RNA–Protein interactions for RNA: ENST00000561940.1

SMG1-204, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 964 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-204ENST00000561940 CYBBP04839 570 aa9.01□□□□□ -0.97
SMG1-204ENST00000561940 SCG5P05408 212 aa9.01□□□□□ -0.97
SMG1-204ENST00000561940 GLDCP23378 1020 aa9.01□□□□□ -0.97
SMG1-204ENST00000561940 NR1I3Q14994 352 aa9.01□□□□□ -0.97
SMG1-204ENST00000561940 PLEKHN1Q494U1 663 aaPredicted RBP9.01□□□□□ -0.97
SMG1-204ENST00000561940 ZC3H12BQ5HYM0 836 aaKnown RBP9.01□□□□□ -0.97
SMG1-204ENST00000561940 RNF187Q5TA31 235 aaPredicted RBP9.01□□□□□ -0.97
SMG1-204ENST00000561940 CLUHP3Q96NS8 147 aa9.01□□□□□ -0.97
SMG1-204ENST00000561940 BCAS3Q9H6U6 928 aa9.01□□□□□ -0.97
SMG1-204ENST00000561940 PLA2G2DQ9UNK4 145 aa9.01□□□□□ -0.97
SMG1-204ENST00000561940 SEMA7AO75326 666 aa9□□□□□ -0.97
SMG1-204ENST00000561940 NTRK1P04629 796 aa9□□□□□ -0.97
SMG1-204ENST00000561940 GLI4P10075 376 aa9□□□□□ -0.97
SMG1-204ENST00000561940 CDR1P51861 262 aa9□□□□□ -0.97
SMG1-204ENST00000561940 PRR5P85299 388 aa9□□□□□ -0.97
SMG1-204ENST00000561940 TMEM62Q0P6H9 643 aa9□□□□□ -0.97
SMG1-204ENST00000561940 PABPC4Q13310 644 aaKnown RBP eCLIP9□□□□□ -0.97
SMG1-204ENST00000561940 ZC3H14Q6PJT7 736 aaKnown RBP9□□□□□ -0.97
SMG1-204ENST00000561940 SCUBE1Q8IWY4 988 aa9□□□□□ -0.97
SMG1-204ENST00000561940 BHLHE22Q8NFJ8 381 aaPredicted RBP9□□□□□ -0.97
SMG1-204ENST00000561940 CHAMP1Q96JM3 812 aa9□□□□□ -0.97
SMG1-204ENST00000561940 SIT1Q9Y3P8 196 aa9□□□□□ -0.97
SMG1-204ENST00000561940 DBX1A6NMT0 343 aa8.99□□□□□ -0.97
SMG1-204ENST00000561940 IRS4O14654 1257 aaPredicted RBP8.99□□□□□ -0.97
SMG1-204ENST00000561940 C6orf222P0C671 652 aaPredicted RBP8.99□□□□□ -0.97
SMG1-204ENST00000561940 FPR2P25090 351 aa8.99□□□□□ -0.97
SMG1-204ENST00000561940 BCL6P41182 706 aa8.99□□□□□ -0.97
SMG1-204ENST00000561940 MAPKAPK2P49137 400 aa8.99□□□□□ -0.97
SMG1-204ENST00000561940 ZNF200P98182 395 aaPredicted RBP8.99□□□□□ -0.97
SMG1-204ENST00000561940 PTPROQ16827 1216 aa8.99□□□□□ -0.97
SMG1-204ENST00000561940 OLFML2BQ68BL8 750 aa8.99□□□□□ -0.97
SMG1-204ENST00000561940 IQCEQ6IPM2 695 aa8.99□□□□□ -0.97
SMG1-204ENST00000561940 CEP68Q76N32 757 aa8.99□□□□□ -0.97
SMG1-204ENST00000561940 CABP7Q86V35 215 aa8.99□□□□□ -0.97
SMG1-204ENST00000561940 LDHDQ86WU2 507 aa8.99□□□□□ -0.97
SMG1-204ENST00000561940 DHX37Q8IY37 1157 aaKnown RBP8.99□□□□□ -0.97
SMG1-204ENST00000561940 SYNPOQ8N3V7 929 aa8.99□□□□□ -0.97
SMG1-204ENST00000561940 RCBTB1Q8NDN9 531 aa8.99□□□□□ -0.97
SMG1-204ENST00000561940 KCTD13Q8WZ19 329 aa8.99□□□□□ -0.97
SMG1-204ENST00000561940 C1orf159Q96HA4 380 aa8.99□□□□□ -0.97
SMG1-204ENST00000561940 PCDHA2Q9Y5H9 948 aa8.99□□□□□ -0.97
SMG1-204ENST00000561940 TIMM13Q9Y5L4 95 aaPredicted RBP8.99□□□□□ -0.97
SMG1-204ENST00000561940 C22orf46C9J442 243 aa8.98□□□□□ -0.97
SMG1-204ENST00000561940 HRKO00198 91 aa8.98□□□□□ -0.97
SMG1-204ENST00000561940 SRGAP3O43295 1099 aa8.98□□□□□ -0.97
SMG1-204ENST00000561940 DNAJC6O75061 913 aa8.98□□□□□ -0.97
SMG1-204ENST00000561940 MED14OSP0DP75 135 aa8.98□□□□□ -0.97
SMG1-204ENST00000561940 HSP90B1P14625 803 aaKnown RBP8.98□□□□□ -0.97
SMG1-204ENST00000561940 MASP1P48740 699 aa8.98□□□□□ -0.97
SMG1-204ENST00000561940 SUMO1P63165 101 aaKnown RBP8.98□□□□□ -0.97
SMG1-204ENST00000561940 NTRK3Q16288 839 aa8.98□□□□□ -0.97
SMG1-204ENST00000561940 KCNA10Q16322 511 aa8.98□□□□□ -0.97
SMG1-204ENST00000561940 SLC35F1Q5T1Q4 408 aa8.98□□□□□ -0.97
SMG1-204ENST00000561940 E4F1Q66K89 784 aaPredicted RBP8.98□□□□□ -0.97
SMG1-204ENST00000561940 USP53Q70EK8 1073 aa8.98□□□□□ -0.97
SMG1-204ENST00000561940 PLEKHO2Q8TD55 490 aa8.98□□□□□ -0.97
SMG1-204ENST00000561940 IPO9Q96P70 1041 aaKnown RBP8.98□□□□□ -0.97
SMG1-204ENST00000561940 SPC25Q9HBM1 224 aa8.98□□□□□ -0.97
SMG1-204ENST00000561940 CD320Q9NPF0 282 aa8.98□□□□□ -0.97
SMG1-204ENST00000561940 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP8.98□□□□□ -0.97
SMG1-204ENST00000561940 FBXL7Q9UJT9 491 aa8.98□□□□□ -0.97
SMG1-204ENST00000561940 CCDC163A0A0D9SF12 145 aa8.97□□□□□ -0.97
SMG1-204ENST00000561940 PLD2O14939 933 aa8.97□□□□□ -0.97
SMG1-204ENST00000561940 LTBRP36941 435 aa8.97□□□□□ -0.97
SMG1-204ENST00000561940 RPL11P62913 178 aaKnown RBP8.97□□□□□ -0.97
SMG1-204ENST00000561940 SSPNQ14714 243 aa8.97□□□□□ -0.97
SMG1-204ENST00000561940 PANK1Q8TE04 598 aa8.97□□□□□ -0.97
SMG1-204ENST00000561940 MZB1Q8WU39 189 aa8.97□□□□□ -0.97
SMG1-204ENST00000561940 NINJ1Q92982 152 aa8.97□□□□□ -0.97
SMG1-204ENST00000561940 CNOT6Q9ULM6 557 aaKnown RBP8.97□□□□□ -0.97
SMG1-204ENST00000561940 PRKAB1Q9Y478 270 aa8.97□□□□□ -0.97
SMG1-204ENST00000561940 CFPP27918 469 aa8.96□□□□□ -0.98
SMG1-204ENST00000561940 KCNAB2Q13303 367 aa8.96□□□□□ -0.98
SMG1-204ENST00000561940 WWC2Q6AWC2 1192 aa8.96□□□□□ -0.98
SMG1-204ENST00000561940 NIM1KQ8IY84 436 aa8.96□□□□□ -0.98
SMG1-204ENST00000561940 SLC7A14Q8TBB6 771 aa8.96□□□□□ -0.98
SMG1-204ENST00000561940 PLAAQ9Y263 795 aa8.96□□□□□ -0.98
SMG1-204ENST00000561940 N4BP3O15049 544 aa8.95□□□□□ -0.98
SMG1-204ENST00000561940 MYO1BO43795 1136 aa8.95□□□□□ -0.98
SMG1-204ENST00000561940 SDSP20132 328 aa8.95□□□□□ -0.98
SMG1-204ENST00000561940 LINC00310P59036 64 aa8.95□□□□□ -0.98
SMG1-204ENST00000561940 MAP4K2Q12851 820 aa8.95□□□□□ -0.98
SMG1-204ENST00000561940 TM4SF20Q53R12 229 aa8.95□□□□□ -0.98
SMG1-204ENST00000561940 ACBD5Q5T8D3 534 aaPredicted RBP8.95□□□□□ -0.98
SMG1-204ENST00000561940 MFSD3Q96ES6 412 aa8.95□□□□□ -0.98
SMG1-204ENST00000561940 TRMT2BQ96GJ1 504 aaKnown RBP8.95□□□□□ -0.98
SMG1-204ENST00000561940 MRPL4Q9BYD3 311 aaKnown RBP8.95□□□□□ -0.98
SMG1-204ENST00000561940 IRF2BPLQ9H1B7 796 aa8.95□□□□□ -0.98
SMG1-204ENST00000561940 SLC52A2Q9HAB3 445 aa8.95□□□□□ -0.98
SMG1-204ENST00000561940 NDOR1Q9UHB4 597 aa8.95□□□□□ -0.98
SMG1-204ENST00000561940 KCTD3Q9Y597 815 aa8.95□□□□□ -0.98
SMG1-204ENST00000561940 COL4A3BPQ9Y5P4 624 aa8.95□□□□□ -0.98
SMG1-204ENST00000561940 BUB1BO60566 1050 aaPredicted RBP8.94□□□□□ -0.98
SMG1-204ENST00000561940 MSCO60682 206 aa8.94□□□□□ -0.98
SMG1-204ENST00000561940 PI3P19957 117 aa8.94□□□□□ -0.98
SMG1-204ENST00000561940 FNDC3BQ53EP0 1204 aaKnown RBP8.94□□□□□ -0.98
SMG1-204ENST00000561940 KCNT2Q6UVM3 1135 aa8.94□□□□□ -0.98
SMG1-204ENST00000561940 NLRP10Q86W26 655 aa8.94□□□□□ -0.98
SMG1-204ENST00000561940 CILP2Q8IUL8 1156 aa8.94□□□□□ -0.98
SMG1-204ENST00000561940 IGDCC3Q8IVU1 814 aa8.94□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms