RNA–Protein interactions for RNA: ENST00000565966.5

HERPUD1-210, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 5

Gene HERPUD1, Length 798 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-210ENST00000565966 ELP1O95163 1332 aa15.91■□□□□ 0.14
HERPUD1-210ENST00000565966 hCG_1984214I3L0E3 225 aa15.9■□□□□ 0.14
HERPUD1-210ENST00000565966 PRPF3O43395 683 aaKnown RBP15.9■□□□□ 0.14
HERPUD1-210ENST00000565966 CABYRO75952 493 aa15.9■□□□□ 0.14
HERPUD1-210ENST00000565966 PTGS1P23219 599 aa15.9■□□□□ 0.14
HERPUD1-210ENST00000565966 CCND2P30279 289 aa15.9■□□□□ 0.14
HERPUD1-210ENST00000565966 CCDC62Q6P9F0 684 aa15.9■□□□□ 0.14
HERPUD1-210ENST00000565966 ZNF713Q8N859 430 aaPredicted RBP15.9■□□□□ 0.14
HERPUD1-210ENST00000565966 OR6J1Q8NGC5 347 aa15.9■□□□□ 0.14
HERPUD1-210ENST00000565966 PHKBQ93100 1093 aa15.9■□□□□ 0.14
HERPUD1-210ENST00000565966 VTI1AQ96AJ9 217 aa15.9■□□□□ 0.14
HERPUD1-210ENST00000565966 BACH2Q9BYV9 841 aa15.9■□□□□ 0.14
HERPUD1-210ENST00000565966 PFKFB2O60825 505 aa15.89■□□□□ 0.13
HERPUD1-210ENST00000565966 PPFIA3O75145 1194 aa15.89■□□□□ 0.13
HERPUD1-210ENST00000565966 ARIH2O95376 493 aa15.89■□□□□ 0.13
HERPUD1-210ENST00000565966 CPT1AP50416 773 aa15.89■□□□□ 0.13
HERPUD1-210ENST00000565966 SCRN1Q12765 414 aa15.89■□□□□ 0.13
HERPUD1-210ENST00000565966 PKN1Q16512 942 aa15.89■□□□□ 0.13
HERPUD1-210ENST00000565966 PFKFB3Q16875 520 aaPredicted RBP15.89■□□□□ 0.13
HERPUD1-210ENST00000565966 TRIM60Q495X7 471 aa15.89■□□□□ 0.13
HERPUD1-210ENST00000565966 BRDTQ58F21 947 aaPredicted RBP15.89■□□□□ 0.13
HERPUD1-210ENST00000565966 TYW1BQ6NUM6 668 aa15.89■□□□□ 0.13
HERPUD1-210ENST00000565966 KCNV1Q6PIU1 500 aa15.89■□□□□ 0.13
HERPUD1-210ENST00000565966 COPS5Q92905 334 aa15.89■□□□□ 0.13
HERPUD1-210ENST00000565966 RNF26Q9BY78 433 aaPredicted RBP15.89■□□□□ 0.13
HERPUD1-210ENST00000565966 SLKQ9H2G2 1235 aaPredicted RBP15.89■□□□□ 0.13
HERPUD1-210ENST00000565966 RBM27Q9P2N5 1060 aaKnown RBP15.89■□□□□ 0.13
HERPUD1-210ENST00000565966 ZMYND8Q9ULU4 1186 aaPredicted RBP15.89■□□□□ 0.13
HERPUD1-210ENST00000565966 FRMPD4Q14CM0 1322 aa15.89■□□□□ 0.13
HERPUD1-210ENST00000565966 DOCK5Q9H7D0 1870 aa15.88■□□□□ 0.13
HERPUD1-210ENST00000565966 STXBP3O00186 592 aa15.88■□□□□ 0.13
HERPUD1-210ENST00000565966 CPLX1O14810 134 aa15.88■□□□□ 0.13
HERPUD1-210ENST00000565966 STAM2O75886 525 aa15.88■□□□□ 0.13
HERPUD1-210ENST00000565966 LARGE1O95461 756 aa15.88■□□□□ 0.13
HERPUD1-210ENST00000565966 SCG2P13521 617 aa15.88■□□□□ 0.13
HERPUD1-210ENST00000565966 SYN1P17600 705 aa15.88■□□□□ 0.13
HERPUD1-210ENST00000565966 NAPAP54920 295 aa15.88■□□□□ 0.13
HERPUD1-210ENST00000565966 LY6KQ17RY6 165 aa15.88■□□□□ 0.13
HERPUD1-210ENST00000565966 PPP1R18Q6NYC8 613 aa15.88■□□□□ 0.13
HERPUD1-210ENST00000565966 CXCL17Q6UXB2 119 aa15.88■□□□□ 0.13
HERPUD1-210ENST00000565966 TEX2Q8IWB9 1127 aa15.88■□□□□ 0.13
HERPUD1-210ENST00000565966 IL31RAQ8NI17 732 aa15.88■□□□□ 0.13
HERPUD1-210ENST00000565966 TBC1D32Q96NH3 1257 aa15.88■□□□□ 0.13
HERPUD1-210ENST00000565966 SLC26A6Q9BXS9 759 aa15.88■□□□□ 0.13
HERPUD1-210ENST00000565966 POLR3EQ9NVU0 708 aa15.88■□□□□ 0.13
HERPUD1-210ENST00000565966 BARHL2Q9NY43 387 aa15.88■□□□□ 0.13
HERPUD1-210ENST00000565966 PRKAG2Q9UGJ0 569 aa15.88■□□□□ 0.13
HERPUD1-210ENST00000565966 DDX41Q9UJV9 622 aaKnown RBP15.88■□□□□ 0.13
HERPUD1-210ENST00000565966 MRVI1Q9Y6F6 885 aa15.88■□□□□ 0.13
HERPUD1-210ENST00000565966 SCN10AQ9Y5Y9 1956 aa15.87■□□□□ 0.13
HERPUD1-210ENST00000565966 A0A0U1RQG5 324 aaPredicted RBP15.87■□□□□ 0.13
HERPUD1-210ENST00000565966 RGS20O76081 388 aa15.87■□□□□ 0.13
HERPUD1-210ENST00000565966 GH1P01241 217 aa15.87■□□□□ 0.13
HERPUD1-210ENST00000565966 TGFB3P10600 412 aa15.87■□□□□ 0.13
HERPUD1-210ENST00000565966 AKAP17AQ02040 695 aaKnown RBP15.87■□□□□ 0.13
HERPUD1-210ENST00000565966 TLE2Q04725 743 aa15.87■□□□□ 0.13
HERPUD1-210ENST00000565966 ME3Q16798 604 aa15.87■□□□□ 0.13
HERPUD1-210ENST00000565966 XRRA1Q6P2D8 792 aa15.87■□□□□ 0.13
HERPUD1-210ENST00000565966 TOX2Q96NM4 488 aa15.87■□□□□ 0.13
HERPUD1-210ENST00000565966 SEZ6LQ9BYH1 1024 aa15.87■□□□□ 0.13
HERPUD1-210ENST00000565966 GLT8D2Q9H1C3 349 aa15.87■□□□□ 0.13
HERPUD1-210ENST00000565966 RIC8AQ9NPQ8 531 aa15.87■□□□□ 0.13
HERPUD1-210ENST00000565966 COLQQ9Y215 455 aaPredicted RBP15.87■□□□□ 0.13
HERPUD1-210ENST00000565966 MROH7Q68CQ1 1323 aa15.87■□□□□ 0.13
HERPUD1-210ENST00000565966 SMCO2A6NFE2 343 aa15.86■□□□□ 0.13
HERPUD1-210ENST00000565966 A6NJR5 290 aa15.86■□□□□ 0.13
HERPUD1-210ENST00000565966 SPDYE3A6NKU9 549 aa15.86■□□□□ 0.13
HERPUD1-210ENST00000565966 ARVCFO00192 962 aa15.86■□□□□ 0.13
HERPUD1-210ENST00000565966 KPNA6O60684 536 aa15.86■□□□□ 0.13
HERPUD1-210ENST00000565966 CDK7P50613 346 aa15.86■□□□□ 0.13
HERPUD1-210ENST00000565966 MRPS9P82933 396 aaKnown RBP15.86■□□□□ 0.13
HERPUD1-210ENST00000565966 SSRP1Q08945 709 aaKnown RBP15.86■□□□□ 0.13
HERPUD1-210ENST00000565966 RABEP1Q15276 862 aa15.86■□□□□ 0.13
HERPUD1-210ENST00000565966 UBE2SQ16763 222 aa15.86■□□□□ 0.13
HERPUD1-210ENST00000565966 GNPTABQ3T906 1256 aa15.86■□□□□ 0.13
HERPUD1-210ENST00000565966 PCNX4Q63HM2 1172 aa15.86■□□□□ 0.13
HERPUD1-210ENST00000565966 CPLX2Q6PUV4 134 aaKnown RBP15.86■□□□□ 0.13
HERPUD1-210ENST00000565966 CHRDL2Q6WN34 429 aa15.86■□□□□ 0.13
HERPUD1-210ENST00000565966 ANKRD33Q7Z3H0 272 aa15.86■□□□□ 0.13
HERPUD1-210ENST00000565966 ZFP91Q96JP5 570 aaPredicted RBP15.86■□□□□ 0.13
HERPUD1-210ENST00000565966 PCDHA6Q9UN73 950 aa15.86■□□□□ 0.13
HERPUD1-210ENST00000565966 PCDHA8Q9Y5H6 950 aa15.86■□□□□ 0.13
HERPUD1-210ENST00000565966 LTBP2Q14767 1821 aa15.85■□□□□ 0.13
HERPUD1-210ENST00000565966 DCDC2CA8MYV0 355 aa15.85■□□□□ 0.13
HERPUD1-210ENST00000565966 PQBP1O60828 265 aaKnown RBP15.85■□□□□ 0.13
HERPUD1-210ENST00000565966 CTDNEP1O95476 244 aa15.85■□□□□ 0.13
HERPUD1-210ENST00000565966 ADCY7P51828 1080 aa15.85■□□□□ 0.13
HERPUD1-210ENST00000565966 PURAQ00577 322 aaKnown RBP15.85■□□□□ 0.13
HERPUD1-210ENST00000565966 ARHGAP1Q07960 439 aa15.85■□□□□ 0.13
HERPUD1-210ENST00000565966 LAMC2Q13753 1193 aa15.85■□□□□ 0.13
HERPUD1-210ENST00000565966 TRIM22Q8IYM9 498 aa15.85■□□□□ 0.13
HERPUD1-210ENST00000565966 NECAB1Q8N987 351 aa15.85■□□□□ 0.13
HERPUD1-210ENST00000565966 GTF3C6Q969F1 213 aa15.85■□□□□ 0.13
HERPUD1-210ENST00000565966 EMID1Q96A84 441 aaPredicted RBP15.85■□□□□ 0.13
HERPUD1-210ENST00000565966 EHMT1Q9H9B1 1298 aa15.85■□□□□ 0.13
HERPUD1-210ENST00000565966 RTEL1Q9NZ71 1219 aa15.85■□□□□ 0.13
HERPUD1-210ENST00000565966 LIMCH1Q9UPQ0 1083 aa15.85■□□□□ 0.13
HERPUD1-210ENST00000565966 TRIOBPQ9H2D6 2365 aa15.85■□□□□ 0.13
HERPUD1-210ENST00000565966 KAT6AQ92794 2004 aa15.84■□□□□ 0.13
HERPUD1-210ENST00000565966 CDKL5O76039 1030 aa15.84■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms