RNA–Protein interactions for RNA: ENST00000562534.5

USB1-206, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 562 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-206ENST00000562534 SCFD2Q8WU76 684 aa18.69■□□□□ 0.58
USB1-206ENST00000562534 DEFB118Q96PH6 123 aa18.69■□□□□ 0.58
USB1-206ENST00000562534 GJB4Q9NTQ9 266 aa18.69■□□□□ 0.58
USB1-206ENST00000562534 DDX49Q9Y6V7 483 aaKnown RBP18.69■□□□□ 0.58
USB1-206ENST00000562534 M0R2N6 131 aa18.68■□□□□ 0.58
USB1-206ENST00000562534 MAFGO15525 162 aa18.68■□□□□ 0.58
USB1-206ENST00000562534 DUSP11O75319 330 aaKnown RBP18.68■□□□□ 0.58
USB1-206ENST00000562534 TFRCP02786 760 aaKnown RBP18.68■□□□□ 0.58
USB1-206ENST00000562534 RARBP10826 455 aa18.68■□□□□ 0.58
USB1-206ENST00000562534 KRT2P35908 639 aa18.68■□□□□ 0.58
USB1-206ENST00000562534 SREBF1P36956 1147 aa18.68■□□□□ 0.58
USB1-206ENST00000562534 GJA8P48165 433 aa18.68■□□□□ 0.58
USB1-206ENST00000562534 USP11P51784 963 aa18.68■□□□□ 0.58
USB1-206ENST00000562534 MRPS9P82933 396 aaKnown RBP18.68■□□□□ 0.58
USB1-206ENST00000562534 TTLL4Q14679 1199 aa18.68■□□□□ 0.58
USB1-206ENST00000562534 GNPTABQ3T906 1256 aa18.68■□□□□ 0.58
USB1-206ENST00000562534 LHX8Q68G74 356 aa18.68■□□□□ 0.58
USB1-206ENST00000562534 SEPT14Q6ZU15 432 aa18.68■□□□□ 0.58
USB1-206ENST00000562534 KRT25Q7Z3Z0 450 aa18.68■□□□□ 0.58
USB1-206ENST00000562534 NLRX1Q86UT6 975 aa18.68■□□□□ 0.58
USB1-206ENST00000562534 WDR11Q9BZH6 1224 aa18.68■□□□□ 0.58
USB1-206ENST00000562534 PDGFCQ9NRA1 345 aa18.68■□□□□ 0.58
USB1-206ENST00000562534 RTEL1Q9NZ71 1219 aa18.68■□□□□ 0.58
USB1-206ENST00000562534 Q9Y3F1 56 aa18.68■□□□□ 0.58
USB1-206ENST00000562534 ADAMTS3O15072 1205 aa18.67■□□□□ 0.58
USB1-206ENST00000562534 NKRFO15226 690 aaKnown RBP eCLIP18.67■□□□□ 0.58
USB1-206ENST00000562534 CYP3A4P08684 503 aa18.67■□□□□ 0.58
USB1-206ENST00000562534 ZNF76P36508 570 aa18.67■□□□□ 0.58
USB1-206ENST00000562534 ADCYAP1R1P41586 468 aa18.67■□□□□ 0.58
USB1-206ENST00000562534 ARHGAP4P98171 946 aa18.67■□□□□ 0.58
USB1-206ENST00000562534 IL31RAQ8NI17 732 aa18.67■□□□□ 0.58
USB1-206ENST00000562534 U2AF1L4Q8WU68 220 aaKnown RBP18.67■□□□□ 0.58
USB1-206ENST00000562534 PGBD1Q96JS3 809 aa18.67■□□□□ 0.58
USB1-206ENST00000562534 INPP4AQ96PE3 977 aaPredicted RBP18.67■□□□□ 0.58
USB1-206ENST00000562534 RBBP6Q7Z6E9 1792 aaKnown RBP18.67■□□□□ 0.58
USB1-206ENST00000562534 CCDC194A0A1B0GVG4 234 aa18.66■□□□□ 0.58
USB1-206ENST00000562534 HSP90AA1P07900 732 aaKnown RBP18.66■□□□□ 0.58
USB1-206ENST00000562534 TXNP10599 105 aaKnown RBP18.66■□□□□ 0.58
USB1-206ENST00000562534 NONOQ15233 471 aaKnown RBP eCLIP18.66■□□□□ 0.58
USB1-206ENST00000562534 DUSP28Q4G0W2 176 aa18.66■□□□□ 0.58
USB1-206ENST00000562534 LARP1BQ659C4 914 aaKnown RBP18.66■□□□□ 0.58
USB1-206ENST00000562534 ARRDC4Q8NCT1 418 aa18.66■□□□□ 0.58
USB1-206ENST00000562534 RASGRP4Q8TDF6 673 aa18.66■□□□□ 0.58
USB1-206ENST00000562534 CDHR1Q96JP9 859 aa18.66■□□□□ 0.58
USB1-206ENST00000562534 CRISPLD2Q9H0B8 497 aa18.66■□□□□ 0.58
USB1-206ENST00000562534 SPC25Q9HBM1 224 aa18.66■□□□□ 0.58
USB1-206ENST00000562534 OGDHLQ9ULD0 1010 aa18.66■□□□□ 0.58
USB1-206ENST00000562534 LCTP09848 1927 aa18.66■□□□□ 0.58
USB1-206ENST00000562534 BTBD18B2RXH4 712 aa18.65■□□□□ 0.58
USB1-206ENST00000562534 SPATA31C2B4DYI2 1134 aa18.65■□□□□ 0.58
USB1-206ENST00000562534 RGS20O76081 388 aa18.65■□□□□ 0.58
USB1-206ENST00000562534 SMPD1P17405 629 aa18.65■□□□□ 0.58
USB1-206ENST00000562534 PDCP20941 246 aa18.65■□□□□ 0.58
USB1-206ENST00000562534 ICAM3P32942 547 aa18.65■□□□□ 0.58
USB1-206ENST00000562534 FOSBP53539 338 aa18.65■□□□□ 0.58
USB1-206ENST00000562534 BECN1Q14457 450 aa18.65■□□□□ 0.58
USB1-206ENST00000562534 CEP55Q53EZ4 464 aa18.65■□□□□ 0.58
USB1-206ENST00000562534 CCDC62Q6P9F0 684 aa18.65■□□□□ 0.58
USB1-206ENST00000562534 DIS3L2Q8IYB7 885 aaKnown RBP18.65■□□□□ 0.58
USB1-206ENST00000562534 OXER1Q8TDS5 423 aa18.65■□□□□ 0.58
USB1-206ENST00000562534 TBCKQ8TEA7 893 aa18.65■□□□□ 0.58
USB1-206ENST00000562534 CRYGNQ8WXF5 182 aa18.65■□□□□ 0.58
USB1-206ENST00000562534 GPRASP2Q96D09 838 aa18.65■□□□□ 0.58
USB1-206ENST00000562534 MXRA8Q9BRK3 442 aa18.65■□□□□ 0.58
USB1-206ENST00000562534 AP5M1Q9H0R1 490 aa18.65■□□□□ 0.58
USB1-206ENST00000562534 JADE2Q9NQC1 790 aa18.65■□□□□ 0.58
USB1-206ENST00000562534 DDX41Q9UJV9 622 aaKnown RBP18.65■□□□□ 0.58
USB1-206ENST00000562534 UBIAD1Q9Y5Z9 338 aa18.65■□□□□ 0.58
USB1-206ENST00000562534 MRVI1Q9Y6F6 885 aa18.65■□□□□ 0.58
USB1-206ENST00000562534 C11orf97A0A1B0GVM6 126 aaPredicted RBP18.64■□□□□ 0.57
USB1-206ENST00000562534 H3BQV1 296 aa18.64■□□□□ 0.57
USB1-206ENST00000562534 FIBPO43427 364 aa18.64■□□□□ 0.57
USB1-206ENST00000562534 GUCY1B3Q02153 619 aa18.64■□□□□ 0.57
USB1-206ENST00000562534 IFFO2Q5TF58 517 aa18.64■□□□□ 0.57
USB1-206ENST00000562534 NIPA1Q7RTP0 329 aa18.64■□□□□ 0.57
USB1-206ENST00000562534 ZFP91Q96JP5 570 aaPredicted RBP18.64■□□□□ 0.57
USB1-206ENST00000562534 FOXP1Q9H334 677 aaPredicted RBP18.64■□□□□ 0.57
USB1-206ENST00000562534 XPNPEP3Q9NQH7 507 aa18.64■□□□□ 0.57
USB1-206ENST00000562534 GNEQ9Y223 722 aaKnown RBP18.64■□□□□ 0.57
USB1-206ENST00000562534 MEIS1O00470 390 aa18.63■□□□□ 0.57
USB1-206ENST00000562534 DYNC1LI2O43237 492 aaPredicted RBP18.63■□□□□ 0.57
USB1-206ENST00000562534 PDIA4P13667 645 aaKnown RBP18.63■□□□□ 0.57
USB1-206ENST00000562534 ITGB5P18084 799 aa18.63■□□□□ 0.57
USB1-206ENST00000562534 CIITAP33076 1130 aa18.63■□□□□ 0.57
USB1-206ENST00000562534 GJA9P57773 515 aa18.63■□□□□ 0.57
USB1-206ENST00000562534 GNL2Q13823 731 aaKnown RBP18.63■□□□□ 0.57
USB1-206ENST00000562534 ANO1Q5XXA6 986 aa18.63■□□□□ 0.57
USB1-206ENST00000562534 RNF180Q86T96 592 aa18.63■□□□□ 0.57
USB1-206ENST00000562534 ANKLE1Q8NAG6 615 aa18.63■□□□□ 0.57
USB1-206ENST00000562534 GIMAP8Q8ND71 665 aaPredicted RBP18.63■□□□□ 0.57
USB1-206ENST00000562534 NAP1L4Q99733 375 aaKnown RBP18.63■□□□□ 0.57
USB1-206ENST00000562534 SENP7Q9BQF6 1050 aa18.63■□□□□ 0.57
USB1-206ENST00000562534 MCM3APO60318 1980 aa18.62■□□□□ 0.57
USB1-206ENST00000562534 POTEFA5A3E0 1075 aa18.62■□□□□ 0.57
USB1-206ENST00000562534 NKX3-2P78367 333 aa18.62■□□□□ 0.57
USB1-206ENST00000562534 NR5A1Q13285 461 aa18.62■□□□□ 0.57
USB1-206ENST00000562534 MTMR1Q13613 665 aa18.62■□□□□ 0.57
USB1-206ENST00000562534 NEDD9Q14511 834 aa18.62■□□□□ 0.57
USB1-206ENST00000562534 LY6KQ17RY6 165 aa18.62■□□□□ 0.57
USB1-206ENST00000562534 PIK3AP1Q6ZUJ8 805 aa18.62■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms