RNA–Protein interactions for RNA: ENST00000561276.5

LRRC28-221, Transcript of leucine rich repeat containing 28, humanhuman

TSL 5

Gene LRRC28, Length 967 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-221ENST00000561276 EHMT1Q9H9B1 1298 aa11.75□□□□□ -0.53
LRRC28-221ENST00000561276 BRMS1Q9HCU9 246 aa11.75□□□□□ -0.53
LRRC28-221ENST00000561276 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.75□□□□□ -0.53
LRRC28-221ENST00000561276 RPTORQ8N122 1335 aa11.75□□□□□ -0.53
LRRC28-221ENST00000561276 SYNGAP1Q96PV0 1343 aa11.75□□□□□ -0.53
LRRC28-221ENST00000561276 SYT1P21579 422 aa11.74□□□□□ -0.53
LRRC28-221ENST00000561276 EDNRBP24530 442 aa11.74□□□□□ -0.53
LRRC28-221ENST00000561276 MRPS9P82933 396 aaKnown RBP11.74□□□□□ -0.53
LRRC28-221ENST00000561276 NR5A1Q13285 461 aa11.74□□□□□ -0.53
LRRC28-221ENST00000561276 COL13A1Q5TAT6 717 aaPredicted RBP11.74□□□□□ -0.53
LRRC28-221ENST00000561276 PCNX4Q63HM2 1172 aa11.74□□□□□ -0.53
LRRC28-221ENST00000561276 EEPD1Q7L9B9 569 aa11.74□□□□□ -0.53
LRRC28-221ENST00000561276 KRT25Q7Z3Z0 450 aa11.74□□□□□ -0.53
LRRC28-221ENST00000561276 IL31RAQ8NI17 732 aa11.74□□□□□ -0.53
LRRC28-221ENST00000561276 MCOLN1Q9GZU1 580 aa11.74□□□□□ -0.53
LRRC28-221ENST00000561276 RTEL1Q9NZ71 1219 aa11.74□□□□□ -0.53
LRRC28-221ENST00000561276 CNPY2Q9Y2B0 182 aa11.74□□□□□ -0.53
LRRC28-221ENST00000561276 CCDC194A0A1B0GVG4 234 aa11.73□□□□□ -0.53
LRRC28-221ENST00000561276 EIF3JO75822 258 aaKnown RBP11.73□□□□□ -0.53
LRRC28-221ENST00000561276 INHAP05111 366 aa11.73□□□□□ -0.53
LRRC28-221ENST00000561276 ZNF865P0CJ78 1059 aaPredicted RBP11.73□□□□□ -0.53
LRRC28-221ENST00000561276 CNGA1P29973 690 aa11.73□□□□□ -0.53
LRRC28-221ENST00000561276 CCND2P30279 289 aa11.73□□□□□ -0.53
LRRC28-221ENST00000561276 SREBF1P36956 1147 aa11.73□□□□□ -0.53
LRRC28-221ENST00000561276 ACVR2BQ13705 512 aa11.73□□□□□ -0.53
LRRC28-221ENST00000561276 GNL2Q13823 731 aaKnown RBP11.73□□□□□ -0.53
LRRC28-221ENST00000561276 FRMPD4Q14CM0 1322 aa11.73□□□□□ -0.53
LRRC28-221ENST00000561276 NONOQ15233 471 aaKnown RBP eCLIP11.73□□□□□ -0.53
LRRC28-221ENST00000561276 EARS2Q5JPH6 523 aaKnown RBP11.73□□□□□ -0.53
LRRC28-221ENST00000561276 MCTP1Q6DN14 999 aa11.73□□□□□ -0.53
LRRC28-221ENST00000561276 PIK3AP1Q6ZUJ8 805 aa11.73□□□□□ -0.53
LRRC28-221ENST00000561276 TBCKQ8TEA7 893 aa11.73□□□□□ -0.53
LRRC28-221ENST00000561276 TNFRSF25Q93038 417 aa11.73□□□□□ -0.53
LRRC28-221ENST00000561276 FOXP1Q9H334 677 aaPredicted RBP11.73□□□□□ -0.53
LRRC28-221ENST00000561276 DAXXQ9UER7 740 aaPredicted RBP11.73□□□□□ -0.53
LRRC28-221ENST00000561276 FARP1Q9Y4F1 1045 aaPredicted RBP11.73□□□□□ -0.53
LRRC28-221ENST00000561276 DOCK5Q9H7D0 1870 aa11.72□□□□□ -0.53
LRRC28-221ENST00000561276 VPS37CA5D8V6 355 aaPredicted RBP11.72□□□□□ -0.53
LRRC28-221ENST00000561276 FAM205CA6NFA0 338 aa11.72□□□□□ -0.53
LRRC28-221ENST00000561276 STX6O43752 255 aa11.72□□□□□ -0.53
LRRC28-221ENST00000561276 EDIL3O43854 480 aa11.72□□□□□ -0.53
LRRC28-221ENST00000561276 STAM2O75886 525 aa11.72□□□□□ -0.53
LRRC28-221ENST00000561276 MYCP01106 439 aaPredicted RBP11.72□□□□□ -0.53
LRRC28-221ENST00000561276 CYP3A4P08684 503 aa11.72□□□□□ -0.53
LRRC28-221ENST00000561276 CYBAP13498 195 aa11.72□□□□□ -0.53
LRRC28-221ENST00000561276 U2AF2P26368 475 aaKnown RBP eCLIP11.72□□□□□ -0.531e-8■■■■■ 33
LRRC28-221ENST00000561276 ZNF76P36508 570 aa11.72□□□□□ -0.53
LRRC28-221ENST00000561276 USP11P51784 963 aa11.72□□□□□ -0.53
LRRC28-221ENST00000561276 ARHGAP4P98171 946 aa11.72□□□□□ -0.53
LRRC28-221ENST00000561276 INF2Q27J81 1249 aa11.72□□□□□ -0.53
LRRC28-221ENST00000561276 CCDC144BQ3MJ40 725 aa11.72□□□□□ -0.53
LRRC28-221ENST00000561276 MAP3K21Q5TCX8 1036 aa11.72□□□□□ -0.53
LRRC28-221ENST00000561276 TAPT1Q6NXT6 567 aa11.72□□□□□ -0.53
LRRC28-221ENST00000561276 XRRA1Q6P2D8 792 aa11.72□□□□□ -0.53
LRRC28-221ENST00000561276 SEPT14Q6ZU15 432 aa11.72□□□□□ -0.53
LRRC28-221ENST00000561276 TRPV1Q8NER1 839 aa11.72□□□□□ -0.53
LRRC28-221ENST00000561276 CRYGNQ8WXF5 182 aa11.72□□□□□ -0.53
LRRC28-221ENST00000561276 KATNBL1Q9H079 304 aa11.72□□□□□ -0.53
LRRC28-221ENST00000561276 HMX1Q9NP08 348 aaPredicted RBP11.72□□□□□ -0.53
LRRC28-221ENST00000561276 VTA1Q9NP79 307 aa11.72□□□□□ -0.53
LRRC28-221ENST00000561276 PDGFCQ9NRA1 345 aa11.72□□□□□ -0.53
LRRC28-221ENST00000561276 NRBP1Q9UHY1 535 aa11.72□□□□□ -0.53
LRRC28-221ENST00000561276 KIF28PB7ZC32 967 aa11.71□□□□□ -0.53
LRRC28-221ENST00000561276 RGS20O76081 388 aa11.71□□□□□ -0.53
LRRC28-221ENST00000561276 CCND3P30281 292 aaPredicted RBP11.71□□□□□ -0.53
LRRC28-221ENST00000561276 MTFR1Q15390 333 aa11.71□□□□□ -0.53
LRRC28-221ENST00000561276 IQSEC1Q6DN90 963 aa11.71□□□□□ -0.53
LRRC28-221ENST00000561276 NOSTRINQ8IVI9 506 aa11.71□□□□□ -0.53
LRRC28-221ENST00000561276 FBXO16Q8IX29 292 aaPredicted RBP11.71□□□□□ -0.53
LRRC28-221ENST00000561276 CYP2W1Q8TAV3 490 aa11.71□□□□□ -0.53
LRRC28-221ENST00000561276 MXRA8Q9BRK3 442 aa11.71□□□□□ -0.53
LRRC28-221ENST00000561276 WDR11Q9BZH6 1224 aa11.71□□□□□ -0.53
LRRC28-221ENST00000561276 ZHX1Q9UKY1 873 aaPredicted RBP11.71□□□□□ -0.53
LRRC28-221ENST00000561276 UBIAD1Q9Y5Z9 338 aa11.71□□□□□ -0.53
LRRC28-221ENST00000561276 CCL5P13501 91 aa11.7□□□□□ -0.54
LRRC28-221ENST00000561276 PDIA4P13667 645 aaKnown RBP11.7□□□□□ -0.54
LRRC28-221ENST00000561276 ITGB5P18084 799 aa11.7□□□□□ -0.54
LRRC28-221ENST00000561276 ADCYAP1R1P41586 468 aa11.7□□□□□ -0.54
LRRC28-221ENST00000561276 TNFAIP2Q03169 654 aa11.7□□□□□ -0.54
LRRC28-221ENST00000561276 CEP55Q53EZ4 464 aa11.7□□□□□ -0.54
LRRC28-221ENST00000561276 NEK8Q86SG6 692 aa11.7□□□□□ -0.54
LRRC28-221ENST00000561276 SCFD2Q8WU76 684 aa11.7□□□□□ -0.54
LRRC28-221ENST00000561276 ARMC5Q96C12 935 aa11.7□□□□□ -0.54
LRRC28-221ENST00000561276 ZNF333Q96JL9 665 aa11.7□□□□□ -0.54
LRRC28-221ENST00000561276 INPP4AQ96PE3 977 aaPredicted RBP11.7□□□□□ -0.54
LRRC28-221ENST00000561276 RNF208Q9H0X6 261 aa11.7□□□□□ -0.54
LRRC28-221ENST00000561276 UNC93B1Q9H1C4 597 aa11.7□□□□□ -0.54
LRRC28-221ENST00000561276 JADE2Q9NQC1 790 aa11.7□□□□□ -0.54
LRRC28-221ENST00000561276 FAM184BQ9ULE4 1060 aa11.7□□□□□ -0.54
LRRC28-221ENST00000561276 MYH15Q9Y2K3 1946 aa11.7□□□□□ -0.54
LRRC28-221ENST00000561276 FRMPD3Q5JV73 1810 aa11.7□□□□□ -0.54
LRRC28-221ENST00000561276 C11orf97A0A1B0GVM6 126 aaPredicted RBP11.69□□□□□ -0.54
LRRC28-221ENST00000561276 RBM47A0AV96 593 aaKnown RBP11.69□□□□□ -0.54
LRRC28-221ENST00000561276 SPATA31C2B4DYI2 1134 aa11.69□□□□□ -0.54
LRRC28-221ENST00000561276 FAM86B1E9PN63 330 aa11.69□□□□□ -0.54
LRRC28-221ENST00000561276 MEIS1O00470 390 aa11.69□□□□□ -0.54
LRRC28-221ENST00000561276 MAFGO15525 162 aa11.69□□□□□ -0.54
LRRC28-221ENST00000561276 SEPT4O43236 478 aa11.69□□□□□ -0.54
LRRC28-221ENST00000561276 FAM86B2P0C5J1 330 aa11.69□□□□□ -0.54
LRRC28-221ENST00000561276 TXNP10599 105 aaKnown RBP11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms