RNA–Protein interactions for RNA: ENST00000566811.5

RNF40-210, Transcript of ring finger protein 40, humanhuman

TSL 2

Gene RNF40, Length 569 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-210ENST00000566811 KRT25Q7Z3Z0 450 aa23.19■■□□□ 1.3
RNF40-210ENST00000566811 SCFD2Q8WU76 684 aa23.19■■□□□ 1.3
RNF40-210ENST00000566811 SHISA4Q96DD7 197 aa23.19■■□□□ 1.3
RNF40-210ENST00000566811 RNF208Q9H0X6 261 aa23.19■■□□□ 1.3
RNF40-210ENST00000566811 RBM47A0AV96 593 aaKnown RBP23.18■■□□□ 1.3
RNF40-210ENST00000566811 NKRFO15226 690 aaKnown RBP eCLIP23.18■■□□□ 1.3
RNF40-210ENST00000566811 PDCP20941 246 aa23.18■■□□□ 1.3
RNF40-210ENST00000566811 NPY5RQ15761 445 aa23.18■■□□□ 1.3
RNF40-210ENST00000566811 IQSEC1Q6DN90 963 aa23.18■■□□□ 1.3
RNF40-210ENST00000566811 FBXO18Q8NFZ0 1043 aa23.18■■□□□ 1.3
RNF40-210ENST00000566811 CDHR1Q96JP9 859 aa23.18■■□□□ 1.3
RNF40-210ENST00000566811 UNC93B1Q9H1C4 597 aa23.18■■□□□ 1.3
RNF40-210ENST00000566811 DDX20Q9UHI6 824 aaKnown RBP23.18■■□□□ 1.3
RNF40-210ENST00000566811 M0R2N6 131 aa23.17■■□□□ 1.3
RNF40-210ENST00000566811 GJB2P29033 226 aa23.17■■□□□ 1.3
RNF40-210ENST00000566811 CNGA1P29973 690 aa23.17■■□□□ 1.3
RNF40-210ENST00000566811 BECN1Q14457 450 aa23.17■■□□□ 1.3
RNF40-210ENST00000566811 KRT40Q6A162 431 aa23.17■■□□□ 1.3
RNF40-210ENST00000566811 FBXO16Q8IX29 292 aaPredicted RBP23.17■■□□□ 1.3
RNF40-210ENST00000566811 INPP4AQ96PE3 977 aaPredicted RBP23.17■■□□□ 1.3
RNF40-210ENST00000566811 CYP3A4P08684 503 aa23.16■■□□□ 1.3
RNF40-210ENST00000566811 TGFB3P10600 412 aa23.16■■□□□ 1.3
RNF40-210ENST00000566811 RARBP10826 455 aa23.16■■□□□ 1.3
RNF40-210ENST00000566811 PDIA4P13667 645 aaKnown RBP23.16■■□□□ 1.3
RNF40-210ENST00000566811 CCND3P30281 292 aaPredicted RBP23.16■■□□□ 1.3
RNF40-210ENST00000566811 TTLL4Q14679 1199 aa23.16■■□□□ 1.3
RNF40-210ENST00000566811 MTFR1Q15390 333 aa23.16■■□□□ 1.3
RNF40-210ENST00000566811 CCDC144BQ3MJ40 725 aa23.16■■□□□ 1.3
RNF40-210ENST00000566811 JAKMIP3Q5VZ66 844 aa23.16■■□□□ 1.3
RNF40-210ENST00000566811 NLRX1Q86UT6 975 aa23.16■■□□□ 1.3
RNF40-210ENST00000566811 TRPV1Q8NER1 839 aa23.16■■□□□ 1.3
RNF40-210ENST00000566811 KCNJ14Q9UNX9 436 aa23.16■■□□□ 1.3
RNF40-210ENST00000566811 Q9Y3F1 56 aa23.16■■□□□ 1.3
RNF40-210ENST00000566811 CCDC194A0A1B0GVG4 234 aa23.15■■□□□ 1.3
RNF40-210ENST00000566811 MAFGO15525 162 aa23.15■■□□□ 1.3
RNF40-210ENST00000566811 MYCLP12524 364 aaPredicted RBP23.15■■□□□ 1.3
RNF40-210ENST00000566811 GJA8P48165 433 aa23.15■■□□□ 1.3
RNF40-210ENST00000566811 NONOQ15233 471 aaKnown RBP eCLIP23.15■■□□□ 1.3
RNF40-210ENST00000566811 TAPT1Q6NXT6 567 aa23.15■■□□□ 1.3
RNF40-210ENST00000566811 NIPA1Q7RTP0 329 aa23.15■■□□□ 1.3
RNF40-210ENST00000566811 IL31RAQ8NI17 732 aa23.15■■□□□ 1.3
RNF40-210ENST00000566811 GPRASP2Q96D09 838 aa23.15■■□□□ 1.3
RNF40-210ENST00000566811 NAP1L4Q99733 375 aaKnown RBP23.15■■□□□ 1.3
RNF40-210ENST00000566811 FIBPO43427 364 aa23.14■■□□□ 1.29
RNF40-210ENST00000566811 DUSP11O75319 330 aaKnown RBP23.14■■□□□ 1.29
RNF40-210ENST00000566811 HSP90AA1P07900 732 aaKnown RBP23.14■■□□□ 1.29
RNF40-210ENST00000566811 FXR1P51114 621 aaKnown RBP eCLIP23.14■■□□□ 1.29
RNF40-210ENST00000566811 USP11P51784 963 aa23.14■■□□□ 1.29
RNF40-210ENST00000566811 ARHGAP4P98171 946 aa23.14■■□□□ 1.29
RNF40-210ENST00000566811 SETQ01105 290 aaPredicted RBP23.14■■□□□ 1.29
RNF40-210ENST00000566811 TNFAIP2Q03169 654 aa23.14■■□□□ 1.29
RNF40-210ENST00000566811 DIS3L2Q8IYB7 885 aaKnown RBP23.14■■□□□ 1.29
RNF40-210ENST00000566811 CRYGNQ8WXF5 182 aa23.14■■□□□ 1.29
RNF40-210ENST00000566811 FOXP1Q9H334 677 aaPredicted RBP23.14■■□□□ 1.29
RNF40-210ENST00000566811 SPC25Q9HBM1 224 aa23.14■■□□□ 1.29
RNF40-210ENST00000566811 TMEM260Q9NX78 707 aa23.14■■□□□ 1.29
RNF40-210ENST00000566811 ICAM3P32942 547 aa23.13■■□□□ 1.29
RNF40-210ENST00000566811 MRPS9P82933 396 aaKnown RBP23.13■■□□□ 1.29
RNF40-210ENST00000566811 DUSP28Q4G0W2 176 aa23.13■■□□□ 1.29
RNF40-210ENST00000566811 PRAMEF19Q5SWL8 479 aa23.13■■□□□ 1.29
RNF40-210ENST00000566811 MOXD1Q6UVY6 613 aa23.13■■□□□ 1.29
RNF40-210ENST00000566811 EEPD1Q7L9B9 569 aa23.13■■□□□ 1.29
RNF40-210ENST00000566811 ANKLE1Q8NAG6 615 aa23.13■■□□□ 1.29
RNF40-210ENST00000566811 WDR11Q9BZH6 1224 aa23.13■■□□□ 1.29
RNF40-210ENST00000566811 CRISPLD2Q9H0B8 497 aa23.13■■□□□ 1.29
RNF40-210ENST00000566811 MRVI1Q9Y6F6 885 aa23.13■■□□□ 1.29
RNF40-210ENST00000566811 H3BQV1 296 aa23.12■■□□□ 1.29
RNF40-210ENST00000566811 SGPL1O95470 568 aa23.12■■□□□ 1.29
RNF40-210ENST00000566811 MYCP01106 439 aaPredicted RBP23.12■■□□□ 1.29
RNF40-210ENST00000566811 GIMAP8Q8ND71 665 aaPredicted RBP23.12■■□□□ 1.29
RNF40-210ENST00000566811 U2AF1L4Q8WU68 220 aaKnown RBP23.12■■□□□ 1.29
RNF40-210ENST00000566811 DEFB118Q96PH6 123 aa23.12■■□□□ 1.29
RNF40-210ENST00000566811 UBIAD1Q9Y5Z9 338 aa23.12■■□□□ 1.29
RNF40-210ENST00000566811 GCFC2P16383 781 aaKnown RBP23.11■■□□□ 1.29
RNF40-210ENST00000566811 CIITAP33076 1130 aa23.11■■□□□ 1.29
RNF40-210ENST00000566811 ADCYAP1R1P41586 468 aa23.11■■□□□ 1.29
RNF40-210ENST00000566811 GNL2Q13823 731 aaKnown RBP23.11■■□□□ 1.29
RNF40-210ENST00000566811 CEP55Q53EZ4 464 aa23.11■■□□□ 1.29
RNF40-210ENST00000566811 LHX8Q68G74 356 aa23.11■■□□□ 1.29
RNF40-210ENST00000566811 RASGRP4Q8TDF6 673 aa23.11■■□□□ 1.29
RNF40-210ENST00000566811 TBCKQ8TEA7 893 aa23.11■■□□□ 1.29
RNF40-210ENST00000566811 PGBD1Q96JS3 809 aa23.11■■□□□ 1.29
RNF40-210ENST00000566811 XPNPEP3Q9NQH7 507 aa23.11■■□□□ 1.29
RNF40-210ENST00000566811 GJB4Q9NTQ9 266 aa23.11■■□□□ 1.29
RNF40-210ENST00000566811 OGDHLQ9ULD0 1010 aa23.11■■□□□ 1.29
RNF40-210ENST00000566811 COLQQ9Y215 455 aaPredicted RBP23.11■■□□□ 1.29
RNF40-210ENST00000566811 CEP290O15078 2479 aa23.11■■□□□ 1.29
RNF40-210ENST00000566811 TXNP10599 105 aaKnown RBP23.1■■□□□ 1.29
RNF40-210ENST00000566811 ZNF76P36508 570 aa23.1■■□□□ 1.29
RNF40-210ENST00000566811 NKX3-2P78367 333 aa23.1■■□□□ 1.29
RNF40-210ENST00000566811 MTMR1Q13613 665 aa23.1■■□□□ 1.29
RNF40-210ENST00000566811 SEPT14Q6ZU15 432 aa23.1■■□□□ 1.29
RNF40-210ENST00000566811 RNF180Q86T96 592 aa23.1■■□□□ 1.29
RNF40-210ENST00000566811 TLK2Q86UE8 772 aa23.1■■□□□ 1.29
RNF40-210ENST00000566811 ARRDC4Q8NCT1 418 aa23.1■■□□□ 1.29
RNF40-210ENST00000566811 TNFRSF25Q93038 417 aa23.1■■□□□ 1.29
RNF40-210ENST00000566811 EMID1Q96A84 441 aaPredicted RBP23.1■■□□□ 1.29
RNF40-210ENST00000566811 SENP7Q9BQF6 1050 aa23.1■■□□□ 1.29
RNF40-210ENST00000566811 MXRA8Q9BRK3 442 aa23.1■■□□□ 1.29
RNF40-210ENST00000566811 UPF3AQ9H1J1 476 aaKnown RBP23.1■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms