RNA–Protein interactions for RNA: ENST00000561377.1

HMBOX1-216, Transcript of homeobox containing 1, humanhuman

TSL 5

Gene HMBOX1, Length 307 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMBOX1-216ENST00000561377 ITGAVP06756 1048 aa7.84□□□□□ -1.15
HMBOX1-216ENST00000561377 C8BP07358 591 aa7.84□□□□□ -1.15
HMBOX1-216ENST00000561377 CYP4F3Q08477 520 aa7.84□□□□□ -1.15
HMBOX1-216ENST00000561377 ZC3H18Q86VM9 953 aaKnown RBP7.84□□□□□ -1.15
HMBOX1-216ENST00000561377 MIB1Q86YT6 1006 aa7.84□□□□□ -1.15
HMBOX1-216ENST00000561377 LINC00482Q8N8I6 264 aa7.84□□□□□ -1.15
HMBOX1-216ENST00000561377 BUD13Q9BRD0 619 aaKnown RBP eCLIP7.84□□□□□ -1.15
HMBOX1-216ENST00000561377 SPATA6Q9NWH7 488 aaPredicted RBP7.84□□□□□ -1.15
HMBOX1-216ENST00000561377 B2RBV5 119 aa7.83□□□□□ -1.16
HMBOX1-216ENST00000561377 PRICKLE3O43900 615 aaPredicted RBP7.83□□□□□ -1.16
HMBOX1-216ENST00000561377 SCG5P05408 212 aa7.83□□□□□ -1.16
HMBOX1-216ENST00000561377 ECI1P42126 302 aa7.83□□□□□ -1.16
HMBOX1-216ENST00000561377 ACBD5Q5T8D3 534 aaPredicted RBP7.83□□□□□ -1.16
HMBOX1-216ENST00000561377 CEP68Q76N32 757 aa7.83□□□□□ -1.16
HMBOX1-216ENST00000561377 Q8N1Y9 231 aa7.83□□□□□ -1.16
HMBOX1-216ENST00000561377 TRMT2BQ96GJ1 504 aaKnown RBP7.83□□□□□ -1.16
HMBOX1-216ENST00000561377 COA3Q9Y2R0 106 aaPredicted RBP7.83□□□□□ -1.16
HMBOX1-216ENST00000561377 TBX1O43435 398 aa7.82□□□□□ -1.16
HMBOX1-216ENST00000561377 NOBOXO60393 691 aa7.82□□□□□ -1.16
HMBOX1-216ENST00000561377 FPR2P25090 351 aa7.82□□□□□ -1.16
HMBOX1-216ENST00000561377 KCNJ6P48051 423 aa7.82□□□□□ -1.16
HMBOX1-216ENST00000561377 SMAD4Q13485 552 aaKnown RBP7.82□□□□□ -1.16
HMBOX1-216ENST00000561377 SPATS1Q496A3 300 aa7.82□□□□□ -1.16
HMBOX1-216ENST00000561377 CD300LDQ6UXZ3 194 aa7.82□□□□□ -1.16
HMBOX1-216ENST00000561377 DBX2Q6ZNG2 339 aa7.82□□□□□ -1.16
HMBOX1-216ENST00000561377 CCDC103Q8IW40 242 aa7.82□□□□□ -1.16
HMBOX1-216ENST00000561377 TMEM169Q96HH4 297 aa7.82□□□□□ -1.16
HMBOX1-216ENST00000561377 GORASP1Q9BQQ3 440 aa7.82□□□□□ -1.16
HMBOX1-216ENST00000561377 C11orf84Q9BUA3 381 aaPredicted RBP7.82□□□□□ -1.16
HMBOX1-216ENST00000561377 NGRNQ9NPE2 291 aaKnown RBP7.82□□□□□ -1.16
HMBOX1-216ENST00000561377 TMEFF2Q9UIK5 374 aaPredicted RBP7.82□□□□□ -1.16
HMBOX1-216ENST00000561377 CNOT11Q9UKZ1 510 aaKnown RBP7.82□□□□□ -1.16
HMBOX1-216ENST00000561377 PALD1Q9ULE6 856 aa7.82□□□□□ -1.16
HMBOX1-216ENST00000561377 X6R8D5 127 aa7.82□□□□□ -1.16
HMBOX1-216ENST00000561377 ADRB1P08588 477 aa7.81□□□□□ -1.16
HMBOX1-216ENST00000561377 TCF3P15923 654 aa7.81□□□□□ -1.16
HMBOX1-216ENST00000561377 ETFBP38117 255 aa7.81□□□□□ -1.16
HMBOX1-216ENST00000561377 BCL6P41182 706 aa7.81□□□□□ -1.16
HMBOX1-216ENST00000561377 TESK1Q15569 626 aa7.81□□□□□ -1.16
HMBOX1-216ENST00000561377 CHRNA2Q15822 529 aa7.81□□□□□ -1.16
HMBOX1-216ENST00000561377 MILR1Q7Z6M3 343 aa7.81□□□□□ -1.16
HMBOX1-216ENST00000561377 FERMT3Q86UX7 667 aa7.81□□□□□ -1.16
HMBOX1-216ENST00000561377 ZNF761Q86XN6 746 aaPredicted RBP7.81□□□□□ -1.16
HMBOX1-216ENST00000561377 PPIL6Q8IXY8 311 aa7.81□□□□□ -1.16
HMBOX1-216ENST00000561377 KYQ8NBH2 561 aa7.81□□□□□ -1.16
HMBOX1-216ENST00000561377 BORCS6Q96GS4 357 aa7.81□□□□□ -1.16
HMBOX1-216ENST00000561377 EPN3Q9H201 632 aa7.81□□□□□ -1.16
HMBOX1-216ENST00000561377 AGRPO00253 132 aa7.8□□□□□ -1.16
HMBOX1-216ENST00000561377 CNR2P34972 360 aa7.8□□□□□ -1.16
HMBOX1-216ENST00000561377 THBS2P35442 1172 aa7.8□□□□□ -1.16
HMBOX1-216ENST00000561377 EFEMP1Q12805 493 aa7.8□□□□□ -1.16
HMBOX1-216ENST00000561377 EEPD1Q7L9B9 569 aa7.8□□□□□ -1.16
HMBOX1-216ENST00000561377 NLRP10Q86W26 655 aa7.8□□□□□ -1.16
HMBOX1-216ENST00000561377 FAM126BQ8IXS8 530 aa7.8□□□□□ -1.16
HMBOX1-216ENST00000561377 TTLL6Q8N841 843 aa7.8□□□□□ -1.16
HMBOX1-216ENST00000561377 KREMEN2Q8NCW0 462 aa7.8□□□□□ -1.16
HMBOX1-216ENST00000561377 ADAMTS17Q8TE56 1095 aa7.8□□□□□ -1.16
HMBOX1-216ENST00000561377 LNPKQ9C0E8 428 aa7.8□□□□□ -1.16
HMBOX1-216ENST00000561377 H7BY64 318 aa7.79□□□□□ -1.16
HMBOX1-216ENST00000561377 FGRP09769 529 aa7.79□□□□□ -1.16
HMBOX1-216ENST00000561377 RPL13P26373 211 aaKnown RBP7.79□□□□□ -1.16
HMBOX1-216ENST00000561377 LTBRP36941 435 aa7.79□□□□□ -1.16
HMBOX1-216ENST00000561377 GFRA1P56159 465 aa7.79□□□□□ -1.16
HMBOX1-216ENST00000561377 ARID5AQ03989 594 aa7.79□□□□□ -1.16
HMBOX1-216ENST00000561377 MRM1Q6IN84 353 aaKnown RBP7.79□□□□□ -1.16
HMBOX1-216ENST00000561377 FAM26EQ8N5C1 309 aa7.79□□□□□ -1.16
HMBOX1-216ENST00000561377 DDX1Q92499 740 aaKnown RBP7.79□□□□□ -1.16
HMBOX1-216ENST00000561377 YIPF4Q9BSR8 244 aa7.79□□□□□ -1.16
HMBOX1-216ENST00000561377 ZNF652Q9Y2D9 606 aa7.79□□□□□ -1.16
HMBOX1-216ENST00000561377 R3HCC1Q9Y3T6 440 aaKnown RBP7.79□□□□□ -1.16
HMBOX1-216ENST00000561377 K7ESM1 405 aa7.78□□□□□ -1.16
HMBOX1-216ENST00000561377 ARNTLO00327 626 aa7.78□□□□□ -1.16
HMBOX1-216ENST00000561377 NFKB2Q00653 900 aa7.78□□□□□ -1.16
HMBOX1-216ENST00000561377 LSAMPQ13449 338 aa7.78□□□□□ -1.16
HMBOX1-216ENST00000561377 PRSS53Q2L4Q9 553 aa7.78□□□□□ -1.16
HMBOX1-216ENST00000561377 RCBTB1Q8NDN9 531 aa7.78□□□□□ -1.16
HMBOX1-216ENST00000561377 MICAL1Q8TDZ2 1067 aa7.78□□□□□ -1.16
HMBOX1-216ENST00000561377 CHAMP1Q96JM3 812 aa7.78□□□□□ -1.16
HMBOX1-216ENST00000561377 ZNF408Q9H9D4 720 aa7.78□□□□□ -1.16
HMBOX1-216ENST00000561377 DUSP10Q9Y6W6 482 aa7.78□□□□□ -1.16
HMBOX1-216ENST00000561377 HGSO14964 777 aaPredicted RBP7.77□□□□□ -1.17
HMBOX1-216ENST00000561377 GJB6O95452 261 aa7.77□□□□□ -1.17
HMBOX1-216ENST00000561377 ITGA1P56199 1179 aa7.77□□□□□ -1.17
HMBOX1-216ENST00000561377 NKX3-2P78367 333 aa7.77□□□□□ -1.17
HMBOX1-216ENST00000561377 SF1Q15637 639 aaKnown RBP7.77□□□□□ -1.17
HMBOX1-216ENST00000561377 FAM26FQ5R3K3 315 aa7.77□□□□□ -1.17
HMBOX1-216ENST00000561377 TMEM145Q8NBT3 493 aa7.77□□□□□ -1.17
HMBOX1-216ENST00000561377 CCDC9Q9Y3X0 531 aaKnown RBP7.77□□□□□ -1.17
HMBOX1-216ENST00000561377 PCDHA2Q9Y5H9 948 aa7.77□□□□□ -1.17
HMBOX1-216ENST00000561377 KIAA2012Q0VF49 1180 aa7.76□□□□□ -1.17
HMBOX1-216ENST00000561377 SLC10A6Q3KNW5 377 aa7.76□□□□□ -1.17
HMBOX1-216ENST00000561377 RGL3Q3MIN7 710 aa7.76□□□□□ -1.17
HMBOX1-216ENST00000561377 FAM124AQ86V42 546 aa7.76□□□□□ -1.17
HMBOX1-216ENST00000561377 SYT3Q9BQG1 590 aa7.76□□□□□ -1.17
HMBOX1-216ENST00000561377 TINF2Q9BSI4 451 aa7.76□□□□□ -1.17
HMBOX1-216ENST00000561377 CLDND1Q9NY35 253 aa7.76□□□□□ -1.17
HMBOX1-216ENST00000561377 FBXL7Q9UJT9 491 aa7.76□□□□□ -1.17
HMBOX1-216ENST00000561377 STAT5AP42229 794 aa7.75□□□□□ -1.17
HMBOX1-216ENST00000561377 MAP4K2Q12851 820 aa7.75□□□□□ -1.17
HMBOX1-216ENST00000561377 ZNF827Q17R98 1081 aa7.75□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms