RNA–Protein interactions for RNA: ENST00000567279.5

BBS4-213, Transcript of Bardet-Biedl syndrome 4, humanhuman

TSL 2

Gene BBS4, Length 1,876 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BBS4-213ENST00000567279 TBX3O15119 743 aa13.18□□□□□ -0.3
BBS4-213ENST00000567279 DSG3P32926 999 aa13.18□□□□□ -0.3
BBS4-213ENST00000567279 CCT6AP40227 531 aaKnown RBP13.18□□□□□ -0.3
BBS4-213ENST00000567279 STAT3P40763 770 aa13.18□□□□□ -0.3
BBS4-213ENST00000567279 FMR1Q06787 632 aaKnown RBP eCLIP13.18□□□□□ -0.3
BBS4-213ENST00000567279 TMEM119Q4V9L6 283 aa13.18□□□□□ -0.3
BBS4-213ENST00000567279 KLHL10Q6JEL2 608 aa13.18□□□□□ -0.3
BBS4-213ENST00000567279 DRC7Q8IY82 874 aa13.18□□□□□ -0.3
BBS4-213ENST00000567279 TRMT44Q8IYL2 757 aaKnown RBP13.18□□□□□ -0.3
BBS4-213ENST00000567279 CNKSR2Q8WXI2 1034 aa13.18□□□□□ -0.3
BBS4-213ENST00000567279 TAF1DQ9H5J8 278 aaPredicted RBP13.18□□□□□ -0.3
BBS4-213ENST00000567279 ELP3Q9H9T3 547 aa13.18□□□□□ -0.3
BBS4-213ENST00000567279 STK17AQ9UEE5 414 aa13.18□□□□□ -0.3
BBS4-213ENST00000567279 PNMA2Q9UL42 364 aa13.18□□□□□ -0.3
BBS4-213ENST00000567279 KDM3AQ9Y4C1 1321 aa13.18□□□□□ -0.3
BBS4-213ENST00000567279 SYNRGQ9UMZ2 1314 aa13.17□□□□□ -0.3
BBS4-213ENST00000567279 IQCA1LA6NCM1 817 aa13.17□□□□□ -0.3
BBS4-213ENST00000567279 MSH4O15457 936 aa13.17□□□□□ -0.3
BBS4-213ENST00000567279 MYL1P05976 194 aa13.17□□□□□ -0.3
BBS4-213ENST00000567279 CD44P16070 742 aaKnown RBP13.17□□□□□ -0.3
BBS4-213ENST00000567279 HS1BP3Q53T59 392 aa13.17□□□□□ -0.3
BBS4-213ENST00000567279 SH3D19Q5HYK7 790 aa13.17□□□□□ -0.3
BBS4-213ENST00000567279 NCAPH2Q6IBW4 605 aa13.17□□□□□ -0.3
BBS4-213ENST00000567279 CYP2W1Q8TAV3 490 aa13.17□□□□□ -0.3
BBS4-213ENST00000567279 RBM46Q8TBY0 533 aaKnown RBP13.17□□□□□ -0.3
BBS4-213ENST00000567279 TRERF1Q96PN7 1200 aa13.17□□□□□ -0.3
BBS4-213ENST00000567279 BLOC1S4Q9NUP1 217 aa13.17□□□□□ -0.3
BBS4-213ENST00000567279 COL20A1Q9P218 1284 aa13.17□□□□□ -0.3
BBS4-213ENST00000567279 IGLV3-22A0A075B6J6 115 aa13.16□□□□□ -0.3
BBS4-213ENST00000567279 ASIC1P78348 528 aa13.16□□□□□ -0.3
BBS4-213ENST00000567279 MCM6Q14566 821 aa13.16□□□□□ -0.3
BBS4-213ENST00000567279 COG2Q14746 738 aa13.16□□□□□ -0.3
BBS4-213ENST00000567279 SNRNP48Q6IEG0 339 aaKnown RBP13.16□□□□□ -0.3
BBS4-213ENST00000567279 SLC30A10Q6XR72 485 aa13.16□□□□□ -0.3
BBS4-213ENST00000567279 CATSPERGQ6ZRH7 1159 aa13.16□□□□□ -0.3
BBS4-213ENST00000567279 MOB2Q70IA6 237 aa13.16□□□□□ -0.3
BBS4-213ENST00000567279 SV2BQ7L1I2 683 aa13.16□□□□□ -0.3
BBS4-213ENST00000567279 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.16□□□□□ -0.3
BBS4-213ENST00000567279 REPS2Q8NFH8 660 aa13.16□□□□□ -0.3
BBS4-213ENST00000567279 LARP4BQ92615 738 aaKnown RBP13.16□□□□□ -0.3
BBS4-213ENST00000567279 RAD54LQ92698 747 aa13.16□□□□□ -0.3
BBS4-213ENST00000567279 FAM20AQ96MK3 541 aa13.16□□□□□ -0.3
BBS4-213ENST00000567279 RNF146Q9NTX7 359 aa13.16□□□□□ -0.3
BBS4-213ENST00000567279 CTNND2Q9UQB3 1225 aa13.16□□□□□ -0.3
BBS4-213ENST00000567279 POTEB3A0JP26 581 aa13.16□□□□□ -0.3
BBS4-213ENST00000567279 GOLGA6L6A8MZA4 724 aa13.16□□□□□ -0.3
BBS4-213ENST00000567279 POTECB2RU33 542 aa13.16□□□□□ -0.3
BBS4-213ENST00000567279 KLRC4O43908 158 aa13.16□□□□□ -0.3
BBS4-213ENST00000567279 CDC25BP30305 580 aa13.16□□□□□ -0.3
BBS4-213ENST00000567279 AMPD3Q01432 767 aa13.16□□□□□ -0.3
BBS4-213ENST00000567279 GHRHRQ02643 423 aa13.16□□□□□ -0.3
BBS4-213ENST00000567279 ECM1Q16610 540 aa13.16□□□□□ -0.3
BBS4-213ENST00000567279 KMT5BQ4FZB7 885 aa13.16□□□□□ -0.3
BBS4-213ENST00000567279 ZNF658Q5TYW1 1059 aaPredicted RBP13.16□□□□□ -0.3
BBS4-213ENST00000567279 POTEBQ6S5H4 581 aa13.16□□□□□ -0.3
BBS4-213ENST00000567279 NSMFQ6X4W1 530 aa13.16□□□□□ -0.3
BBS4-213ENST00000567279 GADL1Q6ZQY3 521 aa13.16□□□□□ -0.3
BBS4-213ENST00000567279 ERMNQ8TAM6 284 aa13.16□□□□□ -0.3
BBS4-213ENST00000567279 OTUD5Q96G74 571 aa13.16□□□□□ -0.3
BBS4-213ENST00000567279 MRFAP1L1Q96HT8 127 aa13.16□□□□□ -0.3
BBS4-213ENST00000567279 ZFP91Q96JP5 570 aaPredicted RBP13.16□□□□□ -0.3
BBS4-213ENST00000567279 CLMNQ96JQ2 1002 aa13.16□□□□□ -0.3
BBS4-213ENST00000567279 TRIM9Q9C026 710 aa13.16□□□□□ -0.3
BBS4-213ENST00000567279 A0A0G2JMZ2 1700 aa13.15□□□□□ -0.3
BBS4-213ENST00000567279 RPTORQ8N122 1335 aa13.15□□□□□ -0.3
BBS4-213ENST00000567279 PPP1R3GB7ZBB8 358 aa13.15□□□□□ -0.3
BBS4-213ENST00000567279 ATP1A3P13637 1013 aa13.15□□□□□ -0.3
BBS4-213ENST00000567279 ERCC5P28715 1186 aaPredicted RBP13.15□□□□□ -0.3
BBS4-213ENST00000567279 STX17P56962 302 aa13.15□□□□□ -0.3
BBS4-213ENST00000567279 SPIRE1Q08AE8 756 aa13.15□□□□□ -0.3
BBS4-213ENST00000567279 KCNB1Q14721 858 aa13.15□□□□□ -0.3
BBS4-213ENST00000567279 CEP55Q53EZ4 464 aa13.15□□□□□ -0.3
BBS4-213ENST00000567279 CT47A1Q5JQC4 288 aaPredicted RBP13.15□□□□□ -0.3
BBS4-213ENST00000567279 HAUS3Q68CZ6 603 aa13.15□□□□□ -0.3
BBS4-213ENST00000567279 KCNK18Q7Z418 384 aa13.15□□□□□ -0.3
BBS4-213ENST00000567279 ANKRD13AQ8IZ07 590 aa13.15□□□□□ -0.3
BBS4-213ENST00000567279 ENOX1Q8TC92 643 aaKnown RBP13.15□□□□□ -0.3
BBS4-213ENST00000567279 SYTL5Q8TDW5 730 aaPredicted RBP13.15□□□□□ -0.3
BBS4-213ENST00000567279 CCDC47Q96A33 483 aaKnown RBP13.15□□□□□ -0.3
BBS4-213ENST00000567279 C7orf25Q9BPX7 421 aa13.15□□□□□ -0.3
BBS4-213ENST00000567279 NT5C3AQ9H0P0 336 aa13.15□□□□□ -0.3
BBS4-213ENST00000567279 HSD3B7Q9H2F3 369 aa13.15□□□□□ -0.3
BBS4-213ENST00000567279 EXOC1Q9NV70 894 aa13.15□□□□□ -0.3
BBS4-213ENST00000567279 FANCLQ9NW38 375 aa13.15□□□□□ -0.3
BBS4-213ENST00000567279 IFNKQ9P0W0 207 aa13.15□□□□□ -0.3
BBS4-213ENST00000567279 VAV3Q9UKW4 847 aa13.15□□□□□ -0.3
BBS4-213ENST00000567279 GDAQ9Y2T3 454 aa13.15□□□□□ -0.3
BBS4-213ENST00000567279 RABGAP1Q9Y3P9 1069 aa13.15□□□□□ -0.3
BBS4-213ENST00000567279 NFE2L3Q9Y4A8 694 aa13.15□□□□□ -0.3
BBS4-213ENST00000567279 SPDYE16A6NNV3 312 aaPredicted RBP13.14□□□□□ -0.31
BBS4-213ENST00000567279 ESPNB1AK53 854 aa13.14□□□□□ -0.31
BBS4-213ENST00000567279 SLC26A4O43511 780 aa13.14□□□□□ -0.31
BBS4-213ENST00000567279 OAZ1P54368 228 aa13.14□□□□□ -0.31
BBS4-213ENST00000567279 RPS6P62753 249 aaKnown RBP13.14□□□□□ -0.31
BBS4-213ENST00000567279 FANCCQ00597 558 aa13.14□□□□□ -0.31
BBS4-213ENST00000567279 SETQ01105 290 aaPredicted RBP13.14□□□□□ -0.31
BBS4-213ENST00000567279 TMEM132BQ14DG7 1078 aa13.14□□□□□ -0.31
BBS4-213ENST00000567279 HYIQ5T013 277 aa13.14□□□□□ -0.31
BBS4-213ENST00000567279 TREML2Q5T2D2 321 aa13.14□□□□□ -0.31
BBS4-213ENST00000567279 IL31RAQ8NI17 732 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms