RNA–Protein interactions for RNA: ENST00000566926.1

CLK3-218, Transcript of CDC like kinase 3, humanhuman

TSL 5

Gene CLK3, Length 646 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-218ENST00000566926 TMX3Q96JJ7 454 aa15.43■□□□□ 0.06
CLK3-218ENST00000566926 POLR3EQ9NVU0 708 aa15.43■□□□□ 0.06
CLK3-218ENST00000566926 RBM27Q9P2N5 1060 aaKnown RBP15.43■□□□□ 0.06
CLK3-218ENST00000566926 ZMYND8Q9ULU4 1186 aaPredicted RBP15.43■□□□□ 0.06
CLK3-218ENST00000566926 DNAH12Q6ZR08 3092 aa15.43■□□□□ 0.06
CLK3-218ENST00000566926 A0A0U1RQG5 324 aaPredicted RBP15.42■□□□□ 0.06
CLK3-218ENST00000566926 PIK3CDO00329 1044 aa15.42■□□□□ 0.06
CLK3-218ENST00000566926 STAM2O75886 525 aa15.42■□□□□ 0.06
CLK3-218ENST00000566926 MYCLP12524 364 aaPredicted RBP15.42■□□□□ 0.06
CLK3-218ENST00000566926 BEX3Q00994 111 aa15.42■□□□□ 0.06
CLK3-218ENST00000566926 PGM5Q15124 567 aa15.42■□□□□ 0.06
CLK3-218ENST00000566926 TRIM60Q495X7 471 aa15.42■□□□□ 0.06
CLK3-218ENST00000566926 SEPT14Q6ZU15 432 aa15.42■□□□□ 0.06
CLK3-218ENST00000566926 PSTPIP2Q9H939 334 aa15.42■□□□□ 0.06
CLK3-218ENST00000566926 CNTNAP5Q8WYK1 1306 aa15.42■□□□□ 0.06
CLK3-218ENST00000566926 NID2Q14112 1375 aa15.41■□□□□ 0.06
CLK3-218ENST00000566926 DCDC2CA8MYV0 355 aa15.41■□□□□ 0.06
CLK3-218ENST00000566926 CTAGE5O15320 804 aa15.41■□□□□ 0.06
CLK3-218ENST00000566926 KPNA6O60684 536 aa15.41■□□□□ 0.06
CLK3-218ENST00000566926 CUL4AQ13619 759 aa15.41■□□□□ 0.06
CLK3-218ENST00000566926 PPP1R18Q6NYC8 613 aa15.41■□□□□ 0.06
CLK3-218ENST00000566926 XRRA1Q6P2D8 792 aa15.41■□□□□ 0.06
CLK3-218ENST00000566926 CHRDL2Q6WN34 429 aa15.41■□□□□ 0.06
CLK3-218ENST00000566926 HEATR3Q7Z4Q2 680 aa15.41■□□□□ 0.06
CLK3-218ENST00000566926 VSIG10LQ86VR7 867 aa15.41■□□□□ 0.06
CLK3-218ENST00000566926 TOX2Q96NM4 488 aa15.41■□□□□ 0.06
CLK3-218ENST00000566926 LBHD1Q9BQE6 289 aaPredicted RBP15.41■□□□□ 0.06
CLK3-218ENST00000566926 GLT8D2Q9H1C3 349 aa15.41■□□□□ 0.06
CLK3-218ENST00000566926 COLQQ9Y215 455 aaPredicted RBP15.41■□□□□ 0.06
CLK3-218ENST00000566926 V9GY48 417 aaPredicted RBP15.41■□□□□ 0.06
CLK3-218ENST00000566926 TRIOBPQ9H2D6 2365 aa15.41■□□□□ 0.06
CLK3-218ENST00000566926 A0A1W2PPC1 479 aa15.4■□□□□ 0.06
CLK3-218ENST00000566926 hCG_1642624A0A1W2PR95 340 aa15.4■□□□□ 0.06
CLK3-218ENST00000566926 TLR3O15455 904 aaKnown RBP15.4■□□□□ 0.06
CLK3-218ENST00000566926 GH1P01241 217 aa15.4■□□□□ 0.06
CLK3-218ENST00000566926 TGFB3P10600 412 aa15.4■□□□□ 0.06
CLK3-218ENST00000566926 SYN1P17600 705 aa15.4■□□□□ 0.06
CLK3-218ENST00000566926 CDC27P30260 824 aa15.4■□□□□ 0.06
CLK3-218ENST00000566926 ADD1P35611 737 aaKnown RBP15.4■□□□□ 0.06
CLK3-218ENST00000566926 EVCP57679 992 aa15.4■□□□□ 0.06
CLK3-218ENST00000566926 IRX5P78411 483 aaPredicted RBP15.4■□□□□ 0.06
CLK3-218ENST00000566926 AKAP17AQ02040 695 aaKnown RBP15.4■□□□□ 0.06
CLK3-218ENST00000566926 TLE2Q04725 743 aa15.4■□□□□ 0.06
CLK3-218ENST00000566926 GNPTABQ3T906 1256 aa15.4■□□□□ 0.06
CLK3-218ENST00000566926 CCDC62Q6P9F0 684 aa15.4■□□□□ 0.06
CLK3-218ENST00000566926 ANKRD33Q7Z3H0 272 aa15.4■□□□□ 0.06
CLK3-218ENST00000566926 EHMT1Q9H9B1 1298 aa15.4■□□□□ 0.06
CLK3-218ENST00000566926 FAM217BQ9NTX9 383 aaPredicted RBP15.4■□□□□ 0.06
CLK3-218ENST00000566926 CIZ1Q9ULV3 898 aaPredicted RBP15.4■□□□□ 0.06
CLK3-218ENST00000566926 ZSCAN21Q9Y5A6 473 aaPredicted RBP15.4■□□□□ 0.06
CLK3-218ENST00000566926 MRVI1Q9Y6F6 885 aa15.4■□□□□ 0.06
CLK3-218ENST00000566926 SCN10AQ9Y5Y9 1956 aa15.4■□□□□ 0.06
CLK3-218ENST00000566926 FRMPD4Q14CM0 1322 aa15.4■□□□□ 0.06
CLK3-218ENST00000566926 SPDYE3A6NKU9 549 aa15.39■□□□□ 0.05
CLK3-218ENST00000566926 ARVCFO00192 962 aa15.39■□□□□ 0.05
CLK3-218ENST00000566926 MEIS2O14770 477 aa15.39■□□□□ 0.05
CLK3-218ENST00000566926 PQBP1O60828 265 aaKnown RBP15.39■□□□□ 0.05
CLK3-218ENST00000566926 CLTBP09497 229 aa15.39■□□□□ 0.05
CLK3-218ENST00000566926 PDIA4P13667 645 aaKnown RBP15.39■□□□□ 0.05
CLK3-218ENST00000566926 BMP8BP34820 402 aa15.39■□□□□ 0.05
CLK3-218ENST00000566926 NAPAP54920 295 aa15.39■□□□□ 0.05
CLK3-218ENST00000566926 FUT2Q10981 343 aa15.39■□□□□ 0.05
CLK3-218ENST00000566926 TMEM63BQ5T3F8 832 aa15.39■□□□□ 0.05
CLK3-218ENST00000566926 USP17L6PQ6QN14 398 aa15.39■□□□□ 0.05
CLK3-218ENST00000566926 CXCL17Q6UXB2 119 aa15.39■□□□□ 0.05
CLK3-218ENST00000566926 ZNF274Q96GC6 653 aaPredicted RBP15.39■□□□□ 0.05
CLK3-218ENST00000566926 PRDM5Q9NQX1 630 aaPredicted RBP15.39■□□□□ 0.05
CLK3-218ENST00000566926 DDX41Q9UJV9 622 aaKnown RBP15.39■□□□□ 0.05
CLK3-218ENST00000566926 LTBP2Q14767 1821 aa15.38■□□□□ 0.05
CLK3-218ENST00000566926 A6NJR5 290 aa15.38■□□□□ 0.05
CLK3-218ENST00000566926 ARIH2O95376 493 aa15.38■□□□□ 0.05
CLK3-218ENST00000566926 PDIA3P30101 505 aaKnown RBP15.38■□□□□ 0.05
CLK3-218ENST00000566926 CDK7P50613 346 aa15.38■□□□□ 0.05
CLK3-218ENST00000566926 LAMC2Q13753 1193 aa15.38■□□□□ 0.05
CLK3-218ENST00000566926 TOB2Q14106 344 aaPredicted RBP15.38■□□□□ 0.05
CLK3-218ENST00000566926 LY6KQ17RY6 165 aa15.38■□□□□ 0.05
CLK3-218ENST00000566926 HABP4Q5JVS0 413 aaKnown RBP15.38■□□□□ 0.05
CLK3-218ENST00000566926 PCNX4Q63HM2 1172 aa15.38■□□□□ 0.05
CLK3-218ENST00000566926 WWC2Q6AWC2 1192 aa15.38■□□□□ 0.05
CLK3-218ENST00000566926 CPLX2Q6PUV4 134 aaKnown RBP15.38■□□□□ 0.05
CLK3-218ENST00000566926 DHX37Q8IY37 1157 aaKnown RBP15.38■□□□□ 0.05
CLK3-218ENST00000566926 CCDC12Q8WUD4 166 aaPredicted RBP15.38■□□□□ 0.05
CLK3-218ENST00000566926 GPKOWQ92917 476 aaPredicted RBP eCLIP15.38■□□□□ 0.05
CLK3-218ENST00000566926 GDF15Q99988 308 aa15.38■□□□□ 0.05
CLK3-218ENST00000566926 MTG1Q9BT17 334 aaPredicted RBP15.38■□□□□ 0.05
CLK3-218ENST00000566926 PDLIM7Q9NR12 457 aa15.38■□□□□ 0.05
CLK3-218ENST00000566926 BARHL2Q9NY43 387 aa15.38■□□□□ 0.05
CLK3-218ENST00000566926 KAT6AQ92794 2004 aa15.38■□□□□ 0.05
CLK3-218ENST00000566926 PRPF3O43395 683 aaKnown RBP15.37■□□□□ 0.05
CLK3-218ENST00000566926 FOSP01100 380 aaPredicted RBP15.37■□□□□ 0.05
CLK3-218ENST00000566926 MYL3P08590 195 aa15.37■□□□□ 0.05
CLK3-218ENST00000566926 SCG2P13521 617 aa15.37■□□□□ 0.05
CLK3-218ENST00000566926 MAGEA10P43363 369 aaPredicted RBP15.37■□□□□ 0.05
CLK3-218ENST00000566926 ADCY7P51828 1080 aa15.37■□□□□ 0.05
CLK3-218ENST00000566926 PURAQ00577 322 aaKnown RBP15.37■□□□□ 0.05
CLK3-218ENST00000566926 ITGA7Q13683 1181 aa15.37■□□□□ 0.05
CLK3-218ENST00000566926 PFKFB3Q16875 520 aaPredicted RBP15.37■□□□□ 0.05
CLK3-218ENST00000566926 NLRX1Q86UT6 975 aa15.37■□□□□ 0.05
CLK3-218ENST00000566926 SLC43A3Q8NBI5 491 aa15.37■□□□□ 0.05
CLK3-218ENST00000566926 COPS5Q92905 334 aa15.37■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms