RNA–Protein interactions for RNA: ENST00000561425.5

TPM1-232, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-232ENST00000561425 LY6KQ17RY6 165 aa23.86■■□□□ 1.41
TPM1-232ENST00000561425 MICU3Q86XE3 530 aa23.86■■□□□ 1.41
TPM1-232ENST00000561425 RAB11FIP4Q86YS3 637 aa23.86■■□□□ 1.41
TPM1-232ENST00000561425 USP26Q9BXU7 913 aa23.86■■□□□ 1.41
TPM1-232ENST00000561425 SEC63Q9UGP8 760 aaKnown RBP23.86■■□□□ 1.41
TPM1-232ENST00000561425 ZBTB43O43298 467 aa23.85■■□□□ 1.41
TPM1-232ENST00000561425 TIMP1P01033 207 aa23.85■■□□□ 1.41
TPM1-232ENST00000561425 GH1P01241 217 aa23.85■■□□□ 1.41
TPM1-232ENST00000561425 IL31RAQ8NI17 732 aa23.85■■□□□ 1.41
TPM1-232ENST00000561425 JAKMIP1Q96N16 626 aaKnown RBP23.85■■□□□ 1.41
TPM1-232ENST00000561425 CPA1P15085 419 aa23.84■■□□□ 1.41
TPM1-232ENST00000561425 PSMC6P62333 389 aa23.84■■□□□ 1.41
TPM1-232ENST00000561425 BRDTQ58F21 947 aaPredicted RBP23.84■■□□□ 1.41
TPM1-232ENST00000561425 FCHSD1Q86WN1 690 aa23.84■■□□□ 1.41
TPM1-232ENST00000561425 MTG1Q9BT17 334 aaPredicted RBP23.84■■□□□ 1.41
TPM1-232ENST00000561425 TGFB3P10600 412 aa23.83■■□□□ 1.41
TPM1-232ENST00000561425 RAG1P15918 1043 aa23.83■■□□□ 1.41
TPM1-232ENST00000561425 MRPS9P82933 396 aaKnown RBP23.83■■□□□ 1.41
TPM1-232ENST00000561425 GPR153Q6NV75 609 aa23.83■■□□□ 1.41
TPM1-232ENST00000561425 KCNV1Q6PIU1 500 aa23.83■■□□□ 1.41
TPM1-232ENST00000561425 BLOC1S2Q6QNY1 142 aa23.83■■□□□ 1.41
TPM1-232ENST00000561425 CNTNAP5Q8WYK1 1306 aa23.83■■□□□ 1.4
TPM1-232ENST00000561425 KLF18A0A0U1RQI7 1052 aa23.82■■□□□ 1.4
TPM1-232ENST00000561425 TLR3O15455 904 aaKnown RBP23.82■■□□□ 1.4
TPM1-232ENST00000561425 STAM2O75886 525 aa23.82■■□□□ 1.4
TPM1-232ENST00000561425 MYCLP12524 364 aaPredicted RBP23.82■■□□□ 1.4
TPM1-232ENST00000561425 RPS6KB1P23443 525 aa23.82■■□□□ 1.4
TPM1-232ENST00000561425 CDC27P30260 824 aa23.82■■□□□ 1.4
TPM1-232ENST00000561425 CCND2P30279 289 aa23.82■■□□□ 1.4
TPM1-232ENST00000561425 EVCP57679 992 aa23.82■■□□□ 1.4
TPM1-232ENST00000561425 RTN1Q16799 776 aa23.82■■□□□ 1.4
TPM1-232ENST00000561425 USP17L6PQ6QN14 398 aa23.82■■□□□ 1.4
TPM1-232ENST00000561425 Q6ZUG5 572 aa23.82■■□□□ 1.4
TPM1-232ENST00000561425 CCDC82Q8N4S0 544 aa23.82■■□□□ 1.4
TPM1-232ENST00000561425 AFG1LQ8WV93 481 aa23.82■■□□□ 1.4
TPM1-232ENST00000561425 NID2Q14112 1375 aa23.81■■□□□ 1.4
TPM1-232ENST00000561425 MYL3P08590 195 aa23.81■■□□□ 1.4
TPM1-232ENST00000561425 HOXD8P13378 290 aaPredicted RBP23.81■■□□□ 1.4
TPM1-232ENST00000561425 PSMA5P28066 241 aa23.81■■□□□ 1.4
TPM1-232ENST00000561425 ICAM3P32942 547 aa23.81■■□□□ 1.4
TPM1-232ENST00000561425 LAMC2Q13753 1193 aa23.81■■□□□ 1.4
TPM1-232ENST00000561425 SHHQ15465 462 aa23.81■■□□□ 1.4
TPM1-232ENST00000561425 MFSD5Q6N075 450 aa23.81■■□□□ 1.4
TPM1-232ENST00000561425 TEX2Q8IWB9 1127 aa23.81■■□□□ 1.4
TPM1-232ENST00000561425 INPP4AQ96PE3 977 aaPredicted RBP23.81■■□□□ 1.4
TPM1-232ENST00000561425 ALDH8A1Q9H2A2 487 aaPredicted RBP23.81■■□□□ 1.4
TPM1-232ENST00000561425 PSTPIP2Q9H939 334 aa23.81■■□□□ 1.4
TPM1-232ENST00000561425 ZSWIM6Q9HCJ5 1215 aa23.81■■□□□ 1.4
TPM1-232ENST00000561425 MRVI1Q9Y6F6 885 aa23.81■■□□□ 1.4
TPM1-232ENST00000561425 hCG_1642624A0A1W2PR95 340 aa23.8■■□□□ 1.4
TPM1-232ENST00000561425 B4GALT4O60513 344 aa23.8■■□□□ 1.4
TPM1-232ENST00000561425 MMP3P08254 477 aa23.8■■□□□ 1.4
TPM1-232ENST00000561425 EPHB4P54760 987 aa23.8■■□□□ 1.4
TPM1-232ENST00000561425 SP2Q02086 613 aa23.8■■□□□ 1.4
TPM1-232ENST00000561425 MYSM1Q5VVJ2 828 aa23.8■■□□□ 1.4
TPM1-232ENST00000561425 XRRA1Q6P2D8 792 aa23.8■■□□□ 1.4
TPM1-232ENST00000561425 NFRKBQ6P4R8 1299 aa23.8■■□□□ 1.4
TPM1-232ENST00000561425 SMARCC2Q8TAQ2 1214 aa23.8■■□□□ 1.4
TPM1-232ENST00000561425 CUL5Q93034 780 aa23.8■■□□□ 1.4
TPM1-232ENST00000561425 LRCH3Q96II8 777 aa23.8■■□□□ 1.4
TPM1-232ENST00000561425 KIAA1217Q5T5P2 1943 aa23.8■■□□□ 1.4
TPM1-232ENST00000561425 LAMA3Q16787 3333 aa23.8■■□□□ 1.4
TPM1-232ENST00000561425 PTPN11Q06124 597 aaPredicted RBP23.79■■□□□ 1.4
TPM1-232ENST00000561425 NBPF20Q3BBV1 942 aa23.79■■□□□ 1.4
TPM1-232ENST00000561425 C9orf50Q5SZB4 431 aa23.79■■□□□ 1.4
TPM1-232ENST00000561425 CELF3Q5SZQ8 465 aaKnown RBP23.79■■□□□ 1.4
TPM1-232ENST00000561425 PCNX4Q63HM2 1172 aa23.79■■□□□ 1.4
TPM1-232ENST00000561425 PPTC7Q8NI37 304 aa23.79■■□□□ 1.4
TPM1-232ENST00000561425 KAT2BQ92831 832 aa23.79■■□□□ 1.4
TPM1-232ENST00000561425 BRF1Q92994 677 aa23.79■■□□□ 1.4
TPM1-232ENST00000561425 TM6SF1Q9BZW5 370 aa23.79■■□□□ 1.4
TPM1-232ENST00000561425 TRPV6Q9H1D0 765 aa23.79■■□□□ 1.4
TPM1-232ENST00000561425 V9GY48 417 aaPredicted RBP23.79■■□□□ 1.4
TPM1-232ENST00000561425 SCN10AQ9Y5Y9 1956 aa23.78■■□□□ 1.4
TPM1-232ENST00000561425 GOLGA8AA7E2F4 631 aa23.78■■□□□ 1.4
TPM1-232ENST00000561425 GOLGA8BA8MQT2 603 aa23.78■■□□□ 1.4
TPM1-232ENST00000561425 SPATA31C2B4DYI2 1134 aa23.78■■□□□ 1.4
TPM1-232ENST00000561425 CASTP20810 708 aaKnown RBP23.78■■□□□ 1.4
TPM1-232ENST00000561425 ADD1P35611 737 aaKnown RBP23.78■■□□□ 1.4
TPM1-232ENST00000561425 FPGSQ05932 587 aa23.78■■□□□ 1.4
TPM1-232ENST00000561425 APOBRQ0VD83 1088 aa23.78■■□□□ 1.4
TPM1-232ENST00000561425 WWC2Q6AWC2 1192 aa23.78■■□□□ 1.4
TPM1-232ENST00000561425 TYW1BQ6NUM6 668 aa23.78■■□□□ 1.4
TPM1-232ENST00000561425 RUFY3Q7L099 469 aa23.78■■□□□ 1.4
TPM1-232ENST00000561425 SEMA3FQ13275 785 aa23.77■■□□□ 1.4
TPM1-232ENST00000561425 C16orf59Q7L2K0 433 aa23.77■■□□□ 1.4
TPM1-232ENST00000561425 SESTD1Q86VW0 696 aa23.77■■□□□ 1.4
TPM1-232ENST00000561425 DHX37Q8IY37 1157 aaKnown RBP23.77■■□□□ 1.4
TPM1-232ENST00000561425 GPKOWQ92917 476 aaPredicted RBP eCLIP23.77■■□□□ 1.4
TPM1-232ENST00000561425 ZFP91Q96JP5 570 aaPredicted RBP23.77■■□□□ 1.4
TPM1-232ENST00000561425 CCDC196A0A1B0GTZ2 297 aa23.76■■□□□ 1.39
TPM1-232ENST00000561425 hCG_1984214I3L0E3 225 aa23.76■■□□□ 1.39
TPM1-232ENST00000561425 PPFIA4O75335 1185 aa23.76■■□□□ 1.39
TPM1-232ENST00000561425 SUPT20HL2P0C7V6 817 aa23.76■■□□□ 1.39
TPM1-232ENST00000561425 UBA1P22314 1058 aaKnown RBP23.76■■□□□ 1.39
TPM1-232ENST00000561425 DGKDQ16760 1214 aa23.76■■□□□ 1.39
TPM1-232ENST00000561425 PPP1R18Q6NYC8 613 aa23.76■■□□□ 1.39
TPM1-232ENST00000561425 HEATR3Q7Z4Q2 680 aa23.76■■□□□ 1.39
TPM1-232ENST00000561425 ZNF713Q8N859 430 aaPredicted RBP23.76■■□□□ 1.39
TPM1-232ENST00000561425 NOC4LQ9BVI4 516 aaKnown RBP23.76■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms