RNA–Protein interactions for RNA: ENST00000562303.5

RPAP1-204, Transcript of RNA polymerase II associated protein 1, humanhuman

TSL 1 (best)

Gene RPAP1, Length 5,897 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1-204ENST00000562303 CDHR1Q96JP9 859 aa12.22□□□□□ -0.45
RPAP1-204ENST00000562303 NXF1Q9UBU9 619 aaKnown RBP12.22□□□□□ -0.45
RPAP1-204ENST00000562303 M0R2C6 588 aa12.22□□□□□ -0.45
RPAP1-204ENST00000562303 CPP00450 1065 aa12.22□□□□□ -0.45
RPAP1-204ENST00000562303 TCP1P17987 556 aaKnown RBP12.22□□□□□ -0.45
RPAP1-204ENST00000562303 CMA1P23946 247 aa12.22□□□□□ -0.45
RPAP1-204ENST00000562303 MAPK4P31152 587 aa12.22□□□□□ -0.45
RPAP1-204ENST00000562303 SERPINB6P35237 376 aa12.22□□□□□ -0.45
RPAP1-204ENST00000562303 OSTNP61366 133 aa12.22□□□□□ -0.45
RPAP1-204ENST00000562303 GNGT1P63211 74 aa12.22□□□□□ -0.45
RPAP1-204ENST00000562303 MYO1EQ12965 1108 aa12.22□□□□□ -0.45
RPAP1-204ENST00000562303 TMC4Q7Z404 712 aa12.22□□□□□ -0.45
RPAP1-204ENST00000562303 RNF139Q8WU17 664 aa12.22□□□□□ -0.45
RPAP1-204ENST00000562303 LARP4BQ92615 738 aaKnown RBP12.22□□□□□ -0.45
RPAP1-204ENST00000562303 CNOT6LQ96LI5 555 aaKnown RBP12.22□□□□□ -0.45
RPAP1-204ENST00000562303 WDR11Q9BZH6 1224 aa12.22□□□□□ -0.45
RPAP1-204ENST00000562303 NR2F2P24468 414 aa12.22□□□□□ -0.45
RPAP1-204ENST00000562303 MTERF2Q49AM1 385 aa12.22□□□□□ -0.45
RPAP1-204ENST00000562303 LARP7Q4G0J3 582 aaKnown RBP eCLIP12.22□□□□□ -0.45
RPAP1-204ENST00000562303 RUNDC3BQ96NL0 473 aa12.22□□□□□ -0.45
RPAP1-204ENST00000562303 GBP5Q96PP8 586 aa12.22□□□□□ -0.45
RPAP1-204ENST00000562303 PCIF1Q9H4Z3 704 aa12.22□□□□□ -0.45
RPAP1-204ENST00000562303 Q9H521 79 aa12.22□□□□□ -0.45
RPAP1-204ENST00000562303 PCDHA4Q9UN74 947 aa12.22□□□□□ -0.45
RPAP1-204ENST00000562303 ATF5Q9Y2D1 282 aaPredicted RBP12.22□□□□□ -0.45
RPAP1-204ENST00000562303 GOLGA8KD6RF30 607 aa12.22□□□□□ -0.45
RPAP1-204ENST00000562303 OPHN1O60890 802 aa12.22□□□□□ -0.45
RPAP1-204ENST00000562303 PPFIA2O75334 1257 aa12.22□□□□□ -0.45
RPAP1-204ENST00000562303 BMP3P12645 472 aa12.22□□□□□ -0.45
RPAP1-204ENST00000562303 SLITRK6Q9H5Y7 841 aa12.22□□□□□ -0.45
RPAP1-204ENST00000562303 KANSL2Q9H9L4 492 aa12.22□□□□□ -0.45
RPAP1-204ENST00000562303 GOLGA8QA0A0J9YX86 632 aa12.22□□□□□ -0.45
RPAP1-204ENST00000562303 GOLGA8OA6NCC3 632 aa12.22□□□□□ -0.45
RPAP1-204ENST00000562303 GOLGA8NF8WBI6 632 aa12.22□□□□□ -0.45
RPAP1-204ENST00000562303 MED7O43513 233 aa12.22□□□□□ -0.45
RPAP1-204ENST00000562303 PDE8BO95263 885 aa12.22□□□□□ -0.45
RPAP1-204ENST00000562303 SPATA1Q5VX52 437 aa12.22□□□□□ -0.45
RPAP1-204ENST00000562303 SLC10A4Q96EP9 437 aa12.22□□□□□ -0.45
RPAP1-204ENST00000562303 MAGEF1Q9HAY2 307 aa12.22□□□□□ -0.45
RPAP1-204ENST00000562303 GNGT2O14610 69 aa12.21□□□□□ -0.45
RPAP1-204ENST00000562303 FMNL1O95466 1100 aaPredicted RBP12.21□□□□□ -0.45
RPAP1-204ENST00000562303 STAT2P52630 851 aa12.21□□□□□ -0.45
RPAP1-204ENST00000562303 RASSF7Q02833 373 aa12.21□□□□□ -0.45
RPAP1-204ENST00000562303 UBE3CQ15386 1083 aa12.21□□□□□ -0.45
RPAP1-204ENST00000562303 EHHADHQ08426 723 aa12.21□□□□□ -0.45
RPAP1-204ENST00000562303 ARHGEF18Q6ZSZ5 1173 aa12.21□□□□□ -0.45
RPAP1-204ENST00000562303 FAM186BQ8IYM0 893 aa12.21□□□□□ -0.45
RPAP1-204ENST00000562303 STK17AQ9UEE5 414 aa12.21□□□□□ -0.45
RPAP1-204ENST00000562303 POLIQ9UNA4 740 aa12.21□□□□□ -0.45
RPAP1-204ENST00000562303 FAN1Q9Y2M0 1017 aa12.21□□□□□ -0.45
RPAP1-204ENST00000562303 SPECC1L-ADORA2AF8WAN1 911 aa12.21□□□□□ -0.45
RPAP1-204ENST00000562303 KRT1P04264 644 aa12.21□□□□□ -0.45
RPAP1-204ENST00000562303 ATP1A2P50993 1020 aa12.21□□□□□ -0.45
RPAP1-204ENST00000562303 CACNB1Q02641 598 aaPredicted RBP12.21□□□□□ -0.45
RPAP1-204ENST00000562303 DALRD3Q5D0E6 543 aaKnown RBP12.21□□□□□ -0.45
RPAP1-204ENST00000562303 OR6B2Q6IFH4 312 aa12.21□□□□□ -0.45
RPAP1-204ENST00000562303 FGD4Q96M96 766 aa12.21□□□□□ -0.45
RPAP1-204ENST00000562303 LAD1O00515 517 aa12.21□□□□□ -0.46
RPAP1-204ENST00000562303 MCF2LO15068 1137 aa12.21□□□□□ -0.46
RPAP1-204ENST00000562303 DSTYKQ6XUX3 929 aa12.21□□□□□ -0.46
RPAP1-204ENST00000562303 ANKRD13CQ8N6S4 541 aa12.21□□□□□ -0.46
RPAP1-204ENST00000562303 HAUS4Q9H6D7 363 aa12.21□□□□□ -0.46
RPAP1-204ENST00000562303 PALD1Q9ULE6 856 aa12.21□□□□□ -0.46
RPAP1-204ENST00000562303 PPP2R2CQ9Y2T4 447 aa12.21□□□□□ -0.46
RPAP1-204ENST00000562303 AFPP02771 609 aaKnown RBP12.21□□□□□ -0.46
RPAP1-204ENST00000562303 MYL3P08590 195 aa12.21□□□□□ -0.46
RPAP1-204ENST00000562303 EEF1GP26641 437 aaKnown RBP12.21□□□□□ -0.46
RPAP1-204ENST00000562303 DYNLT1P63172 113 aa12.21□□□□□ -0.46
RPAP1-204ENST00000562303 FANCLQ9NW38 375 aa12.21□□□□□ -0.46
RPAP1-204ENST00000562303 ADCY9O60503 1353 aa12.21□□□□□ -0.46
RPAP1-204ENST00000562303 ADORA1P30542 326 aa12.2□□□□□ -0.46
RPAP1-204ENST00000562303 PHEXP78562 749 aa12.2□□□□□ -0.46
RPAP1-204ENST00000562303 BRD3Q15059 726 aa12.2□□□□□ -0.46
RPAP1-204ENST00000562303 HP1BP3Q5SSJ5 553 aaPredicted RBP12.2□□□□□ -0.46
RPAP1-204ENST00000562303 SYDE2Q5VT97 1194 aa12.2□□□□□ -0.46
RPAP1-204ENST00000562303 MIGA2Q7L4E1 593 aa12.2□□□□□ -0.46
RPAP1-204ENST00000562303 FIS1Q9Y3D6 152 aa12.2□□□□□ -0.46
RPAP1-204ENST00000562303 GSTA4O15217 222 aa12.2□□□□□ -0.46
RPAP1-204ENST00000562303 COBLO75128 1261 aa12.2□□□□□ -0.46
RPAP1-204ENST00000562303 BBOX1O75936 387 aa12.2□□□□□ -0.46
RPAP1-204ENST00000562303 SOX5P35711 763 aa12.2□□□□□ -0.46
RPAP1-204ENST00000562303 SESN3P58005 492 aa12.2□□□□□ -0.46
RPAP1-204ENST00000562303 DYNLL1P63167 89 aaKnown RBP12.2□□□□□ -0.46
RPAP1-204ENST00000562303 ERFEQ4G0M1 354 aa12.2□□□□□ -0.46
RPAP1-204ENST00000562303 RASGRP4Q8TDF6 673 aa12.2□□□□□ -0.46
RPAP1-204ENST00000562303 WHAMMQ8TF30 809 aa12.2□□□□□ -0.46
RPAP1-204ENST00000562303 EEF2KMTQ96G04 330 aa12.2□□□□□ -0.46
RPAP1-204ENST00000562303 TMEM206Q9H813 350 aa12.2□□□□□ -0.46
RPAP1-204ENST00000562303 KIAA0232Q92628 1395 aa12.2□□□□□ -0.46
RPAP1-204ENST00000562303 PSAPP07602 524 aa12.2□□□□□ -0.46
RPAP1-204ENST00000562303 COPB1P53618 953 aaKnown RBP12.2□□□□□ -0.46
RPAP1-204ENST00000562303 DARS2Q6PI48 645 aaKnown RBP12.2□□□□□ -0.46
RPAP1-204ENST00000562303 CDC26Q8NHZ8 85 aa12.2□□□□□ -0.46
RPAP1-204ENST00000562303 MAGOHBQ96A72 148 aaKnown RBP12.2□□□□□ -0.46
RPAP1-204ENST00000562303 CLIC4Q9Y696 253 aa12.2□□□□□ -0.46
RPAP1-204ENST00000562303 ERBB4Q15303 1308 aa12.2□□□□□ -0.46
RPAP1-204ENST00000562303 UBN2Q6ZU65 1347 aa12.2□□□□□ -0.46
RPAP1-204ENST00000562303 CLIC2O15247 247 aa12.2□□□□□ -0.46
RPAP1-204ENST00000562303 SNX1Q13596 522 aa12.2□□□□□ -0.46
RPAP1-204ENST00000562303 LRRC41Q15345 812 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms