RNA–Protein interactions for RNA: ENST00000563781.5

HERPUD1-207, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 3

Gene HERPUD1, Length 774 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-207ENST00000563781 GUCY1A2P33402 732 aa6.13□□□□□ -1.43
HERPUD1-207ENST00000563781 EIF1AXP47813 144 aaKnown RBP6.13□□□□□ -1.43
HERPUD1-207ENST00000563781 PRKG1Q13976 671 aa6.13□□□□□ -1.43
HERPUD1-207ENST00000563781 MAP3K11Q16584 847 aa6.13□□□□□ -1.43
HERPUD1-207ENST00000563781 IMMTQ16891 758 aaKnown RBP6.13□□□□□ -1.43
HERPUD1-207ENST00000563781 AKNAD1Q5T1N1 836 aa6.13□□□□□ -1.43
HERPUD1-207ENST00000563781 COL13A1Q5TAT6 717 aaPredicted RBP6.13□□□□□ -1.43
HERPUD1-207ENST00000563781 DCAF15Q66K64 600 aa6.13□□□□□ -1.43
HERPUD1-207ENST00000563781 PPP1R3FQ6ZSY5 799 aaPredicted RBP6.13□□□□□ -1.43
HERPUD1-207ENST00000563781 AMOTL1Q8IY63 956 aa6.13□□□□□ -1.43
HERPUD1-207ENST00000563781 MB21D2Q8IYB1 491 aaPredicted RBP6.13□□□□□ -1.43
HERPUD1-207ENST00000563781 CRACR2BQ8N4Y2 399 aaPredicted RBP6.13□□□□□ -1.43
HERPUD1-207ENST00000563781 DDX55Q8NHQ9 600 aaKnown RBP eCLIP6.13□□□□□ -1.43
HERPUD1-207ENST00000563781 HOOK2Q96ED9 719 aa6.13□□□□□ -1.43
HERPUD1-207ENST00000563781 TINF2Q9BSI4 451 aa6.13□□□□□ -1.43
HERPUD1-207ENST00000563781 ZNF341Q9BYN7 854 aa6.13□□□□□ -1.43
HERPUD1-207ENST00000563781 GSX2Q9BZM3 304 aa6.13□□□□□ -1.43
HERPUD1-207ENST00000563781 XPO5Q9HAV4 1204 aaKnown RBP eCLIP6.13□□□□□ -1.43
HERPUD1-207ENST00000563781 SWAP70Q9UH65 585 aa6.13□□□□□ -1.43
HERPUD1-207ENST00000563781 USP20Q9Y2K6 914 aa6.13□□□□□ -1.43
HERPUD1-207ENST00000563781 PLIN4Q96Q06 1357 aa6.13□□□□□ -1.43
HERPUD1-207ENST00000563781 IGKV6D-41A0A0C4DH26 115 aa6.12□□□□□ -1.43
HERPUD1-207ENST00000563781 B4E1Z4 1266 aa6.12□□□□□ -1.43
HERPUD1-207ENST00000563781 UBE2Q2LH0YL09 131 aa6.12□□□□□ -1.43
HERPUD1-207ENST00000563781 GDF11O95390 407 aa6.12□□□□□ -1.43
HERPUD1-207ENST00000563781 LAMB1P07942 1786 aa6.12□□□□□ -1.43
HERPUD1-207ENST00000563781 PCP11498 1178 aaKnown RBP6.12□□□□□ -1.43
HERPUD1-207ENST00000563781 LORP23490 312 aaPredicted RBP6.12□□□□□ -1.43
HERPUD1-207ENST00000563781 NF2P35240 595 aa6.12□□□□□ -1.43
HERPUD1-207ENST00000563781 CAP2P40123 477 aa6.12□□□□□ -1.43
HERPUD1-207ENST00000563781 NOVP48745 357 aa6.12□□□□□ -1.43
HERPUD1-207ENST00000563781 ANTXR2P58335 489 aa6.12□□□□□ -1.43
HERPUD1-207ENST00000563781 FKBP1BP68106 108 aa6.12□□□□□ -1.43
HERPUD1-207ENST00000563781 SPEM2Q0P670 501 aa6.12□□□□□ -1.43
HERPUD1-207ENST00000563781 ADCK5Q3MIX3 580 aa6.12□□□□□ -1.43
HERPUD1-207ENST00000563781 NOL9Q5SY16 702 aaKnown RBP6.12□□□□□ -1.43
HERPUD1-207ENST00000563781 CYB5R4Q7L1T6 521 aa6.12□□□□□ -1.43
HERPUD1-207ENST00000563781 CCDC84Q86UT8 332 aaPredicted RBP6.12□□□□□ -1.43
HERPUD1-207ENST00000563781 ATCAYQ86WG3 371 aa6.12□□□□□ -1.43
HERPUD1-207ENST00000563781 NEDD1Q8NHV4 660 aa6.12□□□□□ -1.43
HERPUD1-207ENST00000563781 ZKSCAN4Q969J2 545 aaPredicted RBP6.12□□□□□ -1.43
HERPUD1-207ENST00000563781 CLMNQ96JQ2 1002 aa6.12□□□□□ -1.43
HERPUD1-207ENST00000563781 TBC1D32Q96NH3 1257 aa6.12□□□□□ -1.43
HERPUD1-207ENST00000563781 WRNIP1Q96S55 665 aa6.12□□□□□ -1.43
HERPUD1-207ENST00000563781 KIF2CQ99661 725 aa6.12□□□□□ -1.43
HERPUD1-207ENST00000563781 PAPPA2Q9BXP8 1791 aa6.12□□□□□ -1.43
HERPUD1-207ENST00000563781 C22orf23Q9BZE7 217 aa6.12□□□□□ -1.43
HERPUD1-207ENST00000563781 RNF41Q9H4P4 317 aaPredicted RBP6.12□□□□□ -1.43
HERPUD1-207ENST00000563781 ZNF408Q9H9D4 720 aa6.12□□□□□ -1.43
HERPUD1-207ENST00000563781 MKNK2Q9HBH9 465 aa6.12□□□□□ -1.43
HERPUD1-207ENST00000563781 GBA2Q9HCG7 927 aaPredicted RBP6.12□□□□□ -1.43
HERPUD1-207ENST00000563781 FAM13BQ9NYF5 915 aa6.12□□□□□ -1.43
HERPUD1-207ENST00000563781 FRMD4AQ9P2Q2 1039 aaPredicted RBP6.12□□□□□ -1.43
HERPUD1-207ENST00000563781 BAZ2AQ9UIF9 1905 aaKnown RBP6.12□□□□□ -1.43
HERPUD1-207ENST00000563781 ZBTB21Q9ULJ3 1066 aa6.12□□□□□ -1.43
HERPUD1-207ENST00000563781 ANGEL1Q9UNK9 670 aaKnown RBP6.12□□□□□ -1.43
HERPUD1-207ENST00000563781 KCNMB2Q9Y691 235 aa6.12□□□□□ -1.43
HERPUD1-207ENST00000563781 SNCAIPQ9Y6H5 919 aa6.12□□□□□ -1.43
HERPUD1-207ENST00000563781 LAMA4Q16363 1823 aa6.11□□□□□ -1.43
HERPUD1-207ENST00000563781 RANBP6O60518 1105 aaKnown RBP6.11□□□□□ -1.43
HERPUD1-207ENST00000563781 CTNND1O60716 968 aaKnown RBP6.11□□□□□ -1.43
HERPUD1-207ENST00000563781 GH2P01242 217 aa6.11□□□□□ -1.43
HERPUD1-207ENST00000563781 P4HBP07237 508 aaKnown RBP6.11□□□□□ -1.43
HERPUD1-207ENST00000563781 SLC3A2P08195 630 aaKnown RBP6.11□□□□□ -1.43
HERPUD1-207ENST00000563781 ARAFP10398 606 aa6.11□□□□□ -1.43
HERPUD1-207ENST00000563781 CPA1P15085 419 aa6.11□□□□□ -1.43
HERPUD1-207ENST00000563781 ZKSCAN1P17029 563 aaPredicted RBP6.11□□□□□ -1.43
HERPUD1-207ENST00000563781 MCCP23508 829 aa6.11□□□□□ -1.43
HERPUD1-207ENST00000563781 IREB2P48200 963 aaKnown RBP6.11□□□□□ -1.43
HERPUD1-207ENST00000563781 NT5C2P49902 561 aa6.11□□□□□ -1.43
HERPUD1-207ENST00000563781 ANAPC15P60006 121 aa6.11□□□□□ -1.43
HERPUD1-207ENST00000563781 TFAP4Q01664 338 aa6.11□□□□□ -1.43
HERPUD1-207ENST00000563781 PDE4BQ07343 736 aa6.11□□□□□ -1.43
HERPUD1-207ENST00000563781 CCINQ13939 588 aa6.11□□□□□ -1.43
HERPUD1-207ENST00000563781 VGLL4Q14135 290 aa6.11□□□□□ -1.43
HERPUD1-207ENST00000563781 KRT32Q14532 448 aa6.11□□□□□ -1.43
HERPUD1-207ENST00000563781 SEPT2Q15019 361 aa6.11□□□□□ -1.43
HERPUD1-207ENST00000563781 CERKLQ49MI3 558 aaPredicted RBP6.11□□□□□ -1.43
HERPUD1-207ENST00000563781 FAM47AQ5JRC9 791 aa6.11□□□□□ -1.43
HERPUD1-207ENST00000563781 RRP12Q5JTH9 1297 aaKnown RBP6.11□□□□□ -1.43
HERPUD1-207ENST00000563781 ALKBH2Q6NS38 261 aa6.11□□□□□ -1.43
HERPUD1-207ENST00000563781 MFSD6Q6ZSS7 791 aa6.11□□□□□ -1.43
HERPUD1-207ENST00000563781 ARMC9Q7Z3E5 817 aa6.11□□□□□ -1.43
HERPUD1-207ENST00000563781 CLEC10AQ8IUN9 316 aa6.11□□□□□ -1.43
HERPUD1-207ENST00000563781 SIAH1Q8IUQ4 282 aa6.11□□□□□ -1.43
HERPUD1-207ENST00000563781 SCYL3Q8IZE3 742 aa6.11□□□□□ -1.43
HERPUD1-207ENST00000563781 CMTR1Q8N1G2 835 aaKnown RBP6.11□□□□□ -1.43
HERPUD1-207ENST00000563781 C2orf69Q8N8R5 385 aa6.11□□□□□ -1.43
HERPUD1-207ENST00000563781 GPR152Q8TDT2 470 aa6.11□□□□□ -1.43
HERPUD1-207ENST00000563781 ACDQ96AP0 544 aa6.11□□□□□ -1.43
HERPUD1-207ENST00000563781 CCDC17Q96LX7 622 aa6.11□□□□□ -1.43
HERPUD1-207ENST00000563781 JAKMIP1Q96N16 626 aaKnown RBP6.11□□□□□ -1.43
HERPUD1-207ENST00000563781 TM6SF1Q9BZW5 370 aa6.11□□□□□ -1.43
HERPUD1-207ENST00000563781 KRT23Q9C075 422 aa6.11□□□□□ -1.43
HERPUD1-207ENST00000563781 TGIF2Q9GZN2 237 aa6.11□□□□□ -1.43
HERPUD1-207ENST00000563781 CNNM2Q9H8M5 875 aa6.11□□□□□ -1.43
HERPUD1-207ENST00000563781 EFCC1Q9HA90 598 aa6.11□□□□□ -1.43
HERPUD1-207ENST00000563781 AVENQ9NQS1 362 aaPredicted RBP6.11□□□□□ -1.43
HERPUD1-207ENST00000563781 IL17RBQ9NRM6 502 aa6.11□□□□□ -1.43
HERPUD1-207ENST00000563781 ZSWIM5Q9P217 1185 aa6.11□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms