RNA–Protein interactions for RNA: ENST00000562389.5

CLK3-207, Transcript of CDC like kinase 3, humanhuman

TSL 4

Gene CLK3, Length 572 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-207ENST00000562389 C11orf49Q9H6J7 331 aa19.18■□□□□ 0.66
CLK3-207ENST00000562389 KBTBD13C9JR72 458 aa19.17■□□□□ 0.66
CLK3-207ENST00000562389 STAM2O75886 525 aa19.17■□□□□ 0.66
CLK3-207ENST00000562389 GNA11P29992 359 aa19.17■□□□□ 0.66
CLK3-207ENST00000562389 ST3GAL1Q11201 340 aa19.17■□□□□ 0.66
CLK3-207ENST00000562389 AP3B2Q13367 1082 aa19.17■□□□□ 0.66
CLK3-207ENST00000562389 TTLL4Q14679 1199 aa19.17■□□□□ 0.66
CLK3-207ENST00000562389 PCNX4Q63HM2 1172 aa19.17■□□□□ 0.66
CLK3-207ENST00000562389 XRRA1Q6P2D8 792 aa19.17■□□□□ 0.66
CLK3-207ENST00000562389 TLK2Q86UE8 772 aa19.17■□□□□ 0.66
CLK3-207ENST00000562389 KLHDC9Q8NEP7 349 aa19.17■□□□□ 0.66
CLK3-207ENST00000562389 ZSCAN31Q96LW9 406 aaPredicted RBP19.17■□□□□ 0.66
CLK3-207ENST00000562389 EHMT1Q9H9B1 1298 aa19.17■□□□□ 0.66
CLK3-207ENST00000562389 SPC25Q9HBM1 224 aa19.17■□□□□ 0.66
CLK3-207ENST00000562389 C6orf50Q9HD87 102 aa19.17■□□□□ 0.66
CLK3-207ENST00000562389 SH2B1Q9NRF2 756 aaPredicted RBP19.17■□□□□ 0.66
CLK3-207ENST00000562389 VPS54Q9P1Q0 977 aa19.17■□□□□ 0.66
CLK3-207ENST00000562389 PCDHA6Q9UN73 950 aa19.17■□□□□ 0.66
CLK3-207ENST00000562389 PCDHA8Q9Y5H6 950 aa19.17■□□□□ 0.66
CLK3-207ENST00000562389 ALPK3Q96L96 1907 aa19.16■□□□□ 0.66
CLK3-207ENST00000562389 RGS20O76081 388 aa19.16■□□□□ 0.66
CLK3-207ENST00000562389 FOSP01100 380 aaPredicted RBP19.16■□□□□ 0.66
CLK3-207ENST00000562389 TMEM63BQ5T3F8 832 aa19.16■□□□□ 0.66
CLK3-207ENST00000562389 SEPT14Q6ZU15 432 aa19.16■□□□□ 0.66
CLK3-207ENST00000562389 NSUN7Q8NE18 718 aaKnown RBP19.16■□□□□ 0.66
CLK3-207ENST00000562389 TSEN34Q9BSV6 310 aaKnown RBP19.16■□□□□ 0.66
CLK3-207ENST00000562389 MYADML2A6NDP7 307 aa19.15■□□□□ 0.66
CLK3-207ENST00000562389 CTAGE5O15320 804 aa19.15■□□□□ 0.66
CLK3-207ENST00000562389 ARIH2O95376 493 aa19.15■□□□□ 0.66
CLK3-207ENST00000562389 C6orf222P0C671 652 aaPredicted RBP19.15■□□□□ 0.66
CLK3-207ENST00000562389 TXNP10599 105 aaKnown RBP19.15■□□□□ 0.66
CLK3-207ENST00000562389 MRPS9P82933 396 aaKnown RBP19.15■□□□□ 0.66
CLK3-207ENST00000562389 MCTP2Q6DN12 878 aa19.15■□□□□ 0.66
CLK3-207ENST00000562389 CCSAPQ6IQ19 270 aaPredicted RBP19.15■□□□□ 0.66
CLK3-207ENST00000562389 CCDC62Q6P9F0 684 aa19.15■□□□□ 0.66
CLK3-207ENST00000562389 BICD2Q8TD16 824 aa19.15■□□□□ 0.66
CLK3-207ENST00000562389 ANO3Q9BYT9 981 aa19.15■□□□□ 0.66
CLK3-207ENST00000562389 AP5M1Q9H0R1 490 aa19.15■□□□□ 0.66
CLK3-207ENST00000562389 PHF24Q9UPV7 400 aa19.15■□□□□ 0.66
CLK3-207ENST00000562389 DYNC1LI2O43237 492 aaPredicted RBP19.14■□□□□ 0.65
CLK3-207ENST00000562389 MYCNP04198 464 aaPredicted RBP19.14■□□□□ 0.65
CLK3-207ENST00000562389 PTGS1P23219 599 aa19.14■□□□□ 0.65
CLK3-207ENST00000562389 KCNV1Q6PIU1 500 aa19.14■□□□□ 0.65
CLK3-207ENST00000562389 REXO1Q8N1G1 1221 aaKnown RBP19.14■□□□□ 0.65
CLK3-207ENST00000562389 PCSK9Q8NBP7 692 aaKnown RBP19.14■□□□□ 0.65
CLK3-207ENST00000562389 WASF1Q92558 559 aa19.14■□□□□ 0.65
CLK3-207ENST00000562389 AIFM3Q96NN9 605 aa19.14■□□□□ 0.65
CLK3-207ENST00000562389 INPP4AQ96PE3 977 aaPredicted RBP19.14■□□□□ 0.65
CLK3-207ENST00000562389 HTATIP2Q9BUP3 242 aa19.14■□□□□ 0.65
CLK3-207ENST00000562389 ORC3Q9UBD5 711 aaPredicted RBP19.14■□□□□ 0.65
CLK3-207ENST00000562389 MRVI1Q9Y6F6 885 aa19.14■□□□□ 0.65
CLK3-207ENST00000562389 MOXD2PA6NHM9 499 aa19.13■□□□□ 0.65
CLK3-207ENST00000562389 FDPSP14324 419 aaKnown RBP19.13■□□□□ 0.65
CLK3-207ENST00000562389 ICAM3P32942 547 aa19.13■□□□□ 0.65
CLK3-207ENST00000562389 NLRP5P59047 1200 aa19.13■□□□□ 0.65
CLK3-207ENST00000562389 GNPTABQ3T906 1256 aa19.13■□□□□ 0.65
CLK3-207ENST00000562389 CCDC83Q8IWF9 413 aa19.13■□□□□ 0.65
CLK3-207ENST00000562389 DAGLBQ8NCG7 672 aa19.13■□□□□ 0.65
CLK3-207ENST00000562389 OR6J1Q8NGC5 347 aa19.13■□□□□ 0.65
CLK3-207ENST00000562389 PGBD1Q96JS3 809 aa19.13■□□□□ 0.65
CLK3-207ENST00000562389 LLPHQ9BRT6 129 aaKnown RBP19.13■□□□□ 0.65
CLK3-207ENST00000562389 TMEM260Q9NX78 707 aa19.13■□□□□ 0.65
CLK3-207ENST00000562389 DDX41Q9UJV9 622 aaKnown RBP19.13■□□□□ 0.65
CLK3-207ENST00000562389 MYH7BA7E2Y1 1941 aa19.13■□□□□ 0.65
CLK3-207ENST00000562389 ADAMTS3O15072 1205 aa19.12■□□□□ 0.65
CLK3-207ENST00000562389 TGFB3P10600 412 aa19.12■□□□□ 0.65
CLK3-207ENST00000562389 XBP1P17861 261 aa19.12■□□□□ 0.65
CLK3-207ENST00000562389 SREBF1P36956 1147 aa19.12■□□□□ 0.65
CLK3-207ENST00000562389 MCM2P49736 904 aa19.12■□□□□ 0.65
CLK3-207ENST00000562389 IRX5P78411 483 aaPredicted RBP19.12■□□□□ 0.65
CLK3-207ENST00000562389 KCNA10Q16322 511 aa19.12■□□□□ 0.65
CLK3-207ENST00000562389 FSCN1Q16658 493 aaKnown RBP19.12■□□□□ 0.65
CLK3-207ENST00000562389 LY6KQ17RY6 165 aa19.12■□□□□ 0.65
CLK3-207ENST00000562389 GNASQ5JWF2 1037 aa19.12■□□□□ 0.65
CLK3-207ENST00000562389 JAKMIP3Q5VZ66 844 aa19.12■□□□□ 0.65
CLK3-207ENST00000562389 GALNT17Q6IS24 598 aa19.12■□□□□ 0.65
CLK3-207ENST00000562389 COPS5Q92905 334 aa19.12■□□□□ 0.65
CLK3-207ENST00000562389 ZFP91Q96JP5 570 aaPredicted RBP19.12■□□□□ 0.65
CLK3-207ENST00000562389 SENP6Q9GZR1 1112 aaPredicted RBP19.12■□□□□ 0.65
CLK3-207ENST00000562389 PCDHA4Q9UN74 947 aa19.12■□□□□ 0.65
CLK3-207ENST00000562389 A0A1W2PQ45 241 aaPredicted RBP19.11■□□□□ 0.65
CLK3-207ENST00000562389 A0A1W2PQY0 241 aa19.11■□□□□ 0.65
CLK3-207ENST00000562389 ZEB2O60315 1214 aa19.11■□□□□ 0.65
CLK3-207ENST00000562389 JAK2O60674 1132 aa19.11■□□□□ 0.65
CLK3-207ENST00000562389 CD2BP2O95400 341 aaKnown RBP19.11■□□□□ 0.65
CLK3-207ENST00000562389 GH1P01241 217 aa19.11■□□□□ 0.65
CLK3-207ENST00000562389 ACLYP53396 1101 aa19.11■□□□□ 0.65
CLK3-207ENST00000562389 BEX3Q00994 111 aa19.11■□□□□ 0.65
CLK3-207ENST00000562389 NLRX1Q86UT6 975 aa19.11■□□□□ 0.65
CLK3-207ENST00000562389 EMID1Q96A84 441 aaPredicted RBP19.11■□□□□ 0.65
CLK3-207ENST00000562389 GPRASP2Q96D09 838 aa19.11■□□□□ 0.65
CLK3-207ENST00000562389 ALG1Q9BT22 464 aa19.11■□□□□ 0.65
CLK3-207ENST00000562389 PHF20Q9BVI0 1012 aa19.11■□□□□ 0.65
CLK3-207ENST00000562389 RTEL1Q9NZ71 1219 aa19.11■□□□□ 0.65
CLK3-207ENST00000562389 UBIAD1Q9Y5Z9 338 aa19.11■□□□□ 0.65
CLK3-207ENST00000562389 MKI67P46013 3256 aaKnown RBP19.1■□□□□ 0.65
CLK3-207ENST00000562389 SPATA31C2B4DYI2 1134 aa19.1■□□□□ 0.65
CLK3-207ENST00000562389 FIBPO43427 364 aa19.1■□□□□ 0.65
CLK3-207ENST00000562389 DTNBO60941 627 aa19.1■□□□□ 0.65
CLK3-207ENST00000562389 ASGR1P07306 291 aa19.1■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms