RNA–Protein interactions for RNA: ENST00000563909.5

RNF40-205, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 711 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-205ENST00000563909 SCFD2Q8WU76 684 aa18.83■□□□□ 0.6
RNF40-205ENST00000563909 KIF1BPQ96EK5 621 aa18.83■□□□□ 0.6
RNF40-205ENST00000563909 PUS7LQ9H0K6 701 aaKnown RBP18.83■□□□□ 0.6
RNF40-205ENST00000563909 IRF2BPLQ9H1B7 796 aa18.83■□□□□ 0.6
RNF40-205ENST00000563909 ALG13Q9NP73 1137 aaKnown RBP18.83■□□□□ 0.6
RNF40-205ENST00000563909 DCHS1Q96JQ0 3298 aa18.82■□□□□ 0.6
RNF40-205ENST00000563909 CACNA1HO95180 2353 aa18.82■□□□□ 0.6
RNF40-205ENST00000563909 DMDP11532 3685 aa18.82■□□□□ 0.6
RNF40-205ENST00000563909 TXNP10599 105 aaKnown RBP18.82■□□□□ 0.6
RNF40-205ENST00000563909 PDE4DQ08499 809 aa18.82■□□□□ 0.6
RNF40-205ENST00000563909 CTC1Q2NKJ3 1217 aa18.82■□□□□ 0.6
RNF40-205ENST00000563909 SESTD1Q86VW0 696 aa18.82■□□□□ 0.6
RNF40-205ENST00000563909 GMCL1Q96IK5 515 aa18.82■□□□□ 0.6
RNF40-205ENST00000563909 BOLA2Q9H3K6 86 aa18.82■□□□□ 0.6
RNF40-205ENST00000563909 PRR12Q9ULL5 1215 aa18.82■□□□□ 0.6
RNF40-205ENST00000563909 LCTP09848 1927 aa18.81■□□□□ 0.6
RNF40-205ENST00000563909 LOC102724159A0A0B4J2E5 919 aa18.81■□□□□ 0.6
RNF40-205ENST00000563909 LGR5O75473 907 aa18.81■□□□□ 0.6
RNF40-205ENST00000563909 ZXDAP98168 799 aa18.81■□□□□ 0.6
RNF40-205ENST00000563909 PDE4BQ07343 736 aa18.81■□□□□ 0.6
RNF40-205ENST00000563909 PWP2Q15269 919 aaKnown RBP18.81■□□□□ 0.6
RNF40-205ENST00000563909 KCTD1Q719H9 257 aa18.81■□□□□ 0.6
RNF40-205ENST00000563909 ERMP1Q7Z2K6 904 aa18.81■□□□□ 0.6
RNF40-205ENST00000563909 YME1L1Q96TA2 773 aa18.81■□□□□ 0.6
RNF40-205ENST00000563909 ZNF287Q9HBT7 754 aa18.81■□□□□ 0.6
RNF40-205ENST00000563909 PTPDC1A2A3K4 754 aa18.8■□□□□ 0.6
RNF40-205ENST00000563909 GSG1L2A8MUP6 293 aa18.8■□□□□ 0.6
RNF40-205ENST00000563909 PLA2G6O60733 806 aa18.8■□□□□ 0.6
RNF40-205ENST00000563909 RAB11FIP3O75154 756 aa18.8■□□□□ 0.6
RNF40-205ENST00000563909 SMAD4Q13485 552 aaKnown RBP18.8■□□□□ 0.6
RNF40-205ENST00000563909 MBTPS1Q14703 1052 aa18.8■□□□□ 0.6
RNF40-205ENST00000563909 ZNF618Q5T7W0 954 aa18.8■□□□□ 0.6
RNF40-205ENST00000563909 FBXO11Q86XK2 927 aa18.8■□□□□ 0.6
RNF40-205ENST00000563909 AFG1LQ8WV93 481 aa18.8■□□□□ 0.6
RNF40-205ENST00000563909 STRBPQ96SI9 672 aaKnown RBP18.8■□□□□ 0.6
RNF40-205ENST00000563909 NFIBO00712 420 aa18.79■□□□□ 0.6
RNF40-205ENST00000563909 ICAM1P05362 532 aa18.79■□□□□ 0.6
RNF40-205ENST00000563909 CALML3P27482 149 aa18.79■□□□□ 0.6
RNF40-205ENST00000563909 VCPP55072 806 aaKnown RBP18.79■□□□□ 0.6
RNF40-205ENST00000563909 HYAL1Q12794 435 aa18.79■□□□□ 0.6
RNF40-205ENST00000563909 HDAC1Q13547 482 aaPredicted RBP18.79■□□□□ 0.6
RNF40-205ENST00000563909 TRAF7Q6Q0C0 670 aa18.79■□□□□ 0.6
RNF40-205ENST00000563909 C7orf31Q8N865 590 aa18.79■□□□□ 0.6
RNF40-205ENST00000563909 DBF4BQ8NFT6 615 aa18.79■□□□□ 0.6
RNF40-205ENST00000563909 KAT2BQ92831 832 aa18.79■□□□□ 0.6
RNF40-205ENST00000563909 RWDD1Q9H446 243 aaPredicted RBP18.79■□□□□ 0.6
RNF40-205ENST00000563909 DCTPP1Q9H773 170 aa18.79■□□□□ 0.6
RNF40-205ENST00000563909 GTF2IRD1Q9UHL9 959 aa18.79■□□□□ 0.6
RNF40-205ENST00000563909 VPS13AQ96RL7 3174 aa18.79■□□□□ 0.6
RNF40-205ENST00000563909 H0Y858 1186 aa18.78■□□□□ 0.6
RNF40-205ENST00000563909 UPP2O95045 317 aa18.78■□□□□ 0.6
RNF40-205ENST00000563909 TSPY3P0CV98 308 aa18.78■□□□□ 0.6
RNF40-205ENST00000563909 TSPY8P0CW00 308 aa18.78■□□□□ 0.6
RNF40-205ENST00000563909 RCSD1Q6JBY9 416 aa18.78■□□□□ 0.6
RNF40-205ENST00000563909 ZSCAN25Q6NSZ9 544 aa18.78■□□□□ 0.6
RNF40-205ENST00000563909 GIMAP6Q6P9H5 292 aa18.78■□□□□ 0.6
RNF40-205ENST00000563909 MPHOSPH6Q99547 160 aaKnown RBP18.78■□□□□ 0.6
RNF40-205ENST00000563909 IGFLR1Q9H665 355 aa18.78■□□□□ 0.6
RNF40-205ENST00000563909 TLR9Q9NR96 1032 aa18.78■□□□□ 0.6
RNF40-205ENST00000563909 HDAC6Q9UBN7 1215 aa18.78■□□□□ 0.6
RNF40-205ENST00000563909 CD207Q9UJ71 328 aa18.78■□□□□ 0.6
RNF40-205ENST00000563909 MYO7AQ13402 2215 aa18.78■□□□□ 0.6
RNF40-205ENST00000563909 RIF1Q5UIP0 2472 aaKnown RBP18.78■□□□□ 0.6
RNF40-205ENST00000563909 KMT2EQ8IZD2 1858 aa18.77■□□□□ 0.6
RNF40-205ENST00000563909 ARIH2O95376 493 aa18.77■□□□□ 0.6
RNF40-205ENST00000563909 MMP3P08254 477 aa18.77■□□□□ 0.6
RNF40-205ENST00000563909 ATP5JP18859 108 aa18.77■□□□□ 0.6
RNF40-205ENST00000563909 AVPR2P30518 371 aa18.77■□□□□ 0.6
RNF40-205ENST00000563909 PTK7Q13308 1070 aa18.77■□□□□ 0.6
RNF40-205ENST00000563909 MKRN4PQ13434 485 aaPredicted RBP18.77■□□□□ 0.6
RNF40-205ENST00000563909 TRIM71Q2Q1W2 868 aaKnown RBP18.77■□□□□ 0.6
RNF40-205ENST00000563909 SLC30A10Q6XR72 485 aa18.77■□□□□ 0.6
RNF40-205ENST00000563909 ASCL5Q7RTU5 278 aa18.77■□□□□ 0.6
RNF40-205ENST00000563909 NEDD1Q8NHV4 660 aa18.77■□□□□ 0.6
RNF40-205ENST00000563909 WNT8BQ93098 351 aa18.77■□□□□ 0.6
RNF40-205ENST00000563909 HAUS7Q99871 368 aa18.77■□□□□ 0.6
RNF40-205ENST00000563909 EMSYQ7Z589 1322 aa18.76■□□□□ 0.59
RNF40-205ENST00000563909 PROB1E7EW31 1015 aa18.76■□□□□ 0.59
RNF40-205ENST00000563909 TBX10O75333 385 aa18.76■□□□□ 0.59
RNF40-205ENST00000563909 CASTP20810 708 aaKnown RBP18.76■□□□□ 0.59
RNF40-205ENST00000563909 GTF2F1P35269 517 aaKnown RBP eCLIP18.76■□□□□ 0.59
RNF40-205ENST00000563909 TOP1MTQ969P6 601 aa18.76■□□□□ 0.59
RNF40-205ENST00000563909 FSD1Q9BTV5 496 aa18.76■□□□□ 0.59
RNF40-205ENST00000563909 LINC01565O15544 149 aa18.75■□□□□ 0.59
RNF40-205ENST00000563909 EDNRBP24530 442 aa18.75■□□□□ 0.59
RNF40-205ENST00000563909 TDO2P48775 406 aa18.75■□□□□ 0.59
RNF40-205ENST00000563909 TFAP4Q01664 338 aa18.75■□□□□ 0.59
RNF40-205ENST00000563909 SIGLEC14Q08ET2 396 aa18.75■□□□□ 0.59
RNF40-205ENST00000563909 RNF207Q6ZRF8 634 aa18.75■□□□□ 0.59
RNF40-205ENST00000563909 CHST3Q7LGC8 479 aa18.75■□□□□ 0.59
RNF40-205ENST00000563909 ALG1Q9BT22 464 aa18.75■□□□□ 0.59
RNF40-205ENST00000563909 TRPC6Q9Y210 931 aa18.75■□□□□ 0.59
RNF40-205ENST00000563909 MICAL3Q7RTP6 2002 aa18.74■□□□□ 0.59
RNF40-205ENST00000563909 LOC730098B7Z3J9 87 aa18.74■□□□□ 0.59
RNF40-205ENST00000563909 GRM6O15303 877 aa18.74■□□□□ 0.59
RNF40-205ENST00000563909 CTNNB1P35222 781 aa18.74■□□□□ 0.59
RNF40-205ENST00000563909 ID4P47928 161 aa18.74■□□□□ 0.59
RNF40-205ENST00000563909 ZNF200P98182 395 aaPredicted RBP18.74■□□□□ 0.59
RNF40-205ENST00000563909 RASGRP2Q7LDG7 609 aa18.74■□□□□ 0.59
RNF40-205ENST00000563909 LRRCC1Q9C099 1032 aa18.74■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms