RNA–Protein interactions for RNA: ENST00000564752.1

CLN6-204, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 3 BASIC

Gene CLN6, Length 900 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-204ENST00000564752 CHST3Q7LGC8 479 aa21.48■■□□□ 1.03
CLN6-204ENST00000564752 SKAP1Q86WV1 359 aa21.48■■□□□ 1.03
CLN6-204ENST00000564752 RETREG2Q8NC44 543 aa21.48■■□□□ 1.03
CLN6-204ENST00000564752 KAT2BQ92831 832 aa21.48■■□□□ 1.03
CLN6-204ENST00000564752 PCDHA11Q9Y5I1 949 aa21.48■■□□□ 1.03
CLN6-204ENST00000564752 PCDHA1Q9Y5I3 950 aa21.48■■□□□ 1.03
CLN6-204ENST00000564752 MYH6P13533 1939 aa21.48■■□□□ 1.03
CLN6-204ENST00000564752 CHD7Q9P2D1 2997 aa21.47■■□□□ 1.03
CLN6-204ENST00000564752 ATP2A2P16615 1042 aaKnown RBP21.47■■□□□ 1.03
CLN6-204ENST00000564752 CASTP20810 708 aaKnown RBP21.47■■□□□ 1.03
CLN6-204ENST00000564752 BFSP2Q13515 415 aa21.47■■□□□ 1.03
CLN6-204ENST00000564752 ADGRE1Q14246 886 aa21.47■■□□□ 1.03
CLN6-204ENST00000564752 SLC35G1Q2M3R5 365 aa21.47■■□□□ 1.03
CLN6-204ENST00000564752 BMP2KLQ5H9B9 411 aa21.47■■□□□ 1.03
CLN6-204ENST00000564752 STOX1Q6ZVD7 989 aa21.47■■□□□ 1.03
CLN6-204ENST00000564752 SESTD1Q86VW0 696 aa21.47■■□□□ 1.03
CLN6-204ENST00000564752 SAMD3Q8N6K7 520 aa21.47■■□□□ 1.03
CLN6-204ENST00000564752 NCOA7Q8NI08 942 aa21.47■■□□□ 1.03
CLN6-204ENST00000564752 MAP4K1Q92918 833 aa21.47■■□□□ 1.03
CLN6-204ENST00000564752 EMID1Q96A84 441 aaPredicted RBP21.47■■□□□ 1.03
CLN6-204ENST00000564752 RBM8AQ9Y5S9 174 aaKnown RBP21.47■■□□□ 1.03
CLN6-204ENST00000564752 E7EWF7 191 aa21.46■■□□□ 1.03
CLN6-204ENST00000564752 IFIT3O14879 490 aaKnown RBP21.46■■□□□ 1.03
CLN6-204ENST00000564752 CHMP4BP1P59074 171 aa21.46■■□□□ 1.03
CLN6-204ENST00000564752 GRM4Q14833 912 aa21.46■■□□□ 1.03
CLN6-204ENST00000564752 PTGISQ16647 500 aa21.46■■□□□ 1.03
CLN6-204ENST00000564752 DGKDQ16760 1214 aa21.46■■□□□ 1.03
CLN6-204ENST00000564752 CCDC136Q96JN2 1154 aa21.46■■□□□ 1.03
CLN6-204ENST00000564752 CTAGE1Q96RT6 745 aa21.46■■□□□ 1.03
CLN6-204ENST00000564752 ESYT1Q9BSJ8 1104 aa21.46■■□□□ 1.03
CLN6-204ENST00000564752 RIOX1Q9H6W3 641 aa21.46■■□□□ 1.03
CLN6-204ENST00000564752 NOD1Q9Y239 953 aa21.46■■□□□ 1.03
CLN6-204ENST00000564752 TAF6LQ9Y6J9 622 aa21.46■■□□□ 1.03
CLN6-204ENST00000564752 ERICH2A1L162 156 aa21.45■■□□□ 1.02
CLN6-204ENST00000564752 RGS20O76081 388 aa21.45■■□□□ 1.02
CLN6-204ENST00000564752 ACTN1P12814 892 aa21.45■■□□□ 1.02
CLN6-204ENST00000564752 MYOGP15173 224 aa21.45■■□□□ 1.02
CLN6-204ENST00000564752 LAMC2Q13753 1193 aa21.45■■□□□ 1.02
CLN6-204ENST00000564752 SYMPKQ92797 1274 aaKnown RBP21.45■■□□□ 1.02
CLN6-204ENST00000564752 PDCD2LQ9BRP1 358 aa21.45■■□□□ 1.02
CLN6-204ENST00000564752 SENP2Q9HC62 589 aa21.45■■□□□ 1.02
CLN6-204ENST00000564752 MRVI1Q9Y6F6 885 aa21.45■■□□□ 1.02
CLN6-204ENST00000564752 GBF1Q92538 1859 aa21.44■■□□□ 1.02
CLN6-204ENST00000564752 TROAPQ12815 778 aa21.44■■□□□ 1.02
CLN6-204ENST00000564752 TRAF1Q13077 416 aa21.44■■□□□ 1.02
CLN6-204ENST00000564752 SART3Q15020 963 aaKnown RBP21.44■■□□□ 1.02
CLN6-204ENST00000564752 GDF6Q6KF10 455 aaPredicted RBP21.44■■□□□ 1.02
CLN6-204ENST00000564752 VSIG10LQ86VR7 867 aa21.44■■□□□ 1.02
CLN6-204ENST00000564752 PPTC7Q8NI37 304 aa21.44■■□□□ 1.02
CLN6-204ENST00000564752 PIGSQ96S52 555 aa21.44■■□□□ 1.02
CLN6-204ENST00000564752 MYO9BQ13459 2157 aa21.44■■□□□ 1.02
CLN6-204ENST00000564752 TTC28Q96AY4 2481 aa21.44■■□□□ 1.02
CLN6-204ENST00000564752 MYCLP12524 364 aaPredicted RBP21.43■■□□□ 1.02
CLN6-204ENST00000564752 HOXA13P31271 388 aaPredicted RBP21.43■■□□□ 1.02
CLN6-204ENST00000564752 WTAPQ15007 396 aa21.43■■□□□ 1.02
CLN6-204ENST00000564752 PPP2R2DQ66LE6 453 aa21.43■■□□□ 1.02
CLN6-204ENST00000564752 HOMER1Q86YM7 354 aa21.43■■□□□ 1.02
CLN6-204ENST00000564752 DHX37Q8IY37 1157 aaKnown RBP21.43■■□□□ 1.02
CLN6-204ENST00000564752 CCDC155Q8N6L0 562 aa21.43■■□□□ 1.02
CLN6-204ENST00000564752 CAGE1Q8TC20 777 aa21.43■■□□□ 1.02
CLN6-204ENST00000564752 PHOSPHO2Q8TCD6 241 aa21.43■■□□□ 1.02
CLN6-204ENST00000564752 PPM1EQ8WY54 764 aa21.43■■□□□ 1.02
CLN6-204ENST00000564752 FTOQ9C0B1 505 aaKnown RBP eCLIP21.43■■□□□ 1.02
CLN6-204ENST00000564752 LSG1Q9H089 658 aaKnown RBP21.43■■□□□ 1.02
CLN6-204ENST00000564752 ANO2Q9NQ90 1003 aa21.43■■□□□ 1.02
CLN6-204ENST00000564752 PRDM6Q9NQX0 595 aa21.43■■□□□ 1.02
CLN6-204ENST00000564752 GTF2IRD1Q9UHL9 959 aa21.43■■□□□ 1.02
CLN6-204ENST00000564752 PNMA6FA0A0J9YX94 578 aa21.42■■□□□ 1.02
CLN6-204ENST00000564752 CYTH3O43739 400 aa21.42■■□□□ 1.02
CLN6-204ENST00000564752 NEFLP07196 543 aa21.42■■□□□ 1.02
CLN6-204ENST00000564752 IGFBP4P22692 258 aa21.42■■□□□ 1.02
CLN6-204ENST00000564752 PSEN2P49810 448 aa21.42■■□□□ 1.02
CLN6-204ENST00000564752 PGM5Q15124 567 aa21.42■■□□□ 1.02
CLN6-204ENST00000564752 TMEM67Q5HYA8 995 aa21.42■■□□□ 1.02
CLN6-204ENST00000564752 KCNV1Q6PIU1 500 aa21.42■■□□□ 1.02
CLN6-204ENST00000564752 AFAP1L1Q8TED9 768 aa21.42■■□□□ 1.02
CLN6-204ENST00000564752 HDAC6Q9UBN7 1215 aa21.42■■□□□ 1.02
CLN6-204ENST00000564752 GCOM1H8Y6P7 765 aaPredicted RBP21.41■■□□□ 1.02
CLN6-204ENST00000564752 HAS3O00219 553 aa21.41■■□□□ 1.02
CLN6-204ENST00000564752 POLR2MP0CAP2 368 aa21.41■■□□□ 1.02
CLN6-204ENST00000564752 HOXD8P13378 290 aaPredicted RBP21.41■■□□□ 1.02
CLN6-204ENST00000564752 GPNMBQ14956 572 aa21.41■■□□□ 1.02
CLN6-204ENST00000564752 MYSM1Q5VVJ2 828 aa21.41■■□□□ 1.02
CLN6-204ENST00000564752 CASC1Q6TDU7 716 aa21.41■■□□□ 1.02
CLN6-204ENST00000564752 C7orf31Q8N865 590 aa21.41■■□□□ 1.02
CLN6-204ENST00000564752 IGDCC4Q8TDY8 1250 aa21.41■■□□□ 1.02
CLN6-204ENST00000564752 DHX38Q92620 1227 aaKnown RBP21.41■■□□□ 1.02
CLN6-204ENST00000564752 SLC9A7Q96T83 725 aa21.41■■□□□ 1.02
CLN6-204ENST00000564752 KATNAL1Q9BW62 490 aa21.41■■□□□ 1.02
CLN6-204ENST00000564752 PPFIA4O75335 1185 aa21.4■■□□□ 1.02
CLN6-204ENST00000564752 F2P00734 622 aa21.4■■□□□ 1.02
CLN6-204ENST00000564752 TGFB3P10600 412 aa21.4■■□□□ 1.02
CLN6-204ENST00000564752 SELPP16109 830 aa21.4■■□□□ 1.02
CLN6-204ENST00000564752 ANTXR2P58335 489 aa21.4■■□□□ 1.02
CLN6-204ENST00000564752 RBL2Q08999 1139 aa21.4■■□□□ 1.02
CLN6-204ENST00000564752 MFSD10Q14728 455 aa21.4■■□□□ 1.02
CLN6-204ENST00000564752 TJAP1Q5JTD0 557 aa21.4■■□□□ 1.02
CLN6-204ENST00000564752 CELF3Q5SZQ8 465 aaKnown RBP21.4■■□□□ 1.02
CLN6-204ENST00000564752 MB21D2Q8IYB1 491 aaPredicted RBP21.4■■□□□ 1.02
CLN6-204ENST00000564752 IL31RAQ8NI17 732 aa21.4■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms