RNA–Protein interactions for RNA: ENST00000564638.1

MAP1LC3B-205, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

TSL 2

Gene MAP1LC3B, Length 735 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-205ENST00000564638 GPATCH4Q5T3I0 446 aaKnown RBP8.4□□□□□ -1.06
MAP1LC3B-205ENST00000564638 TYW1BQ6NUM6 668 aa8.4□□□□□ -1.06
MAP1LC3B-205ENST00000564638 RASGRP2Q7LDG7 609 aa8.4□□□□□ -1.06
MAP1LC3B-205ENST00000564638 HOMER1Q86YM7 354 aa8.4□□□□□ -1.06
MAP1LC3B-205ENST00000564638 PDILTQ8N807 584 aa8.4□□□□□ -1.06
MAP1LC3B-205ENST00000564638 SLC17A8Q8NDX2 589 aa8.4□□□□□ -1.06
MAP1LC3B-205ENST00000564638 SYMPKQ92797 1274 aaKnown RBP8.4□□□□□ -1.06
MAP1LC3B-205ENST00000564638 DHX58Q96C10 678 aa8.4□□□□□ -1.06
MAP1LC3B-205ENST00000564638 ERO1AQ96HE7 468 aa8.4□□□□□ -1.06
MAP1LC3B-205ENST00000564638 PIGSQ96S52 555 aa8.4□□□□□ -1.06
MAP1LC3B-205ENST00000564638 ZMYND12Q9H0C1 365 aa8.4□□□□□ -1.06
MAP1LC3B-205ENST00000564638 RIOX1Q9H6W3 641 aa8.4□□□□□ -1.06
MAP1LC3B-205ENST00000564638 FBXO28Q9NVF7 368 aa8.4□□□□□ -1.06
MAP1LC3B-205ENST00000564638 PCDHA6Q9UN73 950 aa8.4□□□□□ -1.06
MAP1LC3B-205ENST00000564638 CTDP1Q9Y5B0 961 aaPredicted RBP8.4□□□□□ -1.06
MAP1LC3B-205ENST00000564638 PCDHA8Q9Y5H6 950 aa8.4□□□□□ -1.06
MAP1LC3B-205ENST00000564638 PCDHA5Q9Y5H7 936 aa8.4□□□□□ -1.06
MAP1LC3B-205ENST00000564638 COL11A1P12107 1806 aaPredicted RBP8.4□□□□□ -1.07
MAP1LC3B-205ENST00000564638 KIAA0100Q14667 2235 aaKnown RBP8.39□□□□□ -1.07
MAP1LC3B-205ENST00000564638 RLFQ13129 1914 aa8.39□□□□□ -1.07
MAP1LC3B-205ENST00000564638 SPDYE16A6NNV3 312 aaPredicted RBP8.39□□□□□ -1.07
MAP1LC3B-205ENST00000564638 TMEM232C9JQI7 657 aa8.39□□□□□ -1.07
MAP1LC3B-205ENST00000564638 M0R2N6 131 aa8.39□□□□□ -1.07
MAP1LC3B-205ENST00000564638 WNT7AO00755 349 aa8.39□□□□□ -1.07
MAP1LC3B-205ENST00000564638 SLFN14P0C7P3 912 aa8.39□□□□□ -1.07
MAP1LC3B-205ENST00000564638 BCRP11274 1271 aa8.39□□□□□ -1.07
MAP1LC3B-205ENST00000564638 BMP3P12645 472 aa8.39□□□□□ -1.07
MAP1LC3B-205ENST00000564638 LONP1P36776 959 aaKnown RBP8.39□□□□□ -1.07
MAP1LC3B-205ENST00000564638 SLC1A4P43007 532 aa8.39□□□□□ -1.07
MAP1LC3B-205ENST00000564638 GCLCP48506 637 aaPredicted RBP8.39□□□□□ -1.07
MAP1LC3B-205ENST00000564638 ADCY7P51828 1080 aa8.39□□□□□ -1.07
MAP1LC3B-205ENST00000564638 MYL5Q02045 173 aa8.39□□□□□ -1.07
MAP1LC3B-205ENST00000564638 ZNF543Q08ER8 600 aa8.39□□□□□ -1.07
MAP1LC3B-205ENST00000564638 DHX8Q14562 1220 aaKnown RBP8.39□□□□□ -1.07
MAP1LC3B-205ENST00000564638 PLS1Q14651 629 aa8.39□□□□□ -1.07
MAP1LC3B-205ENST00000564638 COG2Q14746 738 aa8.39□□□□□ -1.07
MAP1LC3B-205ENST00000564638 INF2Q27J81 1249 aa8.39□□□□□ -1.07
MAP1LC3B-205ENST00000564638 WDR78Q5VTH9 848 aa8.39□□□□□ -1.07
MAP1LC3B-205ENST00000564638 C17orf99Q6UX52 265 aa8.39□□□□□ -1.07
MAP1LC3B-205ENST00000564638 KCTD1Q719H9 257 aa8.39□□□□□ -1.07
MAP1LC3B-205ENST00000564638 REXO1Q8N1G1 1221 aaKnown RBP8.39□□□□□ -1.07
MAP1LC3B-205ENST00000564638 GMCL1P1Q8NEA9 526 aa8.39□□□□□ -1.07
MAP1LC3B-205ENST00000564638 RASGRP4Q8TDF6 673 aa8.39□□□□□ -1.07
MAP1LC3B-205ENST00000564638 GTF3C2Q8WUA4 911 aaPredicted RBP8.39□□□□□ -1.07
MAP1LC3B-205ENST00000564638 DCAF4Q8WV16 495 aa8.39□□□□□ -1.07
MAP1LC3B-205ENST00000564638 MKL1Q969V6 931 aa8.39□□□□□ -1.07
MAP1LC3B-205ENST00000564638 KIFC2Q96AC6 838 aa8.39□□□□□ -1.07
MAP1LC3B-205ENST00000564638 ATG4CQ96DT6 458 aa8.39□□□□□ -1.07
MAP1LC3B-205ENST00000564638 ARHGAP39Q9C0H5 1083 aa8.39□□□□□ -1.07
MAP1LC3B-205ENST00000564638 TTC12Q9H892 705 aaPredicted RBP8.39□□□□□ -1.07
MAP1LC3B-205ENST00000564638 VAT1LQ9HCJ6 419 aa8.39□□□□□ -1.07
MAP1LC3B-205ENST00000564638 GPCPD1Q9NPB8 672 aa8.39□□□□□ -1.07
MAP1LC3B-205ENST00000564638 MAN1B1Q9UKM7 699 aa8.39□□□□□ -1.07
MAP1LC3B-205ENST00000564638 SMCO2A6NFE2 343 aa8.38□□□□□ -1.07
MAP1LC3B-205ENST00000564638 CBFA2T2O43439 604 aa8.38□□□□□ -1.07
MAP1LC3B-205ENST00000564638 NEMFO60524 1076 aa8.38□□□□□ -1.07
MAP1LC3B-205ENST00000564638 PRR29P0C7W0 189 aa8.38□□□□□ -1.07
MAP1LC3B-205ENST00000564638 PTGS1P23219 599 aa8.38□□□□□ -1.07
MAP1LC3B-205ENST00000564638 PRPHP41219 470 aa8.38□□□□□ -1.07
MAP1LC3B-205ENST00000564638 PSMC4P43686 418 aa8.38□□□□□ -1.07
MAP1LC3B-205ENST00000564638 ERVK-9P63128 1117 aa8.38□□□□□ -1.07
MAP1LC3B-205ENST00000564638 ERVK-24P63145 666 aa8.38□□□□□ -1.07
MAP1LC3B-205ENST00000564638 LACTBP83111 547 aaPredicted RBP8.38□□□□□ -1.07
MAP1LC3B-205ENST00000564638 MDM2Q00987 491 aaPredicted RBP8.38□□□□□ -1.07
MAP1LC3B-205ENST00000564638 FAM110CQ1W6H9 321 aa8.38□□□□□ -1.07
MAP1LC3B-205ENST00000564638 NT5DC1Q5TFE4 455 aa8.38□□□□□ -1.07
MAP1LC3B-205ENST00000564638 USP49Q70CQ1 688 aa8.38□□□□□ -1.07
MAP1LC3B-205ENST00000564638 NEK8Q86SG6 692 aa8.38□□□□□ -1.07
MAP1LC3B-205ENST00000564638 IQUBQ8NA54 791 aa8.38□□□□□ -1.07
MAP1LC3B-205ENST00000564638 MLKLQ8NB16 471 aa8.38□□□□□ -1.07
MAP1LC3B-205ENST00000564638 EPSTI1Q96J88 318 aa8.38□□□□□ -1.07
MAP1LC3B-205ENST00000564638 SLF1Q9BQI6 1058 aa8.38□□□□□ -1.07
MAP1LC3B-205ENST00000564638 UBA5Q9GZZ9 404 aa8.38□□□□□ -1.07
MAP1LC3B-205ENST00000564638 CPVLQ9H3G5 476 aa8.38□□□□□ -1.07
MAP1LC3B-205ENST00000564638 EFCC1Q9HA90 598 aa8.38□□□□□ -1.07
MAP1LC3B-205ENST00000564638 TXNRD2Q9NNW7 524 aa8.38□□□□□ -1.07
MAP1LC3B-205ENST00000564638 HOXC10Q9NYD6 342 aa8.38□□□□□ -1.07
MAP1LC3B-205ENST00000564638 PPP1R9AQ9ULJ8 1098 aa8.38□□□□□ -1.07
MAP1LC3B-205ENST00000564638 SYNPO2Q9UMS6 1093 aa8.38□□□□□ -1.07
MAP1LC3B-205ENST00000564638 TRIM17Q9Y577 477 aa8.38□□□□□ -1.07
MAP1LC3B-205ENST00000564638 MYH7BA7E2Y1 1941 aa8.38□□□□□ -1.07
MAP1LC3B-205ENST00000564638 A0A087X0B3 334 aa8.37□□□□□ -1.07
MAP1LC3B-205ENST00000564638 PNMA6FA0A0J9YX94 578 aa8.37□□□□□ -1.07
MAP1LC3B-205ENST00000564638 GTPBP6O43824 516 aaPredicted RBP8.37□□□□□ -1.07
MAP1LC3B-205ENST00000564638 OFD1O75665 1012 aa8.37□□□□□ -1.07
MAP1LC3B-205ENST00000564638 OR52Z1P0C646 297 aa8.37□□□□□ -1.07
MAP1LC3B-205ENST00000564638 STAT6P42226 847 aa8.37□□□□□ -1.07
MAP1LC3B-205ENST00000564638 SARSP49591 514 aaKnown RBP8.37□□□□□ -1.07
MAP1LC3B-205ENST00000564638 STAT2P52630 851 aa8.37□□□□□ -1.07
MAP1LC3B-205ENST00000564638 FCGRTP55899 365 aa8.37□□□□□ -1.07
MAP1LC3B-205ENST00000564638 GSDMDP57764 484 aa8.37□□□□□ -1.07
MAP1LC3B-205ENST00000564638 MORC3Q14149 939 aa8.37□□□□□ -1.07
MAP1LC3B-205ENST00000564638 ARHGEF6Q15052 776 aa8.37□□□□□ -1.07
MAP1LC3B-205ENST00000564638 CT47A1Q5JQC4 288 aaPredicted RBP8.37□□□□□ -1.07
MAP1LC3B-205ENST00000564638 ISM2Q6H9L7 571 aa8.37□□□□□ -1.07
MAP1LC3B-205ENST00000564638 TTBK2Q6IQ55 1244 aa8.37□□□□□ -1.07
MAP1LC3B-205ENST00000564638 DTHD1Q6ZMT9 781 aa8.37□□□□□ -1.07
MAP1LC3B-205ENST00000564638 CCDC186Q7Z3E2 898 aa8.37□□□□□ -1.07
MAP1LC3B-205ENST00000564638 SH3RF1Q7Z6J0 888 aa8.37□□□□□ -1.07
MAP1LC3B-205ENST00000564638 FAM160B2Q86V87 743 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms