RNA–Protein interactions for RNA: ENST00000564676.5

CDH1-206, Transcript of cadherin 1, humanhuman

TSL 1 (best)

Gene CDH1, Length 969 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-206ENST00000564676 CCND2P30279 289 aa11.43□□□□□ -0.58
CDH1-206ENST00000564676 EVCP57679 992 aa11.43□□□□□ -0.58
CDH1-206ENST00000564676 RTP1P59025 263 aa11.43□□□□□ -0.58
CDH1-206ENST00000564676 PGM5Q15124 567 aa11.43□□□□□ -0.58
CDH1-206ENST00000564676 BRDTQ58F21 947 aaPredicted RBP11.43□□□□□ -0.58
CDH1-206ENST00000564676 WWC2Q6AWC2 1192 aa11.43□□□□□ -0.58
CDH1-206ENST00000564676 CCSAPQ6IQ19 270 aaPredicted RBP11.43□□□□□ -0.58
CDH1-206ENST00000564676 COPS5Q92905 334 aa11.43□□□□□ -0.58
CDH1-206ENST00000564676 RBM27Q9P2N5 1060 aaKnown RBP11.43□□□□□ -0.58
CDH1-206ENST00000564676 ZMYND8Q9ULU4 1186 aaPredicted RBP11.43□□□□□ -0.58
CDH1-206ENST00000564676 ATP11BQ9Y2G3 1177 aa11.43□□□□□ -0.58
CDH1-206ENST00000564676 LRRC37A2A6NM11 1700 aa11.43□□□□□ -0.58
CDH1-206ENST00000564676 TNRC18O15417 2968 aaPredicted RBP11.43□□□□□ -0.58
CDH1-206ENST00000564676 ALPK3Q96L96 1907 aa11.43□□□□□ -0.58
CDH1-206ENST00000564676 hCG_1984214I3L0E3 225 aa11.42□□□□□ -0.58
CDH1-206ENST00000564676 MEIS2O14770 477 aa11.42□□□□□ -0.58
CDH1-206ENST00000564676 CPLX1O14810 134 aa11.42□□□□□ -0.58
CDH1-206ENST00000564676 CTAGE5O15320 804 aa11.42□□□□□ -0.58
CDH1-206ENST00000564676 PRPF3O43395 683 aaKnown RBP11.42□□□□□ -0.58
CDH1-206ENST00000564676 NKX3-2P78367 333 aa11.42□□□□□ -0.58
CDH1-206ENST00000564676 STK3Q13188 491 aa11.42□□□□□ -0.58
CDH1-206ENST00000564676 UBE2SQ16763 222 aa11.42□□□□□ -0.58
CDH1-206ENST00000564676 PFKFB3Q16875 520 aaPredicted RBP11.42□□□□□ -0.58
CDH1-206ENST00000564676 TRIM60Q495X7 471 aa11.42□□□□□ -0.58
CDH1-206ENST00000564676 C8orf34Q49A92 452 aa11.42□□□□□ -0.58
CDH1-206ENST00000564676 CPLX2Q6PUV4 134 aaKnown RBP11.42□□□□□ -0.58
CDH1-206ENST00000564676 VSIG10LQ86VR7 867 aa11.42□□□□□ -0.58
CDH1-206ENST00000564676 ZNF713Q8N859 430 aaPredicted RBP11.42□□□□□ -0.58
CDH1-206ENST00000564676 IL31RAQ8NI17 732 aa11.42□□□□□ -0.58
CDH1-206ENST00000564676 PHKBQ93100 1093 aa11.42□□□□□ -0.58
CDH1-206ENST00000564676 ZNF274Q96GC6 653 aaPredicted RBP11.42□□□□□ -0.58
CDH1-206ENST00000564676 ZFP91Q96JP5 570 aaPredicted RBP11.42□□□□□ -0.58
CDH1-206ENST00000564676 SLC26A6Q9BXS9 759 aa11.42□□□□□ -0.58
CDH1-206ENST00000564676 NCOA5Q9HCD5 579 aaKnown RBP11.42□□□□□ -0.58
CDH1-206ENST00000564676 MRVI1Q9Y6F6 885 aa11.42□□□□□ -0.58
CDH1-206ENST00000564676 NID2Q14112 1375 aa11.41□□□□□ -0.58
CDH1-206ENST00000564676 ELP1O95163 1332 aa11.41□□□□□ -0.58
CDH1-206ENST00000564676 CEP290O15078 2479 aa11.41□□□□□ -0.58
CDH1-206ENST00000564676 SMCO2A6NFE2 343 aa11.41□□□□□ -0.58
CDH1-206ENST00000564676 SPDYE3A6NKU9 549 aa11.41□□□□□ -0.58
CDH1-206ENST00000564676 STXBP3O00186 592 aa11.41□□□□□ -0.58
CDH1-206ENST00000564676 PPFIA3O75145 1194 aa11.41□□□□□ -0.58
CDH1-206ENST00000564676 CABYRO75952 493 aa11.41□□□□□ -0.58
CDH1-206ENST00000564676 ARIH2O95376 493 aa11.41□□□□□ -0.58
CDH1-206ENST00000564676 SCG2P13521 617 aa11.41□□□□□ -0.58
CDH1-206ENST00000564676 IFNAR1P17181 557 aa11.41□□□□□ -0.58
CDH1-206ENST00000564676 SYN1P17600 705 aa11.41□□□□□ -0.58
CDH1-206ENST00000564676 CPT1AP50416 773 aa11.41□□□□□ -0.58
CDH1-206ENST00000564676 ADCY7P51828 1080 aa11.41□□□□□ -0.58
CDH1-206ENST00000564676 SNX17Q15036 470 aa11.41□□□□□ -0.58
CDH1-206ENST00000564676 ANKRD1Q15327 319 aa11.41□□□□□ -0.58
CDH1-206ENST00000564676 LY6KQ17RY6 165 aa11.41□□□□□ -0.58
CDH1-206ENST00000564676 TYW1BQ6NUM6 668 aa11.41□□□□□ -0.58
CDH1-206ENST00000564676 PPP1R18Q6NYC8 613 aa11.41□□□□□ -0.58
CDH1-206ENST00000564676 CCDC62Q6P9F0 684 aa11.41□□□□□ -0.58
CDH1-206ENST00000564676 CXCL17Q6UXB2 119 aa11.41□□□□□ -0.58
CDH1-206ENST00000564676 TRIM22Q8IYM9 498 aa11.41□□□□□ -0.58
CDH1-206ENST00000564676 RNF26Q9BY78 433 aaPredicted RBP11.41□□□□□ -0.58
CDH1-206ENST00000564676 GLT8D2Q9H1C3 349 aa11.41□□□□□ -0.58
CDH1-206ENST00000564676 SLKQ9H2G2 1235 aaPredicted RBP11.41□□□□□ -0.58
CDH1-206ENST00000564676 EHMT1Q9H9B1 1298 aa11.41□□□□□ -0.58
CDH1-206ENST00000564676 RIC8AQ9NPQ8 531 aa11.41□□□□□ -0.58
CDH1-206ENST00000564676 BARHL2Q9NY43 387 aa11.41□□□□□ -0.58
CDH1-206ENST00000564676 RTEL1Q9NZ71 1219 aa11.41□□□□□ -0.58
CDH1-206ENST00000564676 PRKAG2Q9UGJ0 569 aa11.41□□□□□ -0.58
CDH1-206ENST00000564676 DDX41Q9UJV9 622 aaKnown RBP11.41□□□□□ -0.58
CDH1-206ENST00000564676 KIAA1217Q5T5P2 1943 aa11.41□□□□□ -0.58
CDH1-206ENST00000564676 A0A0U1RQG5 324 aaPredicted RBP11.4□□□□□ -0.58
CDH1-206ENST00000564676 PQBP1O60828 265 aaKnown RBP11.4□□□□□ -0.58
CDH1-206ENST00000564676 GH1P01241 217 aa11.4□□□□□ -0.58
CDH1-206ENST00000564676 MYL3P08590 195 aa11.4□□□□□ -0.58
CDH1-206ENST00000564676 NEK4P51957 841 aa11.4□□□□□ -0.58
CDH1-206ENST00000564676 AK2P54819 239 aa11.4□□□□□ -0.58
CDH1-206ENST00000564676 TLE2Q04725 743 aa11.4□□□□□ -0.58
CDH1-206ENST00000564676 SSRP1Q08945 709 aaKnown RBP11.4□□□□□ -0.58
CDH1-206ENST00000564676 NTRK3Q16288 839 aa11.4□□□□□ -0.58
CDH1-206ENST00000564676 GNPTABQ3T906 1256 aa11.4□□□□□ -0.58
CDH1-206ENST00000564676 C1orf53Q5VUE5 145 aa11.4□□□□□ -0.58
CDH1-206ENST00000564676 KCNV1Q6PIU1 500 aa11.4□□□□□ -0.58
CDH1-206ENST00000564676 CCDC12Q8WUD4 166 aaPredicted RBP11.4□□□□□ -0.58
CDH1-206ENST00000564676 IL17RAQ96F46 866 aa11.4□□□□□ -0.58
CDH1-206ENST00000564676 ALDH8A1Q9H2A2 487 aaPredicted RBP11.4□□□□□ -0.58
CDH1-206ENST00000564676 PRDM5Q9NQX1 630 aaPredicted RBP11.4□□□□□ -0.58
CDH1-206ENST00000564676 POLR3EQ9NVU0 708 aa11.4□□□□□ -0.58
CDH1-206ENST00000564676 TPCN1Q9ULQ1 816 aa11.4□□□□□ -0.58
CDH1-206ENST00000564676 PCDHA6Q9UN73 950 aa11.4□□□□□ -0.58
CDH1-206ENST00000564676 PCDHA8Q9Y5H6 950 aa11.4□□□□□ -0.58
CDH1-206ENST00000564676 FRMPD4Q14CM0 1322 aa11.39□□□□□ -0.59
CDH1-206ENST00000564676 DCDC2CA8MYV0 355 aa11.39□□□□□ -0.59
CDH1-206ENST00000564676 ARVCFO00192 962 aa11.39□□□□□ -0.59
CDH1-206ENST00000564676 KPNA6O60684 536 aa11.39□□□□□ -0.59
CDH1-206ENST00000564676 STAM2O75886 525 aa11.39□□□□□ -0.59
CDH1-206ENST00000564676 RGS20O76081 388 aa11.39□□□□□ -0.59
CDH1-206ENST00000564676 TGFB3P10600 412 aa11.39□□□□□ -0.59
CDH1-206ENST00000564676 MRPS9P82933 396 aaKnown RBP11.39□□□□□ -0.59
CDH1-206ENST00000564676 LAMC2Q13753 1193 aa11.39□□□□□ -0.59
CDH1-206ENST00000564676 PKN1Q16512 942 aa11.39□□□□□ -0.59
CDH1-206ENST00000564676 PCNX4Q63HM2 1172 aa11.39□□□□□ -0.59
CDH1-206ENST00000564676 XRRA1Q6P2D8 792 aa11.39□□□□□ -0.59
CDH1-206ENST00000564676 NLRX1Q86UT6 975 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms