RNA–Protein interactions for RNA: ENST00000564845.5

CHD9-213, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD9, Length 11,504 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-213ENST00000564845 ERMNQ8TAM6 284 aa3.72□□□□□ -1.81
CHD9-213ENST00000564845 ALS2CR12Q96Q35 445 aa3.72□□□□□ -1.81
CHD9-213ENST00000564845 SPC25Q9HBM1 224 aa3.72□□□□□ -1.81
CHD9-213ENST00000564845 SSX2IPQ9Y2D8 614 aa3.72□□□□□ -1.81
CHD9-213ENST00000564845 SCN7AQ01118 1682 aa3.72□□□□□ -1.81
CHD9-213ENST00000564845 RPS6KA4O75676 772 aa3.72□□□□□ -1.81
CHD9-213ENST00000564845 POTEIP0CG38 1075 aa3.72□□□□□ -1.81
CHD9-213ENST00000564845 COPB2P35606 906 aa3.72□□□□□ -1.81
CHD9-213ENST00000564845 PSMC6P62333 389 aa3.72□□□□□ -1.81
CHD9-213ENST00000564845 MAP3K21Q5TCX8 1036 aa3.72□□□□□ -1.81
CHD9-213ENST00000564845 SRGAP1Q7Z6B7 1085 aa3.72□□□□□ -1.81
CHD9-213ENST00000564845 GSPT2Q8IYD1 628 aaKnown RBP3.72□□□□□ -1.81
CHD9-213ENST00000564845 CRACR2AQ9BSW2 395 aa3.72□□□□□ -1.81
CHD9-213ENST00000564845 FLT1P17948 1338 aa3.72□□□□□ -1.81
CHD9-213ENST00000564845 KLRF2D3W0D1 207 aa3.72□□□□□ -1.81
CHD9-213ENST00000564845 IDEP14735 1019 aa3.72□□□□□ -1.81
CHD9-213ENST00000564845 TNNI2P48788 182 aa3.72□□□□□ -1.81
CHD9-213ENST00000564845 PPP2R3AQ06190 1150 aa3.72□□□□□ -1.81
CHD9-213ENST00000564845 DAB2IPQ5VWQ8 1189 aa3.72□□□□□ -1.81
CHD9-213ENST00000564845 CEP57L1Q8IYX8 460 aa3.72□□□□□ -1.81
CHD9-213ENST00000564845 ACP6Q9NPH0 428 aa3.72□□□□□ -1.81
CHD9-213ENST00000564845 NARFQ9UHQ1 456 aa3.72□□□□□ -1.81
CHD9-213ENST00000564845 PUF60Q9UHX1 559 aaKnown RBP3.72□□□□□ -1.81
CHD9-213ENST00000564845 NUP98P52948 1817 aa3.72□□□□□ -1.81
CHD9-213ENST00000564845 OPLAHO14841 1288 aa3.72□□□□□ -1.81
CHD9-213ENST00000564845 BUB1BO60566 1050 aaPredicted RBP3.72□□□□□ -1.81
CHD9-213ENST00000564845 RCSD1Q6JBY9 416 aa3.72□□□□□ -1.81
CHD9-213ENST00000564845 RUBCNQ92622 972 aa3.72□□□□□ -1.81
CHD9-213ENST00000564845 DTNBP1Q96EV8 351 aa3.72□□□□□ -1.81
CHD9-213ENST00000564845 TMEM47Q9BQJ4 181 aa3.72□□□□□ -1.81
CHD9-213ENST00000564845 IMPG2Q9BZV3 1241 aa3.72□□□□□ -1.81
CHD9-213ENST00000564845 DNAJC18Q9H819 358 aa3.72□□□□□ -1.81
CHD9-213ENST00000564845 TAB2Q9NYJ8 693 aa3.72□□□□□ -1.81
CHD9-213ENST00000564845 STK39Q9UEW8 545 aa3.72□□□□□ -1.81
CHD9-213ENST00000564845 PASKQ96RG2 1323 aa3.72□□□□□ -1.81
CHD9-213ENST00000564845 FRMD3A2A2Y4 597 aa3.71□□□□□ -1.81
CHD9-213ENST00000564845 MMP1P03956 469 aa3.71□□□□□ -1.81
CHD9-213ENST00000564845 HLA-DOAP06340 250 aa3.71□□□□□ -1.81
CHD9-213ENST00000564845 OLFML2BQ68BL8 750 aa3.71□□□□□ -1.81
CHD9-213ENST00000564845 ENGASEQ8NFI3 743 aa3.71□□□□□ -1.81
CHD9-213ENST00000564845 MTRQ99707 1265 aa3.71□□□□□ -1.81
CHD9-213ENST00000564845 MAD2L2Q9UI95 211 aa3.71□□□□□ -1.81
CHD9-213ENST00000564845 PACSIN2Q9UNF0 486 aaPredicted RBP3.71□□□□□ -1.81
CHD9-213ENST00000564845 MROH5Q6ZUA9 1318 aa3.71□□□□□ -1.81
CHD9-213ENST00000564845 TRIM75PA6NK02 468 aa3.71□□□□□ -1.81
CHD9-213ENST00000564845 CLIC2O15247 247 aa3.71□□□□□ -1.81
CHD9-213ENST00000564845 PPIP5K2O43314 1243 aa3.71□□□□□ -1.81
CHD9-213ENST00000564845 THAP12O43422 761 aa3.71□□□□□ -1.81
CHD9-213ENST00000564845 CFBP00751 764 aa3.71□□□□□ -1.81
CHD9-213ENST00000564845 FSTL1Q12841 308 aa3.71□□□□□ -1.81
CHD9-213ENST00000564845 KRT23Q9C075 422 aa3.71□□□□□ -1.81
CHD9-213ENST00000564845 PNPLA7Q6ZV29 1317 aa3.71□□□□□ -1.82
CHD9-213ENST00000564845 GOLGA8IPA6NC78 632 aa3.71□□□□□ -1.82
CHD9-213ENST00000564845 ECE2O60344 883 aa3.71□□□□□ -1.82
CHD9-213ENST00000564845 GAS8O95995 478 aa3.71□□□□□ -1.82
CHD9-213ENST00000564845 MATR3P43243 847 aaKnown RBP eCLIP3.71□□□□□ -1.828e-7■■■□□ 17.1
CHD9-213ENST00000564845 ERCC6LQ2NKX8 1250 aa3.71□□□□□ -1.82
CHD9-213ENST00000564845 GPATCH4Q5T3I0 446 aaKnown RBP3.71□□□□□ -1.82
CHD9-213ENST00000564845 PPP1R3FQ6ZSY5 799 aaPredicted RBP3.71□□□□□ -1.82
CHD9-213ENST00000564845 KIF18AQ8NI77 898 aa3.71□□□□□ -1.82
CHD9-213ENST00000564845 GOLGA5Q8TBA6 731 aa3.71□□□□□ -1.82
CHD9-213ENST00000564845 LMBR1Q8WVP7 490 aa3.71□□□□□ -1.82
CHD9-213ENST00000564845 MAP3K14Q99558 947 aa3.71□□□□□ -1.82
CHD9-213ENST00000564845 ALDH8A1Q9H2A2 487 aaPredicted RBP3.71□□□□□ -1.82
CHD9-213ENST00000564845 FAM8A1Q9UBU6 413 aa3.71□□□□□ -1.82
CHD9-213ENST00000564845 STX10O60499 249 aa3.71□□□□□ -1.82
CHD9-213ENST00000564845 MTM1Q13496 603 aa3.71□□□□□ -1.82
CHD9-213ENST00000564845 TAF11Q15544 211 aa3.71□□□□□ -1.82
CHD9-213ENST00000564845 SH3BP5LQ7L8J4 393 aa3.71□□□□□ -1.82
CHD9-213ENST00000564845 PCMTD1Q96MG8 357 aaPredicted RBP3.71□□□□□ -1.82
CHD9-213ENST00000564845 OLFML3Q9NRN5 406 aa3.71□□□□□ -1.82
CHD9-213ENST00000564845 RGL1Q9NZL6 768 aa3.71□□□□□ -1.82
CHD9-213ENST00000564845 TSKSQ9UJT2 592 aa3.71□□□□□ -1.82
CHD9-213ENST00000564845 USTQ9Y2C2 406 aa3.71□□□□□ -1.82
CHD9-213ENST00000564845 BICDL2A1A5D9 508 aa3.71□□□□□ -1.82
CHD9-213ENST00000564845 PSMD14O00487 310 aa3.71□□□□□ -1.82
CHD9-213ENST00000564845 IVLP07476 585 aa3.71□□□□□ -1.82
CHD9-213ENST00000564845 PLEKP08567 350 aaPredicted RBP3.71□□□□□ -1.82
CHD9-213ENST00000564845 SRGNP10124 158 aa3.71□□□□□ -1.82
CHD9-213ENST00000564845 DPEP1P16444 411 aa3.71□□□□□ -1.82
CHD9-213ENST00000564845 TBCKQ8TEA7 893 aa3.71□□□□□ -1.82
CHD9-213ENST00000564845 JDP2Q8WYK2 163 aa3.71□□□□□ -1.82
CHD9-213ENST00000564845 MKRN1Q9UHC7 482 aaKnown RBP3.71□□□□□ -1.82
CHD9-213ENST00000564845 MAD1L1Q9Y6D9 718 aa3.71□□□□□ -1.82
CHD9-213ENST00000564845 RSPH10B2B2RC85 870 aa3.71□□□□□ -1.82
CHD9-213ENST00000564845 E9PMD0 336 aa3.71□□□□□ -1.82
CHD9-213ENST00000564845 RSPH10BP0C881 870 aa3.71□□□□□ -1.82
CHD9-213ENST00000564845 ST5P78524 1137 aa3.71□□□□□ -1.82
CHD9-213ENST00000564845 CCDC6Q16204 474 aa3.71□□□□□ -1.82
CHD9-213ENST00000564845 ACRBPQ8NEB7 543 aa3.71□□□□□ -1.82
CHD9-213ENST00000564845 SUPT20HQ8NEM7 779 aa3.71□□□□□ -1.82
CHD9-213ENST00000564845 MTA3Q9BTC8 594 aa3.71□□□□□ -1.82
CHD9-213ENST00000564845 HACD3Q9P035 362 aa3.71□□□□□ -1.82
CHD9-213ENST00000564845 SBDSQ9Y3A5 250 aaKnown RBP eCLIP3.71□□□□□ -1.82
CHD9-213ENST00000564845 DDX60LQ5H9U9 1706 aaKnown RBP3.71□□□□□ -1.82
CHD9-213ENST00000564845 KRT10P13645 584 aa3.71□□□□□ -1.82
CHD9-213ENST00000564845 NAPAP54920 295 aa3.71□□□□□ -1.82
CHD9-213ENST00000564845 CCDC38Q502W7 563 aa3.71□□□□□ -1.82
CHD9-213ENST00000564845 CDC42EP5Q6NZY7 148 aa3.71□□□□□ -1.82
CHD9-213ENST00000564845 MAIP1Q8WWC4 291 aa3.71□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms