RNA–Protein interactions for RNA: ENST00000563149.1

USB1-207, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2 BASIC

Gene USB1, Length 1,751 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-207ENST00000563149 EIF4A3P38919 411 aaKnown RBP14.52□□□□□ -0.09
USB1-207ENST00000563149 KCNQ4P56696 695 aa14.52□□□□□ -0.09
USB1-207ENST00000563149 RHBDL3P58872 404 aa14.52□□□□□ -0.09
USB1-207ENST00000563149 CCDC24Q8N4L8 307 aa14.52□□□□□ -0.09
USB1-207ENST00000563149 SYN2Q92777 582 aaPredicted RBP14.52□□□□□ -0.09
USB1-207ENST00000563149 CPVLQ9H3G5 476 aa14.52□□□□□ -0.09
USB1-207ENST00000563149 MMRN2Q9H8L6 949 aa14.52□□□□□ -0.09
USB1-207ENST00000563149 FAM204AQ9H8W3 233 aa14.52□□□□□ -0.09
USB1-207ENST00000563149 VAT1LQ9HCJ6 419 aa14.52□□□□□ -0.09
USB1-207ENST00000563149 RNF14Q9UBS8 474 aa14.52□□□□□ -0.09
USB1-207ENST00000563149 DUSP10Q9Y6W6 482 aa14.52□□□□□ -0.09
USB1-207ENST00000563149 ZC3H4Q9UPT8 1303 aaKnown RBP14.52□□□□□ -0.09
USB1-207ENST00000563149 A0A0U1RQG5 324 aaPredicted RBP14.51□□□□□ -0.09
USB1-207ENST00000563149 AKR1B10O60218 316 aa14.51□□□□□ -0.09
USB1-207ENST00000563149 SNHG28P0DPA3 235 aa14.51□□□□□ -0.09
USB1-207ENST00000563149 PDXDC1Q6P996 788 aa14.51□□□□□ -0.09
USB1-207ENST00000563149 SMIM5Q71RC9 77 aa14.51□□□□□ -0.09
USB1-207ENST00000563149 USP17L5A8MUK1 530 aa14.5□□□□□ -0.09
USB1-207ENST00000563149 ZNF185O15231 689 aa14.5□□□□□ -0.09
USB1-207ENST00000563149 GNA14O95837 355 aa14.5□□□□□ -0.09
USB1-207ENST00000563149 GCFC2P16383 781 aaKnown RBP14.5□□□□□ -0.09
USB1-207ENST00000563149 TNFRSF8P28908 595 aa14.5□□□□□ -0.09
USB1-207ENST00000563149 MAGEA1P43355 309 aa14.5□□□□□ -0.09
USB1-207ENST00000563149 SF3B2Q13435 895 aaKnown RBP14.5□□□□□ -0.09
USB1-207ENST00000563149 NFIXQ14938 502 aa14.5□□□□□ -0.09
USB1-207ENST00000563149 FAM98CQ17RN3 349 aaKnown RBP14.5□□□□□ -0.09
USB1-207ENST00000563149 ASTE1Q2TB18 679 aaPredicted RBP14.5□□□□□ -0.09
USB1-207ENST00000563149 GLE1Q53GS7 698 aaKnown RBP14.5□□□□□ -0.09
USB1-207ENST00000563149 LRRC55Q6ZSA7 311 aa14.5□□□□□ -0.09
USB1-207ENST00000563149 SNX29Q8TEQ0 813 aa14.5□□□□□ -0.09
USB1-207ENST00000563149 AENQ8WTP8 325 aaKnown RBP14.5□□□□□ -0.09
USB1-207ENST00000563149 BAP1Q92560 729 aa14.5□□□□□ -0.09
USB1-207ENST00000563149 DDX12PQ92771 950 aa14.5□□□□□ -0.09
USB1-207ENST00000563149 CEP63Q96MT8 703 aa14.5□□□□□ -0.09
USB1-207ENST00000563149 SELENOOQ9BVL4 669 aa14.5□□□□□ -0.09
USB1-207ENST00000563149 LUC7LQ9NQ29 371 aaKnown RBP14.5□□□□□ -0.09
USB1-207ENST00000563149 TMEM260Q9NX78 707 aa14.5□□□□□ -0.09
USB1-207ENST00000563149 MTMR4Q9NYA4 1195 aa14.5□□□□□ -0.09
USB1-207ENST00000563149 NHSQ6T4R5 1651 aa14.5□□□□□ -0.09
USB1-207ENST00000563149 LRRC53A6NM62 1247 aa14.5□□□□□ -0.09
USB1-207ENST00000563149 RBAK-RBAKDNI3L0D1 243 aa14.5□□□□□ -0.09
USB1-207ENST00000563149 CLSTN1O94985 981 aa14.5□□□□□ -0.09
USB1-207ENST00000563149 RFC4P35249 363 aa14.5□□□□□ -0.09
USB1-207ENST00000563149 PAFAH1B1P43034 410 aa14.5□□□□□ -0.09
USB1-207ENST00000563149 GPSM2P81274 684 aa14.5□□□□□ -0.09
USB1-207ENST00000563149 FKBP3Q00688 224 aaKnown RBP14.5□□□□□ -0.09
USB1-207ENST00000563149 HYIQ5T013 277 aa14.5□□□□□ -0.09
USB1-207ENST00000563149 RRAGAQ7L523 313 aa14.5□□□□□ -0.09
USB1-207ENST00000563149 DYMQ7RTS9 669 aa14.5□□□□□ -0.09
USB1-207ENST00000563149 KRT26Q7Z3Y9 468 aa14.5□□□□□ -0.09
USB1-207ENST00000563149 SRLQ86TD4 932 aa14.5□□□□□ -0.09
USB1-207ENST00000563149 MYOCDQ8IZQ8 938 aa14.5□□□□□ -0.09
USB1-207ENST00000563149 SPATA4Q8NEY3 305 aa14.5□□□□□ -0.09
USB1-207ENST00000563149 CERKQ8TCT0 537 aa14.5□□□□□ -0.09
USB1-207ENST00000563149 HPS3Q969F9 1004 aa14.5□□□□□ -0.09
USB1-207ENST00000563149 EEF2KMTQ96G04 330 aa14.5□□□□□ -0.09
USB1-207ENST00000563149 OSBPL9Q96SU4 736 aa14.5□□□□□ -0.09
USB1-207ENST00000563149 UBA5Q9GZZ9 404 aa14.5□□□□□ -0.09
USB1-207ENST00000563149 NT5C3AQ9H0P0 336 aa14.5□□□□□ -0.09
USB1-207ENST00000563149 FAM207AQ9NSI2 230 aaPredicted RBP14.5□□□□□ -0.09
USB1-207ENST00000563149 BMP2KQ9NSY1 1161 aaPredicted RBP14.5□□□□□ -0.09
USB1-207ENST00000563149 CEP72Q9P209 647 aa14.5□□□□□ -0.09
USB1-207ENST00000563149 GGA1Q9UJY5 639 aa14.5□□□□□ -0.09
USB1-207ENST00000563149 CCNL1Q9UK58 526 aaPredicted RBP14.5□□□□□ -0.09
USB1-207ENST00000563149 CAPN6Q9Y6Q1 641 aa14.5□□□□□ -0.09
USB1-207ENST00000563149 MYO3BQ8WXR4 1341 aa14.49□□□□□ -0.09
USB1-207ENST00000563149 KDM3AQ9Y4C1 1321 aa14.49□□□□□ -0.09
USB1-207ENST00000563149 BTAF1O14981 1849 aa14.49□□□□□ -0.09
USB1-207ENST00000563149 FOCADQ5VW36 1801 aa14.49□□□□□ -0.09
USB1-207ENST00000563149 IGKV6D-41A0A0C4DH26 115 aa14.49□□□□□ -0.09
USB1-207ENST00000563149 PNMA6FA0A0J9YX94 578 aa14.49□□□□□ -0.09
USB1-207ENST00000563149 SLC37A4O43826 429 aa14.49□□□□□ -0.09
USB1-207ENST00000563149 EDIL3O43854 480 aa14.49□□□□□ -0.09
USB1-207ENST00000563149 PLEKP08567 350 aaPredicted RBP14.49□□□□□ -0.09
USB1-207ENST00000563149 CLK2P49760 499 aaKnown RBP14.49□□□□□ -0.09
USB1-207ENST00000563149 MARSP56192 900 aaKnown RBP14.49□□□□□ -0.09
USB1-207ENST00000563149 C2orf54Q08AI8 447 aa14.49□□□□□ -0.09
USB1-207ENST00000563149 VPS72Q15906 364 aa14.49□□□□□ -0.09
USB1-207ENST00000563149 CACNA2D4Q7Z3S7 1137 aa14.49□□□□□ -0.09
USB1-207ENST00000563149 CNBD1Q8NA66 436 aa14.49□□□□□ -0.09
USB1-207ENST00000563149 RNF216Q9NWF9 866 aaPredicted RBP14.49□□□□□ -0.09
USB1-207ENST00000563149 FEZ2Q9UHY8 353 aaPredicted RBP14.49□□□□□ -0.09
USB1-207ENST00000563149 COL4A3BPQ9Y5P4 624 aa14.49□□□□□ -0.09
USB1-207ENST00000563149 EPHB6O15197 1021 aa14.48□□□□□ -0.09
USB1-207ENST00000563149 PHACTR2O75167 634 aa14.48□□□□□ -0.09
USB1-207ENST00000563149 MOCS3O95396 460 aa14.48□□□□□ -0.09
USB1-207ENST00000563149 TDP2O95551 362 aa14.48□□□□□ -0.09
USB1-207ENST00000563149 GABPAQ06546 454 aa14.48□□□□□ -0.09
USB1-207ENST00000563149 ZCWPW2Q504Y3 356 aa14.48□□□□□ -0.09
USB1-207ENST00000563149 TRAPPC3LQ5T215 181 aa14.48□□□□□ -0.09
USB1-207ENST00000563149 CCDC181Q5TID7 509 aa14.48□□□□□ -0.09
USB1-207ENST00000563149 RPGRQ92834 1020 aaKnown RBP14.48□□□□□ -0.09
USB1-207ENST00000563149 COA7Q96BR5 231 aa14.48□□□□□ -0.09
USB1-207ENST00000563149 NOX5Q96PH1 765 aa14.48□□□□□ -0.09
USB1-207ENST00000563149 GLT8D2Q9H1C3 349 aa14.48□□□□□ -0.09
USB1-207ENST00000563149 MLXIPQ9HAP2 919 aa14.48□□□□□ -0.09
USB1-207ENST00000563149 PODXL2Q9NZ53 605 aa14.48□□□□□ -0.09
USB1-207ENST00000563149 GOLGA8KD6RF30 607 aa14.47□□□□□ -0.09
USB1-207ENST00000563149 NKRFO15226 690 aaKnown RBP eCLIP14.47□□□□□ -0.09
USB1-207ENST00000563149 UFL1O94874 794 aa14.47□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms