RNA–Protein interactions for RNA: ENST00000561749.1

SMPD3-202, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 2

Gene SMPD3, Length 627 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-202ENST00000561749 EIF3JO75822 258 aaKnown RBP26.83■■□□□ 1.89
SMPD3-202ENST00000561749 ARIH2O95376 493 aa26.83■■□□□ 1.89
SMPD3-202ENST00000561749 SCFD2Q8WU76 684 aa26.83■■□□□ 1.89
SMPD3-202ENST00000561749 CCDC12Q8WUD4 166 aaPredicted RBP26.83■■□□□ 1.89
SMPD3-202ENST00000561749 COPS5Q92905 334 aa26.83■■□□□ 1.89
SMPD3-202ENST00000561749 DYNC1LI2O43237 492 aaPredicted RBP26.82■■□□□ 1.88
SMPD3-202ENST00000561749 TXNP10599 105 aaKnown RBP26.82■■□□□ 1.88
SMPD3-202ENST00000561749 BEX3Q00994 111 aa26.82■■□□□ 1.88
SMPD3-202ENST00000561749 DUSP28Q4G0W2 176 aa26.82■■□□□ 1.88
SMPD3-202ENST00000561749 JAKMIP3Q5VZ66 844 aa26.82■■□□□ 1.88
SMPD3-202ENST00000561749 RNF180Q86T96 592 aa26.82■■□□□ 1.88
SMPD3-202ENST00000561749 CCDC83Q8IWF9 413 aa26.82■■□□□ 1.88
SMPD3-202ENST00000561749 UPF3AQ9H1J1 476 aaKnown RBP26.82■■□□□ 1.88
SMPD3-202ENST00000561749 C6orf50Q9HD87 102 aa26.82■■□□□ 1.88
SMPD3-202ENST00000561749 ESYT2A0FGR8 921 aa26.81■■□□□ 1.88
SMPD3-202ENST00000561749 RGS20O76081 388 aa26.81■■□□□ 1.88
SMPD3-202ENST00000561749 GJA9P57773 515 aa26.81■■□□□ 1.88
SMPD3-202ENST00000561749 MRPS9P82933 396 aaKnown RBP26.81■■□□□ 1.88
SMPD3-202ENST00000561749 TTLL4Q14679 1199 aa26.81■■□□□ 1.88
SMPD3-202ENST00000561749 CCDC148Q8NFR7 591 aa26.81■■□□□ 1.88
SMPD3-202ENST00000561749 FERMT2Q96AC1 680 aa26.81■■□□□ 1.88
SMPD3-202ENST00000561749 ZMYND12Q9H0C1 365 aa26.81■■□□□ 1.88
SMPD3-202ENST00000561749 AP5M1Q9H0R1 490 aa26.81■■□□□ 1.88
SMPD3-202ENST00000561749 SPC25Q9HBM1 224 aa26.81■■□□□ 1.88
SMPD3-202ENST00000561749 RTEL1Q9NZ71 1219 aa26.81■■□□□ 1.88
SMPD3-202ENST00000561749 ORC3Q9UBD5 711 aaPredicted RBP26.81■■□□□ 1.88
SMPD3-202ENST00000561749 STK36Q9NRP7 1315 aa26.81■■□□□ 1.88
SMPD3-202ENST00000561749 ST18O60284 1047 aa26.8■■□□□ 1.88
SMPD3-202ENST00000561749 JAK2O60674 1132 aa26.8■■□□□ 1.88
SMPD3-202ENST00000561749 NLRP5P59047 1200 aa26.8■■□□□ 1.88
SMPD3-202ENST00000561749 LY6KQ17RY6 165 aa26.8■■□□□ 1.88
SMPD3-202ENST00000561749 NSUN7Q8NE18 718 aaKnown RBP26.8■■□□□ 1.88
SMPD3-202ENST00000561749 KLHDC9Q8NEP7 349 aa26.8■■□□□ 1.88
SMPD3-202ENST00000561749 ANO3Q9BYT9 981 aa26.8■■□□□ 1.88
SMPD3-202ENST00000561749 SENP6Q9GZR1 1112 aaPredicted RBP26.8■■□□□ 1.88
SMPD3-202ENST00000561749 CTAGE5O15320 804 aa26.79■■□□□ 1.88
SMPD3-202ENST00000561749 CD2BP2O95400 341 aaKnown RBP26.79■■□□□ 1.88
SMPD3-202ENST00000561749 COL6A1P12109 1028 aa26.79■■□□□ 1.88
SMPD3-202ENST00000561749 CLK2P49760 499 aaKnown RBP26.79■■□□□ 1.88
SMPD3-202ENST00000561749 PCNX4Q63HM2 1172 aa26.79■■□□□ 1.88
SMPD3-202ENST00000561749 OR6J1Q8NGC5 347 aa26.79■■□□□ 1.88
SMPD3-202ENST00000561749 RASGRP4Q8TDF6 673 aa26.79■■□□□ 1.88
SMPD3-202ENST00000561749 ZSCAN31Q96LW9 406 aaPredicted RBP26.79■■□□□ 1.88
SMPD3-202ENST00000561749 GLT8D2Q9H1C3 349 aa26.79■■□□□ 1.88
SMPD3-202ENST00000561749 SH3GLB2Q9NR46 395 aa26.79■■□□□ 1.88
SMPD3-202ENST00000561749 MRVI1Q9Y6F6 885 aa26.79■■□□□ 1.88
SMPD3-202ENST00000561749 KCNA10Q16322 511 aa26.78■■□□□ 1.88
SMPD3-202ENST00000561749 GNASQ5JWF2 1037 aa26.78■■□□□ 1.88
SMPD3-202ENST00000561749 CCDC62Q6P9F0 684 aa26.78■■□□□ 1.88
SMPD3-202ENST00000561749 EHMT1Q9H9B1 1298 aa26.78■■□□□ 1.88
SMPD3-202ENST00000561749 GJB4Q9NTQ9 266 aa26.78■■□□□ 1.88
SMPD3-202ENST00000561749 SORBS3O60504 671 aa26.77■■□□□ 1.88
SMPD3-202ENST00000561749 FDPSP14324 419 aaKnown RBP26.77■■□□□ 1.88
SMPD3-202ENST00000561749 GNA11P29992 359 aa26.77■■□□□ 1.88
SMPD3-202ENST00000561749 REXO1Q8N1G1 1221 aaKnown RBP26.77■■□□□ 1.88
SMPD3-202ENST00000561749 KCNJ14Q9UNX9 436 aa26.77■■□□□ 1.88
SMPD3-202ENST00000561749 PHF24Q9UPV7 400 aa26.77■■□□□ 1.88
SMPD3-202ENST00000561749 NKRFO15226 690 aaKnown RBP eCLIP26.76■■□□□ 1.87
SMPD3-202ENST00000561749 FOSP01100 380 aaPredicted RBP26.76■■□□□ 1.87
SMPD3-202ENST00000561749 CST5P28325 142 aaPredicted RBP26.76■■□□□ 1.87
SMPD3-202ENST00000561749 FOSBP53539 338 aa26.76■■□□□ 1.87
SMPD3-202ENST00000561749 ATN1P54259 1190 aaPredicted RBP26.76■■□□□ 1.87
SMPD3-202ENST00000561749 AP3B2Q13367 1082 aa26.76■■□□□ 1.87
SMPD3-202ENST00000561749 FSCN1Q16658 493 aaKnown RBP26.76■■□□□ 1.87
SMPD3-202ENST00000561749 CCSAPQ6IQ19 270 aaPredicted RBP26.76■■□□□ 1.87
SMPD3-202ENST00000561749 ALG1Q9BT22 464 aa26.76■■□□□ 1.87
SMPD3-202ENST00000561749 HTATIP2Q9BUP3 242 aa26.76■■□□□ 1.87
SMPD3-202ENST00000561749 SH2B1Q9NRF2 756 aaPredicted RBP26.76■■□□□ 1.87
SMPD3-202ENST00000561749 DDX41Q9UJV9 622 aaKnown RBP26.76■■□□□ 1.87
SMPD3-202ENST00000561749 Q9Y3F1 56 aa26.76■■□□□ 1.87
SMPD3-202ENST00000561749 ACLYP53396 1101 aa26.75■■□□□ 1.87
SMPD3-202ENST00000561749 DPF3Q92784 378 aa26.75■■□□□ 1.87
SMPD3-202ENST00000561749 INPP4AQ96PE3 977 aaPredicted RBP26.75■■□□□ 1.87
SMPD3-202ENST00000561749 A0A1W2PQ45 241 aaPredicted RBP26.74■■□□□ 1.87
SMPD3-202ENST00000561749 A0A1W2PQY0 241 aa26.74■■□□□ 1.87
SMPD3-202ENST00000561749 ASGR1P07306 291 aa26.74■■□□□ 1.87
SMPD3-202ENST00000561749 GNPTABQ3T906 1256 aa26.74■■□□□ 1.87
SMPD3-202ENST00000561749 XRRA1Q6P2D8 792 aa26.74■■□□□ 1.87
SMPD3-202ENST00000561749 TEX2Q8IWB9 1127 aa26.74■■□□□ 1.87
SMPD3-202ENST00000561749 PCSK9Q8NBP7 692 aaKnown RBP26.74■■□□□ 1.87
SMPD3-202ENST00000561749 BICD2Q8TD16 824 aa26.74■■□□□ 1.87
SMPD3-202ENST00000561749 TSEN34Q9BSV6 310 aaKnown RBP26.74■■□□□ 1.87
SMPD3-202ENST00000561749 STAM2O75886 525 aa26.73■■□□□ 1.87
SMPD3-202ENST00000561749 GH1P01241 217 aa26.73■■□□□ 1.87
SMPD3-202ENST00000561749 NKX3-2P78367 333 aa26.73■■□□□ 1.87
SMPD3-202ENST00000561749 SP2Q02086 613 aa26.73■■□□□ 1.87
SMPD3-202ENST00000561749 ARHGAP1Q07960 439 aa26.73■■□□□ 1.87
SMPD3-202ENST00000561749 SEMA3FQ13275 785 aa26.73■■□□□ 1.87
SMPD3-202ENST00000561749 LRRC26Q2I0M4 334 aa26.73■■□□□ 1.87
SMPD3-202ENST00000561749 WASF1Q92558 559 aa26.73■■□□□ 1.87
SMPD3-202ENST00000561749 PCDHA4Q9UN74 947 aa26.73■■□□□ 1.87
SMPD3-202ENST00000561749 MOXD2PA6NHM9 499 aa26.72■■□□□ 1.87
SMPD3-202ENST00000561749 ITGB5P18084 799 aa26.72■■□□□ 1.87
SMPD3-202ENST00000561749 UBA1P22314 1058 aaKnown RBP26.72■■□□□ 1.87
SMPD3-202ENST00000561749 SREBF1P36956 1147 aa26.72■■□□□ 1.87
SMPD3-202ENST00000561749 NPY5RQ15761 445 aa26.72■■□□□ 1.87
SMPD3-202ENST00000561749 NLRX1Q86UT6 975 aa26.72■■□□□ 1.87
SMPD3-202ENST00000561749 BLIDQ8IZY5 108 aa26.72■■□□□ 1.87
SMPD3-202ENST00000561749 UBIAD1Q9Y5Z9 338 aa26.72■■□□□ 1.87
SMPD3-202ENST00000561749 PDE4DIPQ5VU43 2346 aa26.71■■□□□ 1.87
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms