RNA–Protein interactions for RNA: ENST00000561271.1

CDC42BPB-208, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 3

Gene CDC42BPB, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-208ENST00000561271 PGM5Q15124 567 aa19.9■□□□□ 0.78
CDC42BPB-208ENST00000561271 FAM47CQ5HY64 1035 aa19.9■□□□□ 0.78
CDC42BPB-208ENST00000561271 RRP36Q96EU6 259 aaKnown RBP19.9■□□□□ 0.78
CDC42BPB-208ENST00000561271 TCEANC2Q96MN5 208 aa19.9■□□□□ 0.78
CDC42BPB-208ENST00000561271 BUD13Q9BRD0 619 aaKnown RBP eCLIP19.9■□□□□ 0.78
CDC42BPB-208ENST00000561271 NOC4LQ9BVI4 516 aaKnown RBP19.9■□□□□ 0.78
CDC42BPB-208ENST00000561271 SEZ6LQ9BYH1 1024 aa19.9■□□□□ 0.78
CDC42BPB-208ENST00000561271 MTMR10Q9NXD2 777 aa19.9■□□□□ 0.78
CDC42BPB-208ENST00000561271 MAP3K20Q9NYL2 800 aaKnown RBP19.9■□□□□ 0.78
CDC42BPB-208ENST00000561271 MRVI1Q9Y6F6 885 aa19.9■□□□□ 0.78
CDC42BPB-208ENST00000561271 EIF3JO75822 258 aaKnown RBP19.89■□□□□ 0.77
CDC42BPB-208ENST00000561271 ACRP10323 421 aa19.89■□□□□ 0.77
CDC42BPB-208ENST00000561271 LIFRP42702 1097 aa19.89■□□□□ 0.77
CDC42BPB-208ENST00000561271 NBPF20Q3BBV1 942 aa19.89■□□□□ 0.77
CDC42BPB-208ENST00000561271 MICU3Q86XE3 530 aa19.89■□□□□ 0.77
CDC42BPB-208ENST00000561271 RASEFQ8IZ41 740 aa19.89■□□□□ 0.77
CDC42BPB-208ENST00000561271 TMEM199Q8N511 208 aa19.89■□□□□ 0.77
CDC42BPB-208ENST00000561271 ZFP91Q96JP5 570 aaPredicted RBP19.89■□□□□ 0.77
CDC42BPB-208ENST00000561271 FAM161BQ96MY7 647 aa19.89■□□□□ 0.77
CDC42BPB-208ENST00000561271 SEC63Q9UGP8 760 aaKnown RBP19.89■□□□□ 0.77
CDC42BPB-208ENST00000561271 DDX41Q9UJV9 622 aaKnown RBP19.89■□□□□ 0.77
CDC42BPB-208ENST00000561271 SLC12A7Q9Y666 1083 aa19.89■□□□□ 0.77
CDC42BPB-208ENST00000561271 RGS20O76081 388 aa19.88■□□□□ 0.77
CDC42BPB-208ENST00000561271 CHMP4BP1P59074 171 aa19.88■□□□□ 0.77
CDC42BPB-208ENST00000561271 C16orf59Q7L2K0 433 aa19.88■□□□□ 0.77
CDC42BPB-208ENST00000561271 TMTC2Q8N394 836 aa19.88■□□□□ 0.77
CDC42BPB-208ENST00000561271 SRBD1Q8N5C6 995 aaKnown RBP19.88■□□□□ 0.77
CDC42BPB-208ENST00000561271 SAMD3Q8N6K7 520 aa19.88■□□□□ 0.77
CDC42BPB-208ENST00000561271 NEK1Q96PY6 1258 aa19.88■□□□□ 0.77
CDC42BPB-208ENST00000561271 WNT8AQ9H1J5 351 aa19.88■□□□□ 0.77
CDC42BPB-208ENST00000561271 LOXHD1Q8IVV2 1947 aa19.88■□□□□ 0.77
CDC42BPB-208ENST00000561271 MICAL3Q7RTP6 2002 aa19.87■□□□□ 0.77
CDC42BPB-208ENST00000561271 FRMPD4Q14CM0 1322 aa19.87■□□□□ 0.77
CDC42BPB-208ENST00000561271 SORBS3O60504 671 aa19.87■□□□□ 0.77
CDC42BPB-208ENST00000561271 KPNA6O60684 536 aa19.87■□□□□ 0.77
CDC42BPB-208ENST00000561271 CALM1P0DP23 149 aa19.87■□□□□ 0.77
CDC42BPB-208ENST00000561271 CALM2P0DP24 149 aa19.87■□□□□ 0.77
CDC42BPB-208ENST00000561271 CALM3P0DP25 149 aa19.87■□□□□ 0.77
CDC42BPB-208ENST00000561271 CYP2C9P11712 490 aa19.87■□□□□ 0.77
CDC42BPB-208ENST00000561271 CCND2P30279 289 aa19.87■□□□□ 0.77
CDC42BPB-208ENST00000561271 GNAQP50148 359 aa19.87■□□□□ 0.77
CDC42BPB-208ENST00000561271 CCL23P55773 120 aa19.87■□□□□ 0.77
CDC42BPB-208ENST00000561271 SMAD3P84022 425 aaKnown RBP19.87■□□□□ 0.77
CDC42BPB-208ENST00000561271 ADCK5Q3MIX3 580 aa19.87■□□□□ 0.77
CDC42BPB-208ENST00000561271 TMEM240Q5SV17 173 aa19.87■□□□□ 0.77
CDC42BPB-208ENST00000561271 ZNF697Q5TEC3 545 aa19.87■□□□□ 0.77
CDC42BPB-208ENST00000561271 SGMS1Q86VZ5 419 aa19.87■□□□□ 0.77
CDC42BPB-208ENST00000561271 LZTS2Q9BRK4 669 aa19.87■□□□□ 0.77
CDC42BPB-208ENST00000561271 SIP14410 1827 aa19.86■□□□□ 0.77
CDC42BPB-208ENST00000561271 hCG_1642624A0A1W2PR95 340 aa19.86■□□□□ 0.77
CDC42BPB-208ENST00000561271 SMARCA1P28370 1054 aa19.86■□□□□ 0.77
CDC42BPB-208ENST00000561271 FAM109BQ6ICB4 259 aaPredicted RBP19.86■□□□□ 0.77
CDC42BPB-208ENST00000561271 NFRKBQ6P4R8 1299 aa19.86■□□□□ 0.77
CDC42BPB-208ENST00000561271 PSRC1Q6PGN9 363 aaPredicted RBP19.86■□□□□ 0.77
CDC42BPB-208ENST00000561271 TMTC3Q6ZXV5 915 aa19.86■□□□□ 0.77
CDC42BPB-208ENST00000561271 VSIG10LQ86VR7 867 aa19.86■□□□□ 0.77
CDC42BPB-208ENST00000561271 GPKOWQ92917 476 aaPredicted RBP eCLIP19.86■□□□□ 0.77
CDC42BPB-208ENST00000561271 IL23AQ9NPF7 189 aa19.86■□□□□ 0.77
CDC42BPB-208ENST00000561271 ZNF286BP0CG31 522 aa19.85■□□□□ 0.77
CDC42BPB-208ENST00000561271 UBA1P22314 1058 aaKnown RBP19.85■□□□□ 0.77
CDC42BPB-208ENST00000561271 APOA5Q6Q788 366 aa19.85■□□□□ 0.77
CDC42BPB-208ENST00000561271 USP17L6PQ6QN14 398 aa19.85■□□□□ 0.77
CDC42BPB-208ENST00000561271 ZNF365Q70YC5 407 aa19.85■□□□□ 0.77
CDC42BPB-208ENST00000561271 CCDC82Q8N4S0 544 aa19.85■□□□□ 0.77
CDC42BPB-208ENST00000561271 EMID1Q96A84 441 aaPredicted RBP19.85■□□□□ 0.77
CDC42BPB-208ENST00000561271 SCLYQ96I15 445 aa19.85■□□□□ 0.77
CDC42BPB-208ENST00000561271 GUCD1Q96NT3 240 aa19.85■□□□□ 0.77
CDC42BPB-208ENST00000561271 MYH9P35579 1960 aaKnown RBP19.84■□□□□ 0.77
CDC42BPB-208ENST00000561271 CNTNAP5Q8WYK1 1306 aa19.84■□□□□ 0.77
CDC42BPB-208ENST00000561271 GGPS1O95749 300 aa19.84■□□□□ 0.77
CDC42BPB-208ENST00000561271 NEFLP07196 543 aa19.84■□□□□ 0.77
CDC42BPB-208ENST00000561271 DHX37Q8IY37 1157 aaKnown RBP19.84■□□□□ 0.77
CDC42BPB-208ENST00000561271 FANCBQ8NB91 859 aa19.84■□□□□ 0.77
CDC42BPB-208ENST00000561271 SMARCC2Q8TAQ2 1214 aa19.84■□□□□ 0.77
CDC42BPB-208ENST00000561271 KAT2BQ92831 832 aa19.84■□□□□ 0.77
CDC42BPB-208ENST00000561271 EYSQ5T1H1 3165 aa19.83■□□□□ 0.77
CDC42BPB-208ENST00000561271 SUPT20HL2P0C7V6 817 aa19.83■□□□□ 0.77
CDC42BPB-208ENST00000561271 CASTP20810 708 aaKnown RBP19.83■□□□□ 0.77
CDC42BPB-208ENST00000561271 MRPS9P82933 396 aaKnown RBP19.83■□□□□ 0.77
CDC42BPB-208ENST00000561271 EXOSC10Q01780 885 aaKnown RBP19.83■□□□□ 0.77
CDC42BPB-208ENST00000561271 SP2Q02086 613 aa19.83■□□□□ 0.77
CDC42BPB-208ENST00000561271 LAMC2Q13753 1193 aa19.83■□□□□ 0.77
CDC42BPB-208ENST00000561271 DGKDQ16760 1214 aa19.83■□□□□ 0.77
CDC42BPB-208ENST00000561271 TSGA10IPQ3SY00 556 aa19.83■□□□□ 0.77
CDC42BPB-208ENST00000561271 DHX32Q7L7V1 743 aaKnown RBP19.83■□□□□ 0.77
CDC42BPB-208ENST00000561271 PPTC7Q8NI37 304 aa19.83■□□□□ 0.77
CDC42BPB-208ENST00000561271 CUL5Q93034 780 aa19.83■□□□□ 0.77
CDC42BPB-208ENST00000561271 TTYH1Q9H313 450 aaPredicted RBP19.83■□□□□ 0.77
CDC42BPB-208ENST00000561271 BRPF3Q9ULD4 1205 aa19.83■□□□□ 0.77
CDC42BPB-208ENST00000561271 STXBP5LQ9Y2K9 1186 aa19.83■□□□□ 0.77
CDC42BPB-208ENST00000561271 MEIS2O14770 477 aa19.82■□□□□ 0.76
CDC42BPB-208ENST00000561271 CPA1P15085 419 aa19.82■□□□□ 0.76
CDC42BPB-208ENST00000561271 PTPN11Q06124 597 aaPredicted RBP19.82■□□□□ 0.76
CDC42BPB-208ENST00000561271 KRT32Q14532 448 aa19.82■□□□□ 0.76
CDC42BPB-208ENST00000561271 CELF3Q5SZQ8 465 aaKnown RBP19.82■□□□□ 0.76
CDC42BPB-208ENST00000561271 RASIP1Q5U651 963 aa19.82■□□□□ 0.76
CDC42BPB-208ENST00000561271 MYSM1Q5VVJ2 828 aa19.82■□□□□ 0.76
CDC42BPB-208ENST00000561271 KCNV1Q6PIU1 500 aa19.82■□□□□ 0.76
CDC42BPB-208ENST00000561271 SYNE3Q6ZMZ3 975 aa19.82■□□□□ 0.76
CDC42BPB-208ENST00000561271 NOD1Q9Y239 953 aa19.82■□□□□ 0.76
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