RNA–Protein interactions for RNA: ENST00000564068.1

COMMD4-209, Transcript of COMM domain containing 4, humanhuman

Gene COMMD4, Length 4,204 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-209ENST00000564068 NRXN1Q9ULB1 1477 aa13.8□□□□□ -0.2
COMMD4-209ENST00000564068 PIK3C2BO00750 1634 aa13.8□□□□□ -0.2
COMMD4-209ENST00000564068 DDAH1O94760 285 aa13.8□□□□□ -0.2
COMMD4-209ENST00000564068 SUN1O94901 812 aa13.8□□□□□ -0.2
COMMD4-209ENST00000564068 RFC4P35249 363 aa13.8□□□□□ -0.2
COMMD4-209ENST00000564068 ADCY7P51828 1080 aa13.8□□□□□ -0.2
COMMD4-209ENST00000564068 TNIP1Q15025 636 aa13.8□□□□□ -0.2
COMMD4-209ENST00000564068 CAPN12Q6ZSI9 719 aa13.8□□□□□ -0.2
COMMD4-209ENST00000564068 SLF2Q8IX21 1173 aa13.8□□□□□ -0.2
COMMD4-209ENST00000564068 LARP4BQ92615 738 aaKnown RBP13.8□□□□□ -0.2
COMMD4-209ENST00000564068 THOC1Q96FV9 657 aaKnown RBP13.8□□□□□ -0.2
COMMD4-209ENST00000564068 ATP6V1G3Q96LB4 118 aa13.8□□□□□ -0.2
COMMD4-209ENST00000564068 DDX47Q9H0S4 455 aaKnown RBP13.8□□□□□ -0.2
COMMD4-209ENST00000564068 CD248Q9HCU0 757 aa13.8□□□□□ -0.2
COMMD4-209ENST00000564068 LIMA1Q9UHB6 759 aaKnown RBP13.8□□□□□ -0.2
COMMD4-209ENST00000564068 CAPN11Q9UMQ6 739 aa13.8□□□□□ -0.2
COMMD4-209ENST00000564068 LSP1P33241 339 aa13.8□□□□□ -0.2
COMMD4-209ENST00000564068 EHD4Q9H223 541 aa13.8□□□□□ -0.2
COMMD4-209ENST00000564068 PCDHA12Q9UN75 941 aa13.8□□□□□ -0.2
COMMD4-209ENST00000564068 HPSEQ9Y251 543 aa13.8□□□□□ -0.2
COMMD4-209ENST00000564068 ADGRL3Q9HAR2 1447 aa13.79□□□□□ -0.2
COMMD4-209ENST00000564068 CD44P16070 742 aaKnown RBP13.79□□□□□ -0.2
COMMD4-209ENST00000564068 EXOC3L4Q17RC7 722 aa13.79□□□□□ -0.2
COMMD4-209ENST00000564068 MUM1Q2TAK8 710 aa13.79□□□□□ -0.2
COMMD4-209ENST00000564068 SGMS1Q86VZ5 419 aa13.79□□□□□ -0.2
COMMD4-209ENST00000564068 VPS52Q8N1B4 723 aa13.79□□□□□ -0.2
COMMD4-209ENST00000564068 HVCN1Q96D96 273 aa13.79□□□□□ -0.2
COMMD4-209ENST00000564068 KANSL2Q9H9L4 492 aa13.79□□□□□ -0.2
COMMD4-209ENST00000564068 DMGDHQ9UI17 866 aaKnown RBP13.79□□□□□ -0.2
COMMD4-209ENST00000564068 PCDHA4Q9UN74 947 aa13.79□□□□□ -0.2
COMMD4-209ENST00000564068 CYP27B1O15528 508 aa13.79□□□□□ -0.2
COMMD4-209ENST00000564068 CARSP49589 748 aaKnown RBP13.79□□□□□ -0.2
COMMD4-209ENST00000564068 PARP9Q8IXQ6 854 aa13.79□□□□□ -0.2
COMMD4-209ENST00000564068 IGDCC4Q8TDY8 1250 aa13.79□□□□□ -0.2
COMMD4-209ENST00000564068 ZNF473Q8WTR7 871 aaKnown RBP13.79□□□□□ -0.2
COMMD4-209ENST00000564068 ARL8AQ96BM9 186 aa13.79□□□□□ -0.2
COMMD4-209ENST00000564068 FMO2Q99518 471 aa13.79□□□□□ -0.2
COMMD4-209ENST00000564068 STK36Q9NRP7 1315 aa13.79□□□□□ -0.2
COMMD4-209ENST00000564068 MYO3AQ8NEV4 1616 aa13.79□□□□□ -0.2
COMMD4-209ENST00000564068 ABCC12Q96J65 1359 aa13.79□□□□□ -0.2
COMMD4-209ENST00000564068 ERVV-2B6SEH9 535 aa13.79□□□□□ -0.2
COMMD4-209ENST00000564068 SMIM24O75264 130 aa13.79□□□□□ -0.2
COMMD4-209ENST00000564068 SLC20A2Q08357 652 aa13.79□□□□□ -0.2
COMMD4-209ENST00000564068 HHATQ5VTY9 493 aa13.79□□□□□ -0.2
COMMD4-209ENST00000564068 OTUD6AQ7L8S5 288 aa13.79□□□□□ -0.2
COMMD4-209ENST00000564068 KIFC2Q96AC6 838 aa13.79□□□□□ -0.2
COMMD4-209ENST00000564068 ZIM3Q96PE6 472 aa13.79□□□□□ -0.2
COMMD4-209ENST00000564068 RFX7Q2KHR2 1363 aa13.79□□□□□ -0.2
COMMD4-209ENST00000564068 TRIM37O94972 964 aa13.79□□□□□ -0.2
COMMD4-209ENST00000564068 FOXO4P98177 505 aa13.79□□□□□ -0.2
COMMD4-209ENST00000564068 GLE1Q53GS7 698 aaKnown RBP13.79□□□□□ -0.2
COMMD4-209ENST00000564068 OR2W6PQ8NHA6 318 aa13.79□□□□□ -0.2
COMMD4-209ENST00000564068 HPS3Q969F9 1004 aa13.79□□□□□ -0.2
COMMD4-209ENST00000564068 GJA10Q969M2 543 aa13.79□□□□□ -0.2
COMMD4-209ENST00000564068 DNM3Q9UQ16 869 aa13.79□□□□□ -0.2
COMMD4-209ENST00000564068 CALUO43852 315 aaPredicted RBP13.78□□□□□ -0.2
COMMD4-209ENST00000564068 RABL6Q3YEC7 729 aaPredicted RBP13.78□□□□□ -0.2
COMMD4-209ENST00000564068 EPN3Q9H201 632 aa13.78□□□□□ -0.2
COMMD4-209ENST00000564068 HAUS2Q9NVX0 235 aa13.78□□□□□ -0.2
COMMD4-209ENST00000564068 ZBTB21Q9ULJ3 1066 aa13.78□□□□□ -0.2
COMMD4-209ENST00000564068 GNA14O95837 355 aa13.78□□□□□ -0.2
COMMD4-209ENST00000564068 MMEP08473 750 aa13.78□□□□□ -0.2
COMMD4-209ENST00000564068 NR2F2P24468 414 aa13.78□□□□□ -0.2
COMMD4-209ENST00000564068 DPYDQ12882 1025 aa13.78□□□□□ -0.2
COMMD4-209ENST00000564068 EZH2Q15910 746 aaKnown RBP13.78□□□□□ -0.2
COMMD4-209ENST00000564068 ALKBH5Q6P6C2 394 aaKnown RBP13.78□□□□□ -0.2
COMMD4-209ENST00000564068 ARMC9Q7Z3E5 817 aa13.78□□□□□ -0.2
COMMD4-209ENST00000564068 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.78□□□□□ -0.2
COMMD4-209ENST00000564068 DDX12PQ92771 950 aa13.78□□□□□ -0.2
COMMD4-209ENST00000564068 LACRTQ9GZZ8 138 aa13.78□□□□□ -0.2
COMMD4-209ENST00000564068 VCXQ9H320 206 aa13.78□□□□□ -0.2
COMMD4-209ENST00000564068 FAM114A2Q9NRY5 505 aa13.78□□□□□ -0.2
COMMD4-209ENST00000564068 RBM12Q9NTZ6 932 aaKnown RBP13.78□□□□□ -0.2
COMMD4-209ENST00000564068 TPX2Q9ULW0 747 aaKnown RBP13.78□□□□□ -0.2
COMMD4-209ENST00000564068 PSMD14O00487 310 aa13.78□□□□□ -0.2
COMMD4-209ENST00000564068 EXOC3O60645 756 aa13.78□□□□□ -0.2
COMMD4-209ENST00000564068 MDH1P40925 334 aaKnown RBP13.78□□□□□ -0.2
COMMD4-209ENST00000564068 WDR93Q6P2C0 686 aa13.78□□□□□ -0.2
COMMD4-209ENST00000564068 SPATA31A3Q5VYP0 1347 aa13.78□□□□□ -0.2
COMMD4-209ENST00000564068 MAP2K7O14733 419 aa13.77□□□□□ -0.2
COMMD4-209ENST00000564068 NMT2O60551 498 aa13.77□□□□□ -0.2
COMMD4-209ENST00000564068 HLA-DOAP06340 250 aa13.77□□□□□ -0.2
COMMD4-209ENST00000564068 TMOD1P28289 359 aa13.77□□□□□ -0.2
COMMD4-209ENST00000564068 ELF1P32519 619 aa13.77□□□□□ -0.2
COMMD4-209ENST00000564068 SLC1A4P43007 532 aa13.77□□□□□ -0.2
COMMD4-209ENST00000564068 KLK7P49862 253 aa13.77□□□□□ -0.2
COMMD4-209ENST00000564068 SEPT12Q8IYM1 358 aa13.77□□□□□ -0.2
COMMD4-209ENST00000564068 MYCT1Q8N699 235 aa13.77□□□□□ -0.2
COMMD4-209ENST00000564068 ENAHQ8N8S7 591 aaPredicted RBP13.77□□□□□ -0.2
COMMD4-209ENST00000564068 TBCKQ8TEA7 893 aa13.77□□□□□ -0.2
COMMD4-209ENST00000564068 MLXIPLQ9NP71 852 aa13.77□□□□□ -0.2
COMMD4-209ENST00000564068 PKD2L1Q9P0L9 805 aa13.77□□□□□ -0.2
COMMD4-209ENST00000564068 GGT7Q9UJ14 662 aa13.77□□□□□ -0.2
COMMD4-209ENST00000564068 COL4A3BPQ9Y5P4 624 aa13.77□□□□□ -0.2
COMMD4-209ENST00000564068 WDR19Q8NEZ3 1342 aa13.77□□□□□ -0.21
COMMD4-209ENST00000564068 SERPING1P05155 500 aa13.77□□□□□ -0.21
COMMD4-209ENST00000564068 FCER1AP12319 257 aa13.77□□□□□ -0.21
COMMD4-209ENST00000564068 CYP2J2P51589 502 aa13.77□□□□□ -0.21
COMMD4-209ENST00000564068 CHRNDQ07001 517 aa13.77□□□□□ -0.21
COMMD4-209ENST00000564068 TAF11Q15544 211 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms