RNA–Protein interactions for RNA: ENST00000566200.1

ABCA3-204, Transcript of ATP binding cassette subfamily A member 3, humanhuman

TSL 3

Gene ABCA3, Length 1,232 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3-204ENST00000566200 CHMP4BP1P59074 171 aa21.94■■□□□ 1.1
ABCA3-204ENST00000566200 STXBP2Q15833 593 aa21.94■■□□□ 1.1
ABCA3-204ENST00000566200 CCDC85BQ15834 202 aaPredicted RBP21.94■■□□□ 1.1
ABCA3-204ENST00000566200 IFIT1BQ5T764 474 aaKnown RBP21.94■■□□□ 1.1
ABCA3-204ENST00000566200 GDF6Q6KF10 455 aaPredicted RBP21.94■■□□□ 1.1
ABCA3-204ENST00000566200 SESTD1Q86VW0 696 aa21.94■■□□□ 1.1
ABCA3-204ENST00000566200 SYMPKQ92797 1274 aaKnown RBP21.94■■□□□ 1.1
ABCA3-204ENST00000566200 PXMP2Q9NR77 195 aa21.94■■□□□ 1.1
ABCA3-204ENST00000566200 MAD2L2Q9UI95 211 aa21.94■■□□□ 1.1
ABCA3-204ENST00000566200 DDX41Q9UJV9 622 aaKnown RBP21.94■■□□□ 1.1
ABCA3-204ENST00000566200 CFBP00751 764 aa21.93■■□□□ 1.1
ABCA3-204ENST00000566200 NR3C2P08235 984 aa21.93■■□□□ 1.1
ABCA3-204ENST00000566200 GPNMBQ14956 572 aa21.93■■□□□ 1.1
ABCA3-204ENST00000566200 PTGISQ16647 500 aa21.93■■□□□ 1.1
ABCA3-204ENST00000566200 ARHGEF16Q5VV41 709 aa21.93■■□□□ 1.1
ABCA3-204ENST00000566200 CHST3Q7LGC8 479 aa21.93■■□□□ 1.1
ABCA3-204ENST00000566200 RETREG2Q8NC44 543 aa21.93■■□□□ 1.1
ABCA3-204ENST00000566200 DHX38Q92620 1227 aaKnown RBP21.93■■□□□ 1.1
ABCA3-204ENST00000566200 AMNQ9BXJ7 453 aa21.93■■□□□ 1.1
ABCA3-204ENST00000566200 PALM3A6NDB9 673 aaPredicted RBP21.92■■□□□ 1.1
ABCA3-204ENST00000566200 KLRF2D3W0D1 207 aa21.92■■□□□ 1.1
ABCA3-204ENST00000566200 RGS20O76081 388 aa21.92■■□□□ 1.1
ABCA3-204ENST00000566200 ARHGEF15O94989 841 aa21.92■■□□□ 1.1
ABCA3-204ENST00000566200 TTC22Q5TAA0 569 aa21.92■■□□□ 1.1
ABCA3-204ENST00000566200 TAF6LQ9Y6J9 622 aa21.92■■□□□ 1.1
ABCA3-204ENST00000566200 EIF3JO75822 258 aaKnown RBP21.91■■□□□ 1.1
ABCA3-204ENST00000566200 CA3P07451 260 aa21.91■■□□□ 1.1
ABCA3-204ENST00000566200 BFSP2Q13515 415 aa21.91■■□□□ 1.1
ABCA3-204ENST00000566200 TMEM67Q5HYA8 995 aa21.91■■□□□ 1.1
ABCA3-204ENST00000566200 ATXN2LQ8WWM7 1075 aaKnown RBP21.91■■□□□ 1.1
ABCA3-204ENST00000566200 EMID1Q96A84 441 aaPredicted RBP21.91■■□□□ 1.1
ABCA3-204ENST00000566200 SENP2Q9HC62 589 aa21.91■■□□□ 1.1
ABCA3-204ENST00000566200 THEGQ9P2T0 379 aa21.91■■□□□ 1.1
ABCA3-204ENST00000566200 NOD1Q9Y239 953 aa21.91■■□□□ 1.1
ABCA3-204ENST00000566200 TRANK1O15050 2925 aa21.9■■□□□ 1.1
ABCA3-204ENST00000566200 RFXAPO00287 272 aa21.9■■□□□ 1.1
ABCA3-204ENST00000566200 CYP21A2P08686 494 aa21.9■■□□□ 1.1
ABCA3-204ENST00000566200 ACTN1P12814 892 aa21.9■■□□□ 1.1
ABCA3-204ENST00000566200 CASTP20810 708 aaKnown RBP21.9■■□□□ 1.1
ABCA3-204ENST00000566200 PTH1RQ03431 593 aa21.9■■□□□ 1.1
ABCA3-204ENST00000566200 IL31RAQ8NI17 732 aa21.9■■□□□ 1.1
ABCA3-204ENST00000566200 ASB2Q96Q27 587 aa21.9■■□□□ 1.1
ABCA3-204ENST00000566200 SLC9A7Q96T83 725 aa21.9■■□□□ 1.1
ABCA3-204ENST00000566200 PDCD2LQ9BRP1 358 aa21.9■■□□□ 1.1
ABCA3-204ENST00000566200 FTOQ9C0B1 505 aaKnown RBP eCLIP21.9■■□□□ 1.1
ABCA3-204ENST00000566200 TTC28Q96AY4 2481 aa21.89■■□□□ 1.1
ABCA3-204ENST00000566200 EPOPA6NHQ4 379 aa21.89■■□□□ 1.09
ABCA3-204ENST00000566200 ZBTB5O15062 677 aa21.89■■□□□ 1.09
ABCA3-204ENST00000566200 HOXA13P31271 388 aaPredicted RBP21.89■■□□□ 1.09
ABCA3-204ENST00000566200 DGKDQ16760 1214 aa21.89■■□□□ 1.09
ABCA3-204ENST00000566200 STOX1Q6ZVD7 989 aa21.89■■□□□ 1.09
ABCA3-204ENST00000566200 HERC6Q8IVU3 1022 aa21.89■■□□□ 1.09
ABCA3-204ENST00000566200 CAGE1Q8TC20 777 aa21.89■■□□□ 1.09
ABCA3-204ENST00000566200 PHOSPHO2Q8TCD6 241 aa21.89■■□□□ 1.09
ABCA3-204ENST00000566200 AFAP1L1Q8TED9 768 aa21.89■■□□□ 1.09
ABCA3-204ENST00000566200 HDAC6Q9UBN7 1215 aa21.89■■□□□ 1.09
ABCA3-204ENST00000566200 GTF2IRD1Q9UHL9 959 aa21.89■■□□□ 1.09
ABCA3-204ENST00000566200 PCDHA1Q9Y5I3 950 aa21.89■■□□□ 1.09
ABCA3-204ENST00000566200 MRVI1Q9Y6F6 885 aa21.89■■□□□ 1.09
ABCA3-204ENST00000566200 HAS3O00219 553 aa21.88■■□□□ 1.09
ABCA3-204ENST00000566200 CYTH3O43739 400 aa21.88■■□□□ 1.09
ABCA3-204ENST00000566200 F2P00734 622 aa21.88■■□□□ 1.09
ABCA3-204ENST00000566200 ZNF286BP0CG31 522 aa21.88■■□□□ 1.09
ABCA3-204ENST00000566200 HOXD8P13378 290 aaPredicted RBP21.88■■□□□ 1.09
ABCA3-204ENST00000566200 PSEN2P49810 448 aa21.88■■□□□ 1.09
ABCA3-204ENST00000566200 RBL2Q08999 1139 aa21.88■■□□□ 1.09
ABCA3-204ENST00000566200 GRM4Q14833 912 aa21.88■■□□□ 1.09
ABCA3-204ENST00000566200 TCTN1Q2MV58 587 aa21.88■■□□□ 1.09
ABCA3-204ENST00000566200 PPTC7Q8NI37 304 aa21.88■■□□□ 1.09
ABCA3-204ENST00000566200 RIOX1Q9H6W3 641 aa21.88■■□□□ 1.09
ABCA3-204ENST00000566200 CERS4Q9HA82 394 aa21.88■■□□□ 1.09
ABCA3-204ENST00000566200 BAZ2BQ9UIF8 2168 aaKnown RBP21.87■■□□□ 1.09
ABCA3-204ENST00000566200 CHMLP26374 656 aa21.87■■□□□ 1.09
ABCA3-204ENST00000566200 TAP1Q03518 808 aa21.87■■□□□ 1.09
ABCA3-204ENST00000566200 LAMC2Q13753 1193 aa21.87■■□□□ 1.09
ABCA3-204ENST00000566200 HIC1Q14526 733 aa21.87■■□□□ 1.09
ABCA3-204ENST00000566200 PGM5Q15124 567 aa21.87■■□□□ 1.09
ABCA3-204ENST00000566200 LRRC8DQ7L1W4 858 aa21.87■■□□□ 1.09
ABCA3-204ENST00000566200 SPRED2Q7Z698 418 aa21.87■■□□□ 1.09
ABCA3-204ENST00000566200 HOMER1Q86YM7 354 aa21.87■■□□□ 1.09
ABCA3-204ENST00000566200 WNT8BQ93098 351 aa21.87■■□□□ 1.09
ABCA3-204ENST00000566200 PIGSQ96S52 555 aa21.87■■□□□ 1.09
ABCA3-204ENST00000566200 ALG1Q9BT22 464 aa21.87■■□□□ 1.09
ABCA3-204ENST00000566200 MAP3K20Q9NYL2 800 aaKnown RBP21.87■■□□□ 1.09
ABCA3-204ENST00000566200 XIRP2A4UGR9 3374 aa21.87■■□□□ 1.09
ABCA3-204ENST00000566200 COL4A4P53420 1690 aaPredicted RBP21.87■■□□□ 1.09
ABCA3-204ENST00000566200 NBNO60934 754 aa21.86■■□□□ 1.09
ABCA3-204ENST00000566200 BAIAP3O94812 1187 aa21.86■■□□□ 1.09
ABCA3-204ENST00000566200 CKBP12277 381 aa21.86■■□□□ 1.09
ABCA3-204ENST00000566200 MYCLP12524 364 aaPredicted RBP21.86■■□□□ 1.09
ABCA3-204ENST00000566200 SELPP16109 830 aa21.86■■□□□ 1.09
ABCA3-204ENST00000566200 SP2Q02086 613 aa21.86■■□□□ 1.09
ABCA3-204ENST00000566200 MFSD10Q14728 455 aa21.86■■□□□ 1.09
ABCA3-204ENST00000566200 KIAA0753Q2KHM9 967 aa21.86■■□□□ 1.09
ABCA3-204ENST00000566200 TRIM71Q2Q1W2 868 aaKnown RBP21.86■■□□□ 1.09
ABCA3-204ENST00000566200 HSDL1Q3SXM5 330 aa21.86■■□□□ 1.09
ABCA3-204ENST00000566200 MYSM1Q5VVJ2 828 aa21.86■■□□□ 1.09
ABCA3-204ENST00000566200 TRAF7Q6Q0C0 670 aa21.86■■□□□ 1.09
ABCA3-204ENST00000566200 TMCO2Q7Z6W1 182 aaPredicted RBP21.86■■□□□ 1.09
ABCA3-204ENST00000566200 VSIG10LQ86VR7 867 aa21.86■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms