RNA–Protein interactions for RNA: ENST00000562474.1

TSC2-218, Transcript of TSC complex subunit 2, humanhuman

TSL 5

Gene TSC2, Length 589 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC2-218ENST00000562474 LIMCH1Q9UPQ0 1083 aa12.87□□□□□ -0.35
TSC2-218ENST00000562474 CEP290O15078 2479 aa12.87□□□□□ -0.35
TSC2-218ENST00000562474 PIK3CDO00329 1044 aa12.86□□□□□ -0.35
TSC2-218ENST00000562474 CTAGE5O15320 804 aa12.86□□□□□ -0.35
TSC2-218ENST00000562474 MSCO60682 206 aa12.86□□□□□ -0.35
TSC2-218ENST00000562474 DEXIO95424 95 aa12.86□□□□□ -0.35
TSC2-218ENST00000562474 TXNP10599 105 aaKnown RBP12.86□□□□□ -0.35
TSC2-218ENST00000562474 CCND2P30279 289 aa12.86□□□□□ -0.35
TSC2-218ENST00000562474 NLRP5P59047 1200 aa12.86□□□□□ -0.35
TSC2-218ENST00000562474 GUCY1B3Q02153 619 aa12.86□□□□□ -0.35
TSC2-218ENST00000562474 MLLT1Q03111 559 aaPredicted RBP12.86□□□□□ -0.35
TSC2-218ENST00000562474 PPP1R18Q6NYC8 613 aa12.86□□□□□ -0.35
TSC2-218ENST00000562474 OR6J1Q8NGC5 347 aa12.86□□□□□ -0.35
TSC2-218ENST00000562474 ALG1Q9BT22 464 aa12.86□□□□□ -0.35
TSC2-218ENST00000562474 SENP6Q9GZR1 1112 aaPredicted RBP12.86□□□□□ -0.35
TSC2-218ENST00000562474 C11orf49Q9H6J7 331 aa12.86□□□□□ -0.35
TSC2-218ENST00000562474 GNEQ9Y223 722 aaKnown RBP12.86□□□□□ -0.35
TSC2-218ENST00000562474 TELO2Q9Y4R8 837 aa12.86□□□□□ -0.35
TSC2-218ENST00000562474 SCN10AQ9Y5Y9 1956 aa12.86□□□□□ -0.35
TSC2-218ENST00000562474 FRMPD4Q14CM0 1322 aa12.86□□□□□ -0.35
TSC2-218ENST00000562474 KBTBD13C9JR72 458 aa12.85□□□□□ -0.35
TSC2-218ENST00000562474 hCG_1984214I3L0E3 225 aa12.85□□□□□ -0.35
TSC2-218ENST00000562474 DUSP11O75319 330 aaKnown RBP12.85□□□□□ -0.35
TSC2-218ENST00000562474 CDKL5O76039 1030 aa12.85□□□□□ -0.35
TSC2-218ENST00000562474 RGS19P49795 217 aa12.85□□□□□ -0.35
TSC2-218ENST00000562474 MRPL12P52815 198 aaKnown RBP12.85□□□□□ -0.35
TSC2-218ENST00000562474 SP4Q02446 784 aa12.85□□□□□ -0.35
TSC2-218ENST00000562474 SEMA3FQ13275 785 aa12.85□□□□□ -0.35
TSC2-218ENST00000562474 UBE2Q1Q7Z7E8 422 aa12.85□□□□□ -0.35
TSC2-218ENST00000562474 VSIG10LQ86VR7 867 aa12.85□□□□□ -0.35
TSC2-218ENST00000562474 ZNF713Q8N859 430 aaPredicted RBP12.85□□□□□ -0.35
TSC2-218ENST00000562474 CYP2W1Q8TAV3 490 aa12.85□□□□□ -0.35
TSC2-218ENST00000562474 IWS1Q96ST2 819 aa12.85□□□□□ -0.35
TSC2-218ENST00000562474 MPHOSPH6Q99547 160 aaKnown RBP12.85□□□□□ -0.35
TSC2-218ENST00000562474 ZMYND12Q9H0C1 365 aa12.85□□□□□ -0.35
TSC2-218ENST00000562474 MRVI1Q9Y6F6 885 aa12.85□□□□□ -0.35
TSC2-218ENST00000562474 STK36Q9NRP7 1315 aa12.85□□□□□ -0.35
TSC2-218ENST00000562474 RBM47A0AV96 593 aaKnown RBP12.84□□□□□ -0.35
TSC2-218ENST00000562474 FAM205CA6NFA0 338 aa12.84□□□□□ -0.35
TSC2-218ENST00000562474 B4DLN1 442 aa12.84□□□□□ -0.35
TSC2-218ENST00000562474 ST18O60284 1047 aa12.84□□□□□ -0.35
TSC2-218ENST00000562474 CLK2P49760 499 aaKnown RBP12.84□□□□□ -0.35
TSC2-218ENST00000562474 CHMP4BP1P59074 171 aa12.84□□□□□ -0.35
TSC2-218ENST00000562474 SP2Q02086 613 aa12.84□□□□□ -0.35
TSC2-218ENST00000562474 TTLL4Q14679 1199 aa12.84□□□□□ -0.35
TSC2-218ENST00000562474 NPY5RQ15761 445 aa12.84□□□□□ -0.35
TSC2-218ENST00000562474 KCNA10Q16322 511 aa12.84□□□□□ -0.35
TSC2-218ENST00000562474 DUSP28Q4G0W2 176 aa12.84□□□□□ -0.35
TSC2-218ENST00000562474 GNASQ5JWF2 1037 aa12.84□□□□□ -0.35
TSC2-218ENST00000562474 IQSEC1Q6DN90 963 aa12.84□□□□□ -0.35
TSC2-218ENST00000562474 NECAB2Q7Z6G3 386 aa12.84□□□□□ -0.35
TSC2-218ENST00000562474 REXO1Q8N1G1 1221 aaKnown RBP12.84□□□□□ -0.35
TSC2-218ENST00000562474 CCDC148Q8NFR7 591 aa12.84□□□□□ -0.35
TSC2-218ENST00000562474 OXER1Q8TDS5 423 aa12.84□□□□□ -0.35
TSC2-218ENST00000562474 SCFD2Q8WU76 684 aa12.84□□□□□ -0.35
TSC2-218ENST00000562474 AP5M1Q9H0R1 490 aa12.84□□□□□ -0.35
TSC2-218ENST00000562474 C6orf50Q9HD87 102 aa12.84□□□□□ -0.35
TSC2-218ENST00000562474 MAP3K20Q9NYL2 800 aaKnown RBP12.84□□□□□ -0.35
TSC2-218ENST00000562474 RBM27Q9P2N5 1060 aaKnown RBP12.84□□□□□ -0.35
TSC2-218ENST00000562474 MKI67P46013 3256 aaKnown RBP12.84□□□□□ -0.35
TSC2-218ENST00000562474 SCN5AQ14524 2016 aa12.83□□□□□ -0.36
TSC2-218ENST00000562474 ESYT2A0FGR8 921 aa12.83□□□□□ -0.36
TSC2-218ENST00000562474 DNM1LO00429 736 aa12.83□□□□□ -0.36
TSC2-218ENST00000562474 EIF3JO75822 258 aaKnown RBP12.83□□□□□ -0.36
TSC2-218ENST00000562474 MYL3P08590 195 aa12.83□□□□□ -0.36
TSC2-218ENST00000562474 UBA1P22314 1058 aaKnown RBP12.83□□□□□ -0.36
TSC2-218ENST00000562474 GJA9P57773 515 aa12.83□□□□□ -0.36
TSC2-218ENST00000562474 PSMC6P62333 389 aa12.83□□□□□ -0.36
TSC2-218ENST00000562474 LRRC26Q2I0M4 334 aa12.83□□□□□ -0.36
TSC2-218ENST00000562474 CCDC62Q6P9F0 684 aa12.83□□□□□ -0.36
TSC2-218ENST00000562474 CXCL17Q6UXB2 119 aa12.83□□□□□ -0.36
TSC2-218ENST00000562474 RNF180Q86T96 592 aa12.83□□□□□ -0.36
TSC2-218ENST00000562474 ARRDC4Q8NCT1 418 aa12.83□□□□□ -0.36
TSC2-218ENST00000562474 KLHDC9Q8NEP7 349 aa12.83□□□□□ -0.36
TSC2-218ENST00000562474 AFG1LQ8WV93 481 aa12.83□□□□□ -0.36
TSC2-218ENST00000562474 TMX3Q96JJ7 454 aa12.83□□□□□ -0.36
TSC2-218ENST00000562474 UPF3AQ9H1J1 476 aaKnown RBP12.83□□□□□ -0.36
TSC2-218ENST00000562474 FOXD4L1Q9NU39 408 aa12.83□□□□□ -0.36
TSC2-218ENST00000562474 DDX41Q9UJV9 622 aaKnown RBP12.83□□□□□ -0.36
TSC2-218ENST00000562474 TNRC18O15417 2968 aaPredicted RBP12.83□□□□□ -0.36
TSC2-218ENST00000562474 LTBP2Q14767 1821 aa12.83□□□□□ -0.36
TSC2-218ENST00000562474 EVPLQ92817 2033 aa12.83□□□□□ -0.36
TSC2-218ENST00000562474 LOXHD1Q8IVV2 1947 aa12.82□□□□□ -0.36
TSC2-218ENST00000562474 LOC102724159A0A0B4J2E5 919 aa12.82□□□□□ -0.36
TSC2-218ENST00000562474 A0A1W2PQ45 241 aaPredicted RBP12.82□□□□□ -0.36
TSC2-218ENST00000562474 A0A1W2PQY0 241 aa12.82□□□□□ -0.36
TSC2-218ENST00000562474 GGPS1O95749 300 aa12.82□□□□□ -0.36
TSC2-218ENST00000562474 ASGR1P07306 291 aa12.82□□□□□ -0.36
TSC2-218ENST00000562474 COL6A1P12109 1028 aa12.82□□□□□ -0.36
TSC2-218ENST00000562474 ITGB5P18084 799 aa12.82□□□□□ -0.36
TSC2-218ENST00000562474 ACLYP53396 1101 aa12.82□□□□□ -0.36
TSC2-218ENST00000562474 ARHGAP4P98171 946 aa12.82□□□□□ -0.36
TSC2-218ENST00000562474 ARHGAP1Q07960 439 aa12.82□□□□□ -0.36
TSC2-218ENST00000562474 PWP2Q15269 919 aaKnown RBP12.82□□□□□ -0.36
TSC2-218ENST00000562474 FSCN1Q16658 493 aaKnown RBP12.82□□□□□ -0.36
TSC2-218ENST00000562474 EARS2Q5JPH6 523 aaKnown RBP12.82□□□□□ -0.36
TSC2-218ENST00000562474 PCNX4Q63HM2 1172 aa12.82□□□□□ -0.36
TSC2-218ENST00000562474 CCSAPQ6IQ19 270 aaPredicted RBP12.82□□□□□ -0.36
TSC2-218ENST00000562474 C7orf61Q8IZ16 206 aa12.82□□□□□ -0.36
TSC2-218ENST00000562474 BLIDQ8IZY5 108 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms