RNA–Protein interactions for RNA: ENST00000561391.1

SPG11-225, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 629 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-225ENST00000561391 EIF4A3P38919 411 aaKnown RBP4.35□□□□□ -1.71
SPG11-225ENST00000561391 RACK1P63244 317 aaKnown RBP4.35□□□□□ -1.71
SPG11-225ENST00000561391 CAP1Q01518 475 aa4.35□□□□□ -1.71
SPG11-225ENST00000561391 BNIP3Q12983 259 aa4.35□□□□□ -1.71
SPG11-225ENST00000561391 CAMK2GQ13555 558 aaPredicted RBP4.35□□□□□ -1.71
SPG11-225ENST00000561391 TBC1D10BQ4KMP7 808 aaPredicted RBP4.35□□□□□ -1.71
SPG11-225ENST00000561391 SNAP47Q5SQN1 464 aa4.35□□□□□ -1.71
SPG11-225ENST00000561391 HP1BP3Q5SSJ5 553 aaPredicted RBP4.35□□□□□ -1.71
SPG11-225ENST00000561391 AGMOQ6ZNB7 445 aa4.35□□□□□ -1.71
SPG11-225ENST00000561391 HDGFL2Q7Z4V5 671 aaPredicted RBP4.35□□□□□ -1.71
SPG11-225ENST00000561391 PDZD3Q86UT5 571 aa4.35□□□□□ -1.71
SPG11-225ENST00000561391 ZNF654Q8IZM8 581 aa4.35□□□□□ -1.71
SPG11-225ENST00000561391 GOLM1Q8NBJ4 401 aa4.35□□□□□ -1.71
SPG11-225ENST00000561391 MAFAQ8NHW3 353 aaPredicted RBP4.35□□□□□ -1.71
SPG11-225ENST00000561391 PI4K2BQ8TCG2 481 aa4.35□□□□□ -1.71
SPG11-225ENST00000561391 GPBAR1Q8TDU6 330 aa4.35□□□□□ -1.71
SPG11-225ENST00000561391 SH3TC2Q8TF17 1288 aa4.35□□□□□ -1.71
SPG11-225ENST00000561391 ERO1AQ96HE7 468 aa4.35□□□□□ -1.71
SPG11-225ENST00000561391 PSMD1Q99460 953 aa4.35□□□□□ -1.71
SPG11-225ENST00000561391 KRTAP9-3Q9BYQ3 159 aa4.35□□□□□ -1.71
SPG11-225ENST00000561391 NRSN2Q9GZP1 204 aa4.35□□□□□ -1.71
SPG11-225ENST00000561391 SLC12A5Q9H2X9 1139 aa4.35□□□□□ -1.71
SPG11-225ENST00000561391 ACBD3Q9H3P7 528 aa4.35□□□□□ -1.71
SPG11-225ENST00000561391 CCSER2Q9H7U1 834 aa4.35□□□□□ -1.71
SPG11-225ENST00000561391 DDX41Q9UJV9 622 aaKnown RBP4.35□□□□□ -1.71
SPG11-225ENST00000561391 PCDHA4Q9UN74 947 aa4.35□□□□□ -1.71
SPG11-225ENST00000561391 EPB41L3Q9Y2J2 1087 aaPredicted RBP4.35□□□□□ -1.71
SPG11-225ENST00000561391 ZBTB1Q9Y2K1 713 aa4.35□□□□□ -1.71
SPG11-225ENST00000561391 DAGLAQ9Y4D2 1042 aa4.35□□□□□ -1.71
SPG11-225ENST00000561391 PTCH2Q9Y6C5 1203 aa4.35□□□□□ -1.71
SPG11-225ENST00000561391 NPC1L1Q9UHC9 1359 aa4.35□□□□□ -1.71
SPG11-225ENST00000561391 SBNO2Q9Y2G9 1366 aa4.35□□□□□ -1.71
SPG11-225ENST00000561391 COL4A5P29400 1685 aa4.35□□□□□ -1.71
SPG11-225ENST00000561391 COL11A2P13942 1736 aaPredicted RBP4.35□□□□□ -1.71
SPG11-225ENST00000561391 SPTBN5Q9NRC6 3674 aaKnown RBP4.34□□□□□ -1.71
SPG11-225ENST00000561391 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP4.34□□□□□ -1.71
SPG11-225ENST00000561391 B8ZZF3 427 aa4.34□□□□□ -1.71
SPG11-225ENST00000561391 PPIP5K2O43314 1243 aa4.34□□□□□ -1.71
SPG11-225ENST00000561391 RNASE1P07998 156 aaKnown RBP4.34□□□□□ -1.71
SPG11-225ENST00000561391 SLFN14P0C7P3 912 aa4.34□□□□□ -1.71
SPG11-225ENST00000561391 CD8BP10966 210 aa4.34□□□□□ -1.71
SPG11-225ENST00000561391 FUT4P22083 530 aa4.34□□□□□ -1.71
SPG11-225ENST00000561391 ALDH1B1P30837 517 aa4.34□□□□□ -1.71
SPG11-225ENST00000561391 RAP1GAPP47736 663 aa4.34□□□□□ -1.71
SPG11-225ENST00000561391 TNNI2P48788 182 aa4.34□□□□□ -1.71
SPG11-225ENST00000561391 RPS26P62854 115 aaKnown RBP4.34□□□□□ -1.71
SPG11-225ENST00000561391 PTPN11Q06124 597 aaPredicted RBP4.34□□□□□ -1.71
SPG11-225ENST00000561391 ZNF252P-AS1Q0IIN9 211 aa4.34□□□□□ -1.71
SPG11-225ENST00000561391 SREBF2Q12772 1141 aa4.34□□□□□ -1.71
SPG11-225ENST00000561391 AOC3Q16853 763 aa4.34□□□□□ -1.71
SPG11-225ENST00000561391 LRIT3Q3SXY7 679 aa4.34□□□□□ -1.71
SPG11-225ENST00000561391 CYP27C1Q4G0S4 372 aa4.34□□□□□ -1.71
SPG11-225ENST00000561391 DIEXFQ68CQ4 756 aaKnown RBP4.34□□□□□ -1.71
SPG11-225ENST00000561391 FBXL19Q6PCT2 694 aa4.34□□□□□ -1.71
SPG11-225ENST00000561391 BNC2Q6ZN30 1099 aaPredicted RBP4.34□□□□□ -1.71
SPG11-225ENST00000561391 LRRN4CLQ8ND94 238 aa4.34□□□□□ -1.71
SPG11-225ENST00000561391 CDCA5Q96FF9 252 aa4.34□□□□□ -1.71
SPG11-225ENST00000561391 CDX2Q99626 313 aaPredicted RBP4.34□□□□□ -1.71
SPG11-225ENST00000561391 GDF15Q99988 308 aa4.34□□□□□ -1.71
SPG11-225ENST00000561391 SPON2Q9BUD6 331 aa4.34□□□□□ -1.71
SPG11-225ENST00000561391 IGSF5Q9NSI5 407 aa4.34□□□□□ -1.71
SPG11-225ENST00000561391 ZNRF3Q9ULT6 936 aa4.34□□□□□ -1.71
SPG11-225ENST00000561391 ZMYND8Q9ULU4 1186 aaPredicted RBP4.34□□□□□ -1.71
SPG11-225ENST00000561391 CSADQ9Y600 493 aa4.34□□□□□ -1.71
SPG11-225ENST00000561391 COL15A1P39059 1388 aa4.34□□□□□ -1.71
SPG11-225ENST00000561391 DCDC2CA8MYV0 355 aa4.33□□□□□ -1.72
SPG11-225ENST00000561391 TLR3O15455 904 aaKnown RBP4.33□□□□□ -1.72
SPG11-225ENST00000561391 ZNF862O60290 1169 aa4.33□□□□□ -1.72
SPG11-225ENST00000561391 F13A1P00488 732 aa4.33□□□□□ -1.72
SPG11-225ENST00000561391 BMP8BP34820 402 aa4.33□□□□□ -1.72
SPG11-225ENST00000561391 MRE11P49959 708 aa4.33□□□□□ -1.72
SPG11-225ENST00000561391 HNRNPUQ00839 825 aaKnown RBP eCLIP4.33□□□□□ -1.72
SPG11-225ENST00000561391 SP3Q02447 781 aa4.33□□□□□ -1.72
SPG11-225ENST00000561391 LMNB2Q03252 620 aa4.33□□□□□ -1.72
SPG11-225ENST00000561391 RAD51AP2Q09MP3 1159 aa4.33□□□□□ -1.72
SPG11-225ENST00000561391 MLANAQ16655 118 aa4.33□□□□□ -1.72
SPG11-225ENST00000561391 PRAMEF18Q5VWM3 479 aa4.33□□□□□ -1.72
SPG11-225ENST00000561391 PDZRN4Q6ZMN7 1036 aaPredicted RBP4.33□□□□□ -1.72
SPG11-225ENST00000561391 WFDC3Q8IUB2 231 aa4.33□□□□□ -1.72
SPG11-225ENST00000561391 TDHQ8IZJ6 230 aa4.33□□□□□ -1.72
SPG11-225ENST00000561391 PLD6Q8N2A8 252 aaKnown RBP4.33□□□□□ -1.72
SPG11-225ENST00000561391 BHLHE22Q8NFJ8 381 aaPredicted RBP4.33□□□□□ -1.72
SPG11-225ENST00000561391 NETO1Q8TDF5 533 aa4.33□□□□□ -1.72
SPG11-225ENST00000561391 ELMO3Q96BJ8 720 aa4.33□□□□□ -1.72
SPG11-225ENST00000561391 SHISA4Q96DD7 197 aa4.33□□□□□ -1.72
SPG11-225ENST00000561391 LGR6Q9HBX8 967 aa4.33□□□□□ -1.72
SPG11-225ENST00000561391 CAPN10Q9HC96 672 aa4.33□□□□□ -1.72
SPG11-225ENST00000561391 PICK1Q9NRD5 415 aa4.33□□□□□ -1.72
SPG11-225ENST00000561391 MBNL3Q9NUK0 354 aaKnown RBP4.33□□□□□ -1.72
SPG11-225ENST00000561391 ADAMTS1Q9UHI8 967 aa4.33□□□□□ -1.72
SPG11-225ENST00000561391 ADAMTS6Q9UKP5 1117 aa4.33□□□□□ -1.72
SPG11-225ENST00000561391 SCAF8Q9UPN6 1271 aaKnown RBP4.33□□□□□ -1.72
SPG11-225ENST00000561391 INPP5FQ9Y2H2 1132 aa4.33□□□□□ -1.72
SPG11-225ENST00000561391 HTTP42858 3142 aa4.32□□□□□ -1.72
SPG11-225ENST00000561391 ASTN2O75129 1339 aaPredicted RBP4.32□□□□□ -1.72
SPG11-225ENST00000561391 A0A087WZG4 1122 aa4.32□□□□□ -1.72
SPG11-225ENST00000561391 ST20-MTHFSA0A0A6YYL1 179 aa4.32□□□□□ -1.72
SPG11-225ENST00000561391 PRAMEF22A3QJZ6 481 aa4.32□□□□□ -1.72
SPG11-225ENST00000561391 PPM1GO15355 546 aaPredicted RBP4.32□□□□□ -1.72
SPG11-225ENST00000561391 BPNT1O95861 308 aa4.32□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms