.44
CDR2-206ENST00000567406 DDX41Q9UJV9 622 aaKnown RBP17.78■□□□□ 0.44
CDR2-206ENST00000567406 NOD1Q9Y239 953 aa17.78■□□□□ 0.44
CDR2-206ENST00000567406 PCDHA1Q9Y5I3 950 aa17.78■□□□□ 0.44
CDR2-206ENST00000567406 TET1Q8NFU7 2136 aa17.78■□□□□ 0.44
CDR2-206ENST00000567406 KIAA1217Q5T5P2 1943 aa17.78■□□□□ 0.44
CDR2-206ENST00000567406 MYH7BA7E2Y1 1941 aa17.77■□□□□ 0.44
CDR2-206ENST00000567406 PALM3A6NDB9 673 aaPredicted RBP17.77■□□□□ 0.44
CDR2-206ENST00000567406 IFIT3O14879 490 aaKnown RBP17.77■□□□□ 0.44
CDR2-206ENST00000567406 HSD17B4P51659 736 aa17.77■□□□□ 0.44
CDR2-206ENST00000567406 PTGISQ16647 500 aa17.77■□□□□ 0.44
CDR2-206ENST00000567406 STOX1Q6ZVD7 989 aa17.77■□□□□ 0.44
CDR2-206ENST00000567406 RETREG2Q8NC44 543 aa17.77■□□□□ 0.44
CDR2-206ENST00000567406 IL31RAQ8NI17 732 aa17.77■□□□□ 0.44
CDR2-206ENST00000567406 MTMR8Q96EF0 704 aa17.77■□□□□ 0.44
CDR2-206ENST00000567406 PIGSQ96S52 555 aa17.77■□□□□ 0.44
CDR2-206ENST00000567406 ALG1Q9BT22 464 aa17.77■□□□□ 0.44
CDR2-206ENST00000567406 FTOQ9C0B1 505 aaKnown RBP eCLIP17.77■□□□□ 0.446e-7■■■□□ 15
CDR2-206ENST00000567406 MRVI1Q9Y6F6 885 aa17.77■□□□□ 0.44
CDR2-206ENST00000567406 RFXAPO00287 272 aa17.76■□□□□ 0.43
CDR2-206ENST00000567406 ZBTB5O15062 677 aa17.76■□□□□ 0.43
CDR2-206ENST00000567406 EIF3JO75822 258 aaKnown RBP17.76■□□□□ 0.43
CDR2-206ENST00000567406 RGS20O76081 388 aa17.76■□□□□ 0.43
CDR2-206ENST00000567406 ZNF286BP0CG31 522 aa17.76■□□□□ 0.43
CDR2-206ENST00000567406 TRDNQ13061 729 aa17.76■□□□□ 0.43
CDR2-206ENST00000567406 PPP2R2DQ66LE6 453 aa17.76■□□□□ 0.43
CDR2-206ENST00000567406 DHX38Q92620 1227 aaKnown RBP17.76■□□□□ 0.43
CDR2-206ENST00000567406 GPKOWQ92917 476 aaPredicted RBP eCLIP17.76■□□□□ 0.43
CDR2-206ENST00000567406 CERS4Q9HA82 394 aa17.76■□□□□ 0.43
CDR2-206ENST00000567406 E7EWF7 191 aa17.75■□□□□ 0.43
CDR2-206ENST00000567406 CYTH3O43739 400 aa17.75■□□□□ 0.43
CDR2-206ENST00000567406 CASTP20810 708 aaKnown RBP17.75■□□□□ 0.43
CDR2-206ENST00000567406 ZNF200P98182 395 aaPredicted RBP17.75■□□□□ 0.43
CDR2-206ENST00000567406 PTPN11Q06124 597 aaPredicted RBP17.75■□□□□ 0.43
CDR2-206ENST00000567406 GRM4Q14833 912 aa17.75■□□□□ 0.43
CDR2-206ENST00000567406 FCHSD1Q86WN1 690 aa17.75■□□□□ 0.43
CDR2-206ENST00000567406 MICALL1Q8N3F8 863 aa17.75■□□□□ 0.43
CDR2-206ENST00000567406 RUFY2Q8WXA3 655 aa17.75■□□□□ 0.43
CDR2-206ENST00000567406 PDCD2LQ9BRP1 358 aa17.75■□□□□ 0.43
CDR2-206ENST00000567406 HDAC6Q9UBN7 1215 aa17.75■□□□□ 0.43
CDR2-206ENST00000567406 PCDHA11Q9Y5I1 949 aa17.75■□□□□ 0.43
CDR2-206ENST00000567406 U3KPZ7 1027 aaPredicted RBP17.75■□□□□ 0.43
CDR2-206ENST00000567406 TTC28Q96AY4 2481 aa17.74■□□□□ 0.43
CDR2-206ENST00000567406 ARHGEF15O94989 841 aa17.74■□□□□ 0.43
CDR2-206ENST00000567406 CA3P07451 260 aa17.74■□□□□ 0.43
CDR2-206ENST00000567406 PFKMP08237 780 aa17.74■□□□□ 0.43
CDR2-206ENST00000567406 PSEN2P49810 448 aa17.74■□□□□ 0.43
CDR2-206ENST00000567406 ANTXR2P58335 489 aa17.74■□□□□ 0.43
CDR2-206ENST00000567406 SP2Q02086 613 aa17.74■□□□□ 0.43
CDR2-206ENST00000567406 BFSP2Q13515 415 aa17.74■□□□□ 0.43
CDR2-206ENST00000567406 GPNMBQ14956 572 aa17.74■□□□□ 0.43
CDR2-206ENST00000567406 WTAPQ15007 396 aa17.74■□□□□ 0.43
CDR2-206ENST00000567406 DGKDQ16760 1214 aa17.74■□□□□ 0.43
CDR2-206ENST00000567406 TMCO2Q7Z6W1 182 aaPredicted RBP17.74■□□□□ 0.43
CDR2-206ENST00000567406 DHX37Q8IY37 1157 aaKnown RBP17.74■□□□□ 0.43
CDR2-206ENST00000567406 MAF1Q9H063 256 aa17.74■□□□□ 0.43
CDR2-206ENST00000567406 BCAS3Q9H6U6 928 aa17.74■□□□□ 0.43
CDR2-206ENST00000567406 MUC3AQ02505 3323 aa17.74■□□□□ 0.43
CDR2-206ENST00000567406 PITPNM1O00562 1244 aa17.73■□□□□ 0.43
CDR2-206ENST00000567406 SGSM2O43147 1006 aa17.73■□□□□ 0.43
CDR2-206ENST00000567406 COL9A3Q14050 684 aaPredicted RBP17.73■□□□□ 0.43
CDR2-206ENST00000567406 MFSD10Q14728 455 aa17.73■□□□□ 0.43
CDR2-206ENST00000567406 PGM5Q15124 567 aa17.73■□□□□ 0.43
CDR2-206ENST00000567406 TCTN1Q2MV58 587 aa17.73■□□□□ 0.43
CDR2-206ENST00000567406 TMEM67Q5HYA8 995 aa17.73■□□□□ 0.43
CDR2-206ENST00000567406 RALYLQ86SE5 291 aaKnown RBP17.73■□□□□ 0.43
CDR2-206ENST00000567406 MYL10Q9BUA6 226 aa17.73■□□□□ 0.43
CDR2-206ENST00000567406 RIOX1Q9H6W3 641 aa17.73■□□□□ 0.43
CDR2-206ENST00000567406 XIRP2A4UGR9 3374 aa17.73■□□□□ 0.43
CDR2-206ENST00000567406 ERICH2A1L162 156 aa17.72■□□□□ 0.43
CDR2-206ENST00000567406 EPOPA6NHQ4 379 aa17.72■□□□□ 0.43
CDR2-206ENST00000567406 ACTN1P12814 892 aa17.72■□□□□ 0.43
CDR2-206ENST00000567406 RFC2P35250 354 aa17.72■□□□□ 0.43
CDR2-206ENST00000567406 GHRHRQ02643 423 aa17.72■□□□□ 0.43
CDR2-206ENST00000567406 TROAPQ12815 778 aa17.72■□□□□ 0.43
CDR2-206ENST00000567406 LAMC2Q13753 1193 aa17.72■□□□□ 0.43
CDR2-206ENST00000567406 HIC1Q14526 733 aa17.72■□□□□ 0.43
CDR2-206ENST00000567406 KIAA0753Q2KHM9 967 aa17.72■□□□□ 0.43
CDR2-206ENST00000567406 HSDL1Q3SXM5 330 aa17.72■□□□□ 0.43
CDR2-206ENST00000567406 SPRED2Q7Z698 418 aa17.72■□□□□ 0.43
CDR2-206ENST00000567406 VSIG10LQ86VR7 867 aa17.72■□□□□ 0.43
CDR2-206ENST00000567406 C7orf31Q8N865 590 aa17.72■□□□□ 0.43
CDR2-206ENST00000567406 NCOA7Q8NI08 942 aa17.72■□□□□ 0.43
CDR2-206ENST00000567406 PPTC7Q8NI37 304 aa17.72■□□□□ 0.43
CDR2-206ENST00000567406 IGDCC4Q8TDY8 1250 aa17.72■□□□□ 0.43
CDR2-206ENST00000567406 WNT8BQ93098 351 aa17.72■□□□□ 0.43
CDR2-206ENST00000567406 GTF2IRD1Q9UHL9 959 aa17.72■□□□□ 0.43
CDR2-206ENST00000567406 TANC1Q9C0D5 1861 aa17.71■□□□□ 0.43
CDR2-206ENST00000567406 GCOM1H8Y6P7 765 aaPredicted RBP17.71■□□□□ 0.43
CDR2-206ENST00000567406 GGPS1O95749 300 aa17.71■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms