RNA–Protein interactions for RNA: ENST00000563109.1

RAB40C-207, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 710 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-207ENST00000563109 ZNF76P36508 570 aa21.45■■□□□ 1.02
RAB40C-207ENST00000563109 CACNB2Q08289 660 aaPredicted RBP21.45■■□□□ 1.02
RAB40C-207ENST00000563109 TRIM32Q13049 653 aa21.45■■□□□ 1.02
RAB40C-207ENST00000563109 ACVR2BQ13705 512 aa21.45■■□□□ 1.02
RAB40C-207ENST00000563109 EEPD1Q7L9B9 569 aa21.45■■□□□ 1.02
RAB40C-207ENST00000563109 VSIG10LQ86VR7 867 aa21.45■■□□□ 1.02
RAB40C-207ENST00000563109 TBCKQ8TEA7 893 aa21.45■■□□□ 1.02
RAB40C-207ENST00000563109 TNFRSF25Q93038 417 aa21.45■■□□□ 1.02
RAB40C-207ENST00000563109 DDX49Q9Y6V7 483 aaKnown RBP21.45■■□□□ 1.02
RAB40C-207ENST00000563109 STX6O43752 255 aa21.44■■□□□ 1.02
RAB40C-207ENST00000563109 GNPTABQ3T906 1256 aa21.44■■□□□ 1.02
RAB40C-207ENST00000563109 NOSTRINQ8IVI9 506 aa21.44■■□□□ 1.02
RAB40C-207ENST00000563109 CYBAP13498 195 aa21.43■■□□□ 1.02
RAB40C-207ENST00000563109 INF2Q27J81 1249 aa21.43■■□□□ 1.02
RAB40C-207ENST00000563109 MAP3K21Q5TCX8 1036 aa21.43■■□□□ 1.02
RAB40C-207ENST00000563109 NLRX1Q86UT6 975 aa21.43■■□□□ 1.02
RAB40C-207ENST00000563109 NAP1L4Q99733 375 aaKnown RBP21.43■■□□□ 1.02
RAB40C-207ENST00000563109 CYP3A4P08684 503 aa21.42■■□□□ 1.02
RAB40C-207ENST00000563109 CNGA1P29973 690 aa21.42■■□□□ 1.02
RAB40C-207ENST00000563109 USP11P51784 963 aa21.42■■□□□ 1.02
RAB40C-207ENST00000563109 MRPS9P82933 396 aaKnown RBP21.42■■□□□ 1.02
RAB40C-207ENST00000563109 PRAMEF19Q5SWL8 479 aa21.42■■□□□ 1.02
RAB40C-207ENST00000563109 SEPT14Q6ZU15 432 aa21.42■■□□□ 1.02
RAB40C-207ENST00000563109 NEK8Q86SG6 692 aa21.42■■□□□ 1.02
RAB40C-207ENST00000563109 ARMC5Q96C12 935 aa21.42■■□□□ 1.02
RAB40C-207ENST00000563109 KATNBL1Q9H079 304 aa21.42■■□□□ 1.02
RAB40C-207ENST00000563109 HMX1Q9NP08 348 aaPredicted RBP21.42■■□□□ 1.02
RAB40C-207ENST00000563109 RTEL1Q9NZ71 1219 aa21.42■■□□□ 1.02
RAB40C-207ENST00000563109 NOL7Q9UMY1 257 aaKnown RBP21.42■■□□□ 1.02
RAB40C-207ENST00000563109 KIF28PB7ZC32 967 aa21.41■■□□□ 1.02
RAB40C-207ENST00000563109 ZNF865P0CJ78 1059 aaPredicted RBP21.41■■□□□ 1.02
RAB40C-207ENST00000563109 AKR1A1P14550 325 aa21.41■■□□□ 1.02
RAB40C-207ENST00000563109 U2AF2P26368 475 aaKnown RBP eCLIP21.41■■□□□ 1.02
RAB40C-207ENST00000563109 SCFD2Q8WU76 684 aa21.41■■□□□ 1.02
RAB40C-207ENST00000563109 CRYGNQ8WXF5 182 aa21.41■■□□□ 1.02
RAB40C-207ENST00000563109 ZFP91Q96JP5 570 aaPredicted RBP21.41■■□□□ 1.02
RAB40C-207ENST00000563109 CDHR1Q96JP9 859 aa21.41■■□□□ 1.02
RAB40C-207ENST00000563109 INPP4AQ96PE3 977 aaPredicted RBP21.41■■□□□ 1.02
RAB40C-207ENST00000563109 FAM184BQ9ULE4 1060 aa21.41■■□□□ 1.02
RAB40C-207ENST00000563109 MRVI1Q9Y6F6 885 aa21.41■■□□□ 1.02
RAB40C-207ENST00000563109 FAM205CA6NFA0 338 aa21.4■■□□□ 1.02
RAB40C-207ENST00000563109 CCND3P30281 292 aaPredicted RBP21.4■■□□□ 1.02
RAB40C-207ENST00000563109 SETQ01105 290 aaPredicted RBP21.4■■□□□ 1.02
RAB40C-207ENST00000563109 TTLL4Q14679 1199 aa21.4■■□□□ 1.02
RAB40C-207ENST00000563109 LETM2Q2VYF4 491 aa21.4■■□□□ 1.02
RAB40C-207ENST00000563109 CEP55Q53EZ4 464 aa21.4■■□□□ 1.02
RAB40C-207ENST00000563109 EARS2Q5JPH6 523 aaKnown RBP21.4■■□□□ 1.02
RAB40C-207ENST00000563109 KCNV1Q6PIU1 500 aa21.4■■□□□ 1.02
RAB40C-207ENST00000563109 BRAPQ7Z569 592 aa21.4■■□□□ 1.02
RAB40C-207ENST00000563109 TRPV1Q8NER1 839 aa21.4■■□□□ 1.02
RAB40C-207ENST00000563109 GPRASP2Q96D09 838 aa21.4■■□□□ 1.02
RAB40C-207ENST00000563109 ZNF333Q96JL9 665 aa21.4■■□□□ 1.02
RAB40C-207ENST00000563109 MXRA8Q9BRK3 442 aa21.4■■□□□ 1.02
RAB40C-207ENST00000563109 MTMR6Q9Y217 621 aa21.4■■□□□ 1.02
RAB40C-207ENST00000563109 UBIAD1Q9Y5Z9 338 aa21.4■■□□□ 1.02
RAB40C-207ENST00000563109 SEPT4O43236 478 aa21.39■■□□□ 1.01
RAB40C-207ENST00000563109 FIBPO43427 364 aa21.39■■□□□ 1.01
RAB40C-207ENST00000563109 GCFC2P16383 781 aaKnown RBP21.39■■□□□ 1.01
RAB40C-207ENST00000563109 CIITAP33076 1130 aa21.39■■□□□ 1.01
RAB40C-207ENST00000563109 MTMR1Q13613 665 aa21.39■■□□□ 1.01
RAB40C-207ENST00000563109 CCDC144BQ3MJ40 725 aa21.39■■□□□ 1.01
RAB40C-207ENST00000563109 TAPT1Q6NXT6 567 aa21.39■■□□□ 1.01
RAB40C-207ENST00000563109 MOXD1Q6UVY6 613 aa21.39■■□□□ 1.01
RAB40C-207ENST00000563109 NIPA1Q7RTP0 329 aa21.39■■□□□ 1.01
RAB40C-207ENST00000563109 XRN2Q9H0D6 950 aaKnown RBP eCLIP21.39■■□□□ 1.012e-10■■■■□ 22.8
RAB40C-207ENST00000563109 JADE2Q9NQC1 790 aa21.39■■□□□ 1.01
RAB40C-207ENST00000563109 FRMPD3Q5JV73 1810 aa21.39■■□□□ 1.01
RAB40C-207ENST00000563109 RBM47A0AV96 593 aaKnown RBP21.38■■□□□ 1.01
RAB40C-207ENST00000563109 MSCO60682 206 aa21.38■■□□□ 1.01
RAB40C-207ENST00000563109 MYCP01106 439 aaPredicted RBP21.38■■□□□ 1.01
RAB40C-207ENST00000563109 CCL5P13501 91 aa21.38■■□□□ 1.01
RAB40C-207ENST00000563109 ADCYAP1R1P41586 468 aa21.38■■□□□ 1.01
RAB40C-207ENST00000563109 TRAPPC10P48553 1259 aa21.38■■□□□ 1.01
RAB40C-207ENST00000563109 IQSEC1Q6DN90 963 aa21.38■■□□□ 1.01
RAB40C-207ENST00000563109 FERMT3Q86UX7 667 aa21.38■■□□□ 1.01
RAB40C-207ENST00000563109 WDR11Q9BZH6 1224 aa21.38■■□□□ 1.01
RAB40C-207ENST00000563109 UNC93B1Q9H1C4 597 aa21.38■■□□□ 1.01
RAB40C-207ENST00000563109 PDGFCQ9NRA1 345 aa21.38■■□□□ 1.01
RAB40C-207ENST00000563109 CCNT1O60563 726 aaKnown RBP21.37■■□□□ 1.01
RAB40C-207ENST00000563109 RGS20O76081 388 aa21.37■■□□□ 1.01
RAB40C-207ENST00000563109 TXNP10599 105 aaKnown RBP21.37■■□□□ 1.01
RAB40C-207ENST00000563109 ITGB5P18084 799 aa21.37■■□□□ 1.01
RAB40C-207ENST00000563109 ICAM3P32942 547 aa21.37■■□□□ 1.01
RAB40C-207ENST00000563109 TNFAIP2Q03169 654 aa21.37■■□□□ 1.01
RAB40C-207ENST00000563109 PRR16Q569H4 304 aa21.37■■□□□ 1.01
RAB40C-207ENST00000563109 COL13A1Q5TAT6 717 aaPredicted RBP21.37■■□□□ 1.01
RAB40C-207ENST00000563109 PLA2G4DQ86XP0 818 aa21.37■■□□□ 1.01
RAB40C-207ENST00000563109 RNF208Q9H0X6 261 aa21.37■■□□□ 1.01
RAB40C-207ENST00000563109 ZSCAN16Q9H4T2 348 aaPredicted RBP21.37■■□□□ 1.01
RAB40C-207ENST00000563109 DDX20Q9UHI6 824 aaKnown RBP21.37■■□□□ 1.01
RAB40C-207ENST00000563109 DDX25Q9UHL0 483 aaKnown RBP21.37■■□□□ 1.01
RAB40C-207ENST00000563109 MYH15Q9Y2K3 1946 aa21.37■■□□□ 1.01
RAB40C-207ENST00000563109 SPATA31C2B4DYI2 1134 aa21.36■■□□□ 1.01
RAB40C-207ENST00000563109 FAM86B1E9PN63 330 aa21.36■■□□□ 1.01
RAB40C-207ENST00000563109 MEIS1O00470 390 aa21.36■■□□□ 1.01
RAB40C-207ENST00000563109 NKRFO15226 690 aaKnown RBP eCLIP21.36■■□□□ 1.01
RAB40C-207ENST00000563109 MAFGO15525 162 aa21.36■■□□□ 1.01
RAB40C-207ENST00000563109 TDP2O95551 362 aa21.36■■□□□ 1.01
RAB40C-207ENST00000563109 FAM86B2P0C5J1 330 aa21.36■■□□□ 1.01
RAB40C-207ENST00000563109 ZSCAN22P10073 491 aaPredicted RBP21.36■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms