RNA–Protein interactions for RNA: ENST00000565160.5

BBS4-208, Transcript of Bardet-Biedl syndrome 4, human

TSL 3

Gene BBS4, Length 681 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
BBS4-208	ENST00000565160	TDRD10	Q5VZ19	366 aa	Known RBP	6.11	□□□□□ -1.43
BBS4-208	ENST00000565160	SMIM5	Q71RC9	77 aa		6.11	□□□□□ -1.43
BBS4-208	ENST00000565160	VSIG10L	Q86VR7	867 aa		6.11	□□□□□ -1.43
BBS4-208	ENST00000565160		Q8N3U1	123 aa		6.11	□□□□□ -1.43
BBS4-208	ENST00000565160	PIWIL2	Q8TC59	973 aa	Known RBP	6.11	□□□□□ -1.43
BBS4-208	ENST00000565160	HRASLS5	Q96KN8	279 aa		6.11	□□□□□ -1.43
BBS4-208	ENST00000565160	HIRIP3	Q9BW71	556 aa	Predicted RBP	6.11	□□□□□ -1.43
BBS4-208	ENST00000565160	MCOLN1	Q9GZU1	580 aa		6.11	□□□□□ -1.43
BBS4-208	ENST00000565160	DUSP15	Q9H1R2	295 aa	Predicted RBP	6.11	□□□□□ -1.43
BBS4-208	ENST00000565160	ZFP64	Q9NPA5	681 aa		6.11	□□□□□ -1.43
BBS4-208	ENST00000565160	PCDHB10	Q9UN67	800 aa		6.11	□□□□□ -1.43
BBS4-208	ENST00000565160	SNX11	Q9Y5W9	270 aa		6.11	□□□□□ -1.43
BBS4-208	ENST00000565160	ITGB4	P16144	1822 aa		6.11	□□□□□ -1.43
BBS4-208	ENST00000565160	DLEC1	Q9Y238	1755 aa		6.11	□□□□□ -1.43
BBS4-208	ENST00000565160	NUP155	O75694	1391 aa		6.1	□□□□□ -1.43
BBS4-208	ENST00000565160	RPGRIP1L	Q68CZ1	1315 aa		6.1	□□□□□ -1.43
BBS4-208	ENST00000565160	WDR17	Q8IZU2	1322 aa		6.1	□□□□□ -1.43
BBS4-208	ENST00000565160	CD8B	P10966	210 aa		6.1	□□□□□ -1.43
BBS4-208	ENST00000565160	SRF	P11831	508 aa		6.1	□□□□□ -1.43
BBS4-208	ENST00000565160	KCNA3	P22001	575 aa		6.1	□□□□□ -1.43
BBS4-208	ENST00000565160	CHMP4BP1	P59074	171 aa		6.1	□□□□□ -1.43
BBS4-208	ENST00000565160	RNF4	P78317	190 aa		6.1	□□□□□ -1.43
BBS4-208	ENST00000565160	NBPF9	Q3BBW0	867 aa		6.1	□□□□□ -1.43
BBS4-208	ENST00000565160	TANGO6	Q9C0B7	1094 aa		6.1	□□□□□ -1.43
BBS4-208	ENST00000565160	ATP13A1	Q9HD20	1204 aa		6.1	□□□□□ -1.43
BBS4-208	ENST00000565160	FAM86C1	Q9NVL1	165 aa		6.1	□□□□□ -1.43
BBS4-208	ENST00000565160	PRKAG3	Q9UGI9	489 aa		6.1	□□□□□ -1.43
BBS4-208	ENST00000565160	VAV3	Q9UKW4	847 aa		6.1	□□□□□ -1.43
BBS4-208	ENST00000565160	ZNF214	Q9UL59	606 aa	Predicted RBP	6.1	□□□□□ -1.43
BBS4-208	ENST00000565160	LAMB4	A4D0S4	1761 aa		6.1	□□□□□ -1.43
BBS4-208	ENST00000565160	FER1L6	Q2WGJ9	1857 aa		6.09	□□□□□ -1.43
BBS4-208	ENST00000565160	POLR3A	O14802	1390 aa	Predicted RBP	6.09	□□□□□ -1.43
BBS4-208	ENST00000565160	SCN4A	P35499	1836 aa		6.09	□□□□□ -1.43
BBS4-208	ENST00000565160	C4A	P0C0L4	1744 aa		6.09	□□□□□ -1.43
BBS4-208	ENST00000565160	SHOX	O15266	292 aa		6.09	□□□□□ -1.43
BBS4-208	ENST00000565160	AXDND1	Q5T1B0	1012 aa	Predicted RBP	6.09	□□□□□ -1.43
BBS4-208	ENST00000565160	TMC3	Q7Z5M5	1100 aa		6.09	□□□□□ -1.43
BBS4-208	ENST00000565160	FLCN	Q8NFG4	579 aa		6.09	□□□□□ -1.43
BBS4-208	ENST00000565160	MISP3	Q96FF7	219 aa		6.09	□□□□□ -1.43
BBS4-208	ENST00000565160	GPR62	Q9BZJ7	368 aa		6.09	□□□□□ -1.43
BBS4-208	ENST00000565160	MKRN2	Q9H000	416 aa	Known RBP	6.09	□□□□□ -1.43
BBS4-208	ENST00000565160	PAK6	Q9NQU5	681 aa	Predicted RBP	6.09	□□□□□ -1.43
BBS4-208	ENST00000565160	ZSWIM5	Q9P217	1185 aa		6.09	□□□□□ -1.43
BBS4-208	ENST00000565160	KCNH3	Q9ULD8	1083 aa		6.09	□□□□□ -1.43
BBS4-208	ENST00000565160	SLC5A6	Q9Y289	635 aa		6.09	□□□□□ -1.43
BBS4-208	ENST00000565160	PPIP5K1	Q6PFW1	1433 aa		6.08	□□□□□ -1.44
BBS4-208	ENST00000565160	GC	P02774	474 aa		6.08	□□□□□ -1.44
BBS4-208	ENST00000565160	TP53	P04637	393 aa	Predicted RBP	6.08	□□□□□ -1.44
BBS4-208	ENST00000565160	DCAF15	Q66K64	600 aa		6.08	□□□□□ -1.44
BBS4-208	ENST00000565160	STK11IP	Q8N1F8	1099 aa		6.08	□□□□□ -1.44
BBS4-208	ENST00000565160	HNRNPLL	Q8WVV9	542 aa	Known RBP	6.08	□□□□□ -1.44
BBS4-208	ENST00000565160	KLHL6	Q8WZ60	621 aa		6.08	□□□□□ -1.44
BBS4-208	ENST00000565160	UBE2F	Q969M7	185 aa		6.08	□□□□□ -1.44
BBS4-208	ENST00000565160	DHRS1	Q96LJ7	313 aa		6.08	□□□□□ -1.44
BBS4-208	ENST00000565160	PRDM14	Q9GZV8	571 aa		6.08	□□□□□ -1.44
BBS4-208	ENST00000565160	MINPP1	Q9UNW1	487 aa		6.08	□□□□□ -1.44
BBS4-208	ENST00000565160	CACNA1A	O00555	2505 aa		6.08	□□□□□ -1.44
BBS4-208	ENST00000565160	RGPD2	P0DJD1	1756 aa		6.08	□□□□□ -1.44
BBS4-208	ENST00000565160	ADGRB1	O14514	1584 aa		6.07	□□□□□ -1.44
BBS4-208	ENST00000565160	EXOC5	O00471	708 aa		6.07	□□□□□ -1.44
BBS4-208	ENST00000565160	WNT11	O96014	354 aa		6.07	□□□□□ -1.44
BBS4-208	ENST00000565160	VEGFA	P15692	232 aa	Predicted RBP	6.07	□□□□□ -1.44
BBS4-208	ENST00000565160	AUH	Q13825	339 aa	Known RBP	6.07	□□□□□ -1.44
BBS4-208	ENST00000565160	GAB4	Q2WGN9	574 aa		6.07	□□□□□ -1.44
BBS4-208	ENST00000565160	THAP5	Q7Z6K1	395 aa		6.07	□□□□□ -1.44
BBS4-208	ENST00000565160	CCDC144CP	Q8IYA2	1237 aa		6.07	□□□□□ -1.44
BBS4-208	ENST00000565160	MICAL1	Q8TDZ2	1067 aa		6.07	□□□□□ -1.44
BBS4-208	ENST00000565160	ASB11	Q8WXH4	323 aa		6.07	□□□□□ -1.44
BBS4-208	ENST00000565160	ACTR10	Q9NZ32	417 aa		6.07	□□□□□ -1.44
BBS4-208	ENST00000565160	ANGEL1	Q9UNK9	670 aa	Known RBP	6.07	□□□□□ -1.44
BBS4-208	ENST00000565160	SLC12A7	Q9Y666	1083 aa		6.07	□□□□□ -1.44
BBS4-208	ENST00000565160	LTN1	O94822	1766 aa		6.07	□□□□□ -1.44
BBS4-208	ENST00000565160	KIAA0100	Q14667	2235 aa	Known RBP	6.07	□□□□□ -1.44
BBS4-208	ENST00000565160	RBBP6	Q7Z6E9	1792 aa	Known RBP	6.06	□□□□□ -1.44
BBS4-208	ENST00000565160		A0A0G2JLW4	131 aa		6.06	□□□□□ -1.44
BBS4-208	ENST00000565160	GLTPD2	A6NH11	291 aa		6.06	□□□□□ -1.44
BBS4-208	ENST00000565160	RASSF10	A6NK89	507 aa		6.06	□□□□□ -1.44
BBS4-208	ENST00000565160		B2RBV5	119 aa		6.06	□□□□□ -1.44
BBS4-208	ENST00000565160	CBFA2T2	O43439	604 aa		6.06	□□□□□ -1.44
BBS4-208	ENST00000565160	ESR1	P03372	595 aa		6.06	□□□□□ -1.44
BBS4-208	ENST00000565160	TPP2	P29144	1249 aa	Predicted RBP	6.06	□□□□□ -1.44
BBS4-208	ENST00000565160	SOX10	P56693	466 aa		6.06	□□□□□ -1.44
BBS4-208	ENST00000565160	NMI	Q13287	307 aa	Predicted RBP	6.06	□□□□□ -1.44
BBS4-208	ENST00000565160	IKZF1	Q13422	519 aa		6.06	□□□□□ -1.44
BBS4-208	ENST00000565160	GNPTAB	Q3T906	1256 aa		6.06	□□□□□ -1.44
BBS4-208	ENST00000565160	TNNI3K	Q59H18	835 aa		6.06	□□□□□ -1.44
BBS4-208	ENST00000565160	TOM1L2	Q6ZVM7	507 aa		6.06	□□□□□ -1.44
BBS4-208	ENST00000565160	ANKS3	Q6ZW76	656 aa		6.06	□□□□□ -1.44
BBS4-208	ENST00000565160	TSPYL5	Q86VY4	417 aa	Predicted RBP	6.06	□□□□□ -1.44
BBS4-208	ENST00000565160	C7orf61	Q8IZ16	206 aa		6.06	□□□□□ -1.44
BBS4-208	ENST00000565160	HDAC8	Q9BY41	377 aa		6.06	□□□□□ -1.44
BBS4-208	ENST00000565160	PHAX	Q9H814	394 aa	Known RBP	6.06	□□□□□ -1.44
BBS4-208	ENST00000565160	GFOD1	Q9NXC2	390 aa		6.06	□□□□□ -1.44
BBS4-208	ENST00000565160	RNF181	Q9P0P0	153 aa		6.06	□□□□□ -1.44
BBS4-208	ENST00000565160	AFDN	P55196	1824 aa	Known RBP	6.06	□□□□□ -1.44
BBS4-208	ENST00000565160	MYH14	Q7Z406	1995 aa	Known RBP	6.06	□□□□□ -1.44
BBS4-208	ENST00000565160	SCN11A	Q9UI33	1791 aa		6.06	□□□□□ -1.44
BBS4-208	ENST00000565160	NFAT5	O94916	1531 aa		6.05	□□□□□ -1.44
BBS4-208	ENST00000565160	KLF4	O43474	513 aa		6.05	□□□□□ -1.44
BBS4-208	ENST00000565160	PRAMEF1	O95521	474 aa		6.05	□□□□□ -1.44

Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms