RNA–Protein interactions for RNA: ENST00000563346.1

TSC2-219, Transcript of TSC complex subunit 2, humanhuman

TSL 2

Gene TSC2, Length 553 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC2-219ENST00000563346 GBF1Q92538 1859 aa20.11■□□□□ 0.81
TSC2-219ENST00000563346 PITPNM1O00562 1244 aa20.1■□□□□ 0.81
TSC2-219ENST00000563346 RFC2P35250 354 aa20.1■□□□□ 0.81
TSC2-219ENST00000563346 HSD17B4P51659 736 aa20.1■□□□□ 0.81
TSC2-219ENST00000563346 TRAF1Q13077 416 aa20.1■□□□□ 0.81
TSC2-219ENST00000563346 USP38Q8NB14 1042 aa20.1■□□□□ 0.81
TSC2-219ENST00000563346 NCOA7Q8NI08 942 aa20.1■□□□□ 0.81
TSC2-219ENST00000563346 MTMR8Q96EF0 704 aa20.1■□□□□ 0.81
TSC2-219ENST00000563346 MAP3K20Q9NYL2 800 aaKnown RBP20.1■□□□□ 0.81
TSC2-219ENST00000563346 DDX41Q9UJV9 622 aaKnown RBP20.1■□□□□ 0.81
TSC2-219ENST00000563346 IQCF3P0C7M6 154 aa20.09■□□□□ 0.81
TSC2-219ENST00000563346 MYCLP12524 364 aaPredicted RBP20.09■□□□□ 0.81
TSC2-219ENST00000563346 ATP2A2P16615 1042 aaKnown RBP20.09■□□□□ 0.81
TSC2-219ENST00000563346 RABGGTBP53611 331 aa20.09■□□□□ 0.81
TSC2-219ENST00000563346 GRM4Q14833 912 aa20.09■□□□□ 0.81
TSC2-219ENST00000563346 WTAPQ15007 396 aa20.09■□□□□ 0.81
TSC2-219ENST00000563346 PTGISQ16647 500 aa20.09■□□□□ 0.81
TSC2-219ENST00000563346 DGKDQ16760 1214 aa20.09■□□□□ 0.81
TSC2-219ENST00000563346 CCDC155Q8N6L0 562 aa20.09■□□□□ 0.81
TSC2-219ENST00000563346 PPM1EQ8WY54 764 aa20.09■□□□□ 0.81
TSC2-219ENST00000563346 FTOQ9C0B1 505 aaKnown RBP eCLIP20.09■□□□□ 0.81
TSC2-219ENST00000563346 YBX2Q9Y2T7 364 aaKnown RBP20.09■□□□□ 0.81
TSC2-219ENST00000563346 E7EWF7 191 aa20.08■□□□□ 0.81
TSC2-219ENST00000563346 OPLAHO14841 1288 aa20.08■□□□□ 0.81
TSC2-219ENST00000563346 PPP1R11O60927 126 aaPredicted RBP20.08■□□□□ 0.81
TSC2-219ENST00000563346 HOXA13P31271 388 aaPredicted RBP20.08■□□□□ 0.81
TSC2-219ENST00000563346 LAMC2Q13753 1193 aa20.08■□□□□ 0.81
TSC2-219ENST00000563346 DHX37Q8IY37 1157 aaKnown RBP20.08■□□□□ 0.81
TSC2-219ENST00000563346 SAMD3Q8N6K7 520 aa20.08■□□□□ 0.81
TSC2-219ENST00000563346 VWCEQ96DN2 955 aa20.08■□□□□ 0.81
TSC2-219ENST00000563346 PIGSQ96S52 555 aa20.08■□□□□ 0.81
TSC2-219ENST00000563346 RAPGEFL1Q9UHV5 662 aa20.08■□□□□ 0.81
TSC2-219ENST00000563346 PCDHA11Q9Y5I1 949 aa20.08■□□□□ 0.81
TSC2-219ENST00000563346 SCN5AQ14524 2016 aa20.08■□□□□ 0.8
TSC2-219ENST00000563346 SGSM2O43147 1006 aa20.07■□□□□ 0.8
TSC2-219ENST00000563346 IGFBP4P22692 258 aa20.07■□□□□ 0.8
TSC2-219ENST00000563346 GHRHRQ02643 423 aa20.07■□□□□ 0.8
TSC2-219ENST00000563346 TMEM67Q5HYA8 995 aa20.07■□□□□ 0.8
TSC2-219ENST00000563346 PPP2R2DQ66LE6 453 aa20.07■□□□□ 0.8
TSC2-219ENST00000563346 CATIPQ7Z7H3 387 aa20.07■□□□□ 0.8
TSC2-219ENST00000563346 EMID1Q96A84 441 aaPredicted RBP20.07■□□□□ 0.8
TSC2-219ENST00000563346 PDCD2LQ9BRP1 358 aa20.07■□□□□ 0.8
TSC2-219ENST00000563346 KATNAL1Q9BW62 490 aa20.07■□□□□ 0.8
TSC2-219ENST00000563346 RIOX1Q9H6W3 641 aa20.07■□□□□ 0.8
TSC2-219ENST00000563346 TANC1Q9C0D5 1861 aa20.07■□□□□ 0.8
TSC2-219ENST00000563346 GCOM1H8Y6P7 765 aaPredicted RBP20.06■□□□□ 0.8
TSC2-219ENST00000563346 POLR2MP0CAP2 368 aa20.06■□□□□ 0.8
TSC2-219ENST00000563346 GDF6Q6KF10 455 aaPredicted RBP20.06■□□□□ 0.8
TSC2-219ENST00000563346 KCNV1Q6PIU1 500 aa20.06■□□□□ 0.8
TSC2-219ENST00000563346 STOX1Q6ZVD7 989 aa20.06■□□□□ 0.8
TSC2-219ENST00000563346 SESTD1Q86VW0 696 aa20.06■□□□□ 0.8
TSC2-219ENST00000563346 C7orf31Q8N865 590 aa20.06■□□□□ 0.8
TSC2-219ENST00000563346 CAGE1Q8TC20 777 aa20.06■□□□□ 0.8
TSC2-219ENST00000563346 SYMPKQ92797 1274 aaKnown RBP20.06■□□□□ 0.8
TSC2-219ENST00000563346 KAT2BQ92831 832 aa20.06■□□□□ 0.8
TSC2-219ENST00000563346 SENP2Q9HC62 589 aa20.06■□□□□ 0.8
TSC2-219ENST00000563346 MYOGP15173 224 aa20.05■□□□□ 0.8
TSC2-219ENST00000563346 PSEN2P49810 448 aa20.05■□□□□ 0.8
TSC2-219ENST00000563346 PGM5Q15124 567 aa20.05■□□□□ 0.8
TSC2-219ENST00000563346 FCHSD1Q86WN1 690 aa20.05■□□□□ 0.8
TSC2-219ENST00000563346 PIAS4Q8N2W9 510 aaPredicted RBP20.05■□□□□ 0.8
TSC2-219ENST00000563346 PPTC7Q8NI37 304 aa20.05■□□□□ 0.8
TSC2-219ENST00000563346 AFAP1L1Q8TED9 768 aa20.05■□□□□ 0.8
TSC2-219ENST00000563346 SLC9A7Q96T83 725 aa20.05■□□□□ 0.8
TSC2-219ENST00000563346 ALG1Q9BT22 464 aa20.05■□□□□ 0.8
TSC2-219ENST00000563346 TAF6LQ9Y6J9 622 aa20.05■□□□□ 0.8
TSC2-219ENST00000563346 PNMA6FA0A0J9YX94 578 aa20.04■□□□□ 0.8
TSC2-219ENST00000563346 COL9A1P20849 921 aa20.04■□□□□ 0.8
TSC2-219ENST00000563346 CCND2P30279 289 aa20.04■□□□□ 0.8
TSC2-219ENST00000563346 TROAPQ12815 778 aa20.04■□□□□ 0.8
TSC2-219ENST00000563346 MFSD10Q14728 455 aa20.04■□□□□ 0.8
TSC2-219ENST00000563346 VSIG10LQ86VR7 867 aa20.04■□□□□ 0.8
TSC2-219ENST00000563346 MAP4K1Q92918 833 aa20.04■□□□□ 0.8
TSC2-219ENST00000563346 GTF2IRD1Q9UHL9 959 aa20.04■□□□□ 0.8
TSC2-219ENST00000563346 MYH7BA7E2Y1 1941 aa20.04■□□□□ 0.8
TSC2-219ENST00000563346 CYTH3O43739 400 aa20.03■□□□□ 0.8
TSC2-219ENST00000563346 SORBS3O60504 671 aa20.03■□□□□ 0.8
TSC2-219ENST00000563346 ZNF286BP0CG31 522 aa20.03■□□□□ 0.8
TSC2-219ENST00000563346 ADGRE1Q14246 886 aa20.03■□□□□ 0.8
TSC2-219ENST00000563346 CCDC85BQ15834 202 aaPredicted RBP20.03■□□□□ 0.8
TSC2-219ENST00000563346 KIAA0753Q2KHM9 967 aa20.03■□□□□ 0.8
TSC2-219ENST00000563346 SLC35G1Q2M3R5 365 aa20.03■□□□□ 0.8
TSC2-219ENST00000563346 PHOSPHO2Q8TCD6 241 aa20.03■□□□□ 0.8
TSC2-219ENST00000563346 PIBF1Q8WXW3 757 aa20.03■□□□□ 0.8
TSC2-219ENST00000563346 SPATA33Q96N06 139 aa20.03■□□□□ 0.8
TSC2-219ENST00000563346 HDAC6Q9UBN7 1215 aa20.03■□□□□ 0.8
TSC2-219ENST00000563346 RBM8AQ9Y5S9 174 aaKnown RBP20.03■□□□□ 0.8
TSC2-219ENST00000563346 KIF28PB7ZC32 967 aa20.02■□□□□ 0.8
TSC2-219ENST00000563346 GGPS1O95749 300 aa20.02■□□□□ 0.8
TSC2-219ENST00000563346 F2P00734 622 aa20.02■□□□□ 0.8
TSC2-219ENST00000563346 SELPP16109 830 aa20.02■□□□□ 0.8
TSC2-219ENST00000563346 TJAP1Q5JTD0 557 aa20.02■□□□□ 0.8
TSC2-219ENST00000563346 CELF3Q5SZQ8 465 aaKnown RBP20.02■□□□□ 0.8
TSC2-219ENST00000563346 MYSM1Q5VVJ2 828 aa20.02■□□□□ 0.8
TSC2-219ENST00000563346 CASC1Q6TDU7 716 aa20.02■□□□□ 0.8
TSC2-219ENST00000563346 LRRC8DQ7L1W4 858 aa20.02■□□□□ 0.8
TSC2-219ENST00000563346 IL31RAQ8NI17 732 aa20.02■□□□□ 0.8
TSC2-219ENST00000563346 CTCFLQ8NI51 663 aaPredicted RBP20.02■□□□□ 0.8
TSC2-219ENST00000563346 IGDCC4Q8TDY8 1250 aa20.02■□□□□ 0.8
TSC2-219ENST00000563346 ZFP91Q96JP5 570 aaPredicted RBP20.02■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms