RNA–Protein interactions for RNA: ENST00000561266.5

TPM1-230, Transcript of tropomyosin 1, humanhuman

TSL 3

Gene TPM1, Length 671 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-230ENST00000561266 A0A1W2PQY0 241 aa15.99■□□□□ 0.15
TPM1-230ENST00000561266 SMCO2A6NFE2 343 aa15.99■□□□□ 0.15
TPM1-230ENST00000561266 H0YGN5 161 aa15.99■□□□□ 0.15
TPM1-230ENST00000561266 PFKFB2O60825 505 aa15.99■□□□□ 0.15
TPM1-230ENST00000561266 EIF3JO75822 258 aaKnown RBP15.99■□□□□ 0.15
TPM1-230ENST00000561266 ASGR1P07306 291 aa15.99■□□□□ 0.15
TPM1-230ENST00000561266 SP2Q02086 613 aa15.99■□□□□ 0.15
TPM1-230ENST00000561266 GNASQ5JWF2 1037 aa15.99■□□□□ 0.15
TPM1-230ENST00000561266 RNF180Q86T96 592 aa15.99■□□□□ 0.15
TPM1-230ENST00000561266 HTATIP2Q9BUP3 242 aa15.99■□□□□ 0.15
TPM1-230ENST00000561266 RIC8AQ9NPQ8 531 aa15.99■□□□□ 0.15
TPM1-230ENST00000561266 RTEL1Q9NZ71 1219 aa15.99■□□□□ 0.15
TPM1-230ENST00000561266 TELO2Q9Y4R8 837 aa15.99■□□□□ 0.15
TPM1-230ENST00000561266 SORBS3O60504 671 aa15.98■□□□□ 0.15
TPM1-230ENST00000561266 TXNP10599 105 aaKnown RBP15.98■□□□□ 0.15
TPM1-230ENST00000561266 RBM25P49756 843 aaKnown RBP15.98■□□□□ 0.15
TPM1-230ENST00000561266 CLK2P49760 499 aaKnown RBP15.98■□□□□ 0.15
TPM1-230ENST00000561266 FSCN1Q16658 493 aaKnown RBP15.98■□□□□ 0.15
TPM1-230ENST00000561266 C7orf61Q8IZ16 206 aa15.98■□□□□ 0.15
TPM1-230ENST00000561266 SCFD2Q8WU76 684 aa15.98■□□□□ 0.15
TPM1-230ENST00000561266 PPP1R13LQ8WUF5 828 aa15.98■□□□□ 0.15
TPM1-230ENST00000561266 TSEN34Q9BSV6 310 aaKnown RBP15.98■□□□□ 0.15
TPM1-230ENST00000561266 RNF26Q9BY78 433 aaPredicted RBP15.98■□□□□ 0.15
TPM1-230ENST00000561266 VPS54Q9P1Q0 977 aa15.98■□□□□ 0.15
TPM1-230ENST00000561266 DDX41Q9UJV9 622 aaKnown RBP15.98■□□□□ 0.15
TPM1-230ENST00000561266 PCDHA6Q9UN73 950 aa15.98■□□□□ 0.15
TPM1-230ENST00000561266 Q9Y3F1 56 aa15.98■□□□□ 0.15
TPM1-230ENST00000561266 PCDHA8Q9Y5H6 950 aa15.98■□□□□ 0.15
TPM1-230ENST00000561266 GRIN2DO15399 1336 aa15.97■□□□□ 0.15
TPM1-230ENST00000561266 ADCY7P51828 1080 aa15.97■□□□□ 0.15
TPM1-230ENST00000561266 RTP1P59025 263 aa15.97■□□□□ 0.15
TPM1-230ENST00000561266 ARHGAP1Q07960 439 aa15.97■□□□□ 0.15
TPM1-230ENST00000561266 SNX17Q15036 470 aa15.97■□□□□ 0.15
TPM1-230ENST00000561266 TRIM60Q495X7 471 aa15.97■□□□□ 0.15
TPM1-230ENST00000561266 CXCL17Q6UXB2 119 aa15.97■□□□□ 0.15
TPM1-230ENST00000561266 OR6J1Q8NGC5 347 aa15.97■□□□□ 0.15
TPM1-230ENST00000561266 RASGRP4Q8TDF6 673 aa15.97■□□□□ 0.15
TPM1-230ENST00000561266 CUL5Q93034 780 aa15.97■□□□□ 0.15
TPM1-230ENST00000561266 SLKQ9H2G2 1235 aaPredicted RBP15.97■□□□□ 0.15
TPM1-230ENST00000561266 GJB4Q9NTQ9 266 aa15.97■□□□□ 0.15
TPM1-230ENST00000561266 B4DLN1 442 aa15.96■□□□□ 0.15
TPM1-230ENST00000561266 EDIL3O43854 480 aa15.96■□□□□ 0.15
TPM1-230ENST00000561266 EVI5O60447 810 aa15.96■□□□□ 0.15
TPM1-230ENST00000561266 SYN1P17600 705 aa15.96■□□□□ 0.15
TPM1-230ENST00000561266 CCND2P30279 289 aa15.96■□□□□ 0.15
TPM1-230ENST00000561266 MRPL12P52815 198 aaKnown RBP15.96■□□□□ 0.15
TPM1-230ENST00000561266 SSRP1Q08945 709 aaKnown RBP15.96■□□□□ 0.15
TPM1-230ENST00000561266 TTLL4Q14679 1199 aa15.96■□□□□ 0.15
TPM1-230ENST00000561266 PCNX4Q63HM2 1172 aa15.96■□□□□ 0.15
TPM1-230ENST00000561266 PPP1R18Q6NYC8 613 aa15.96■□□□□ 0.15
TPM1-230ENST00000561266 MPHOSPH6Q99547 160 aaKnown RBP15.96■□□□□ 0.15
TPM1-230ENST00000561266 ZMYND12Q9H0C1 365 aa15.96■□□□□ 0.15
TPM1-230ENST00000561266 AP5M1Q9H0R1 490 aa15.96■□□□□ 0.15
TPM1-230ENST00000561266 ZMYND8Q9ULU4 1186 aaPredicted RBP15.96■□□□□ 0.15
TPM1-230ENST00000561266 SCN10AQ9Y5Y9 1956 aa15.96■□□□□ 0.15
TPM1-230ENST00000561266 EIF5BO60841 1220 aaKnown RBP15.95■□□□□ 0.14
TPM1-230ENST00000561266 FDPSP14324 419 aaKnown RBP15.95■□□□□ 0.14
TPM1-230ENST00000561266 ITGB5P18084 799 aa15.95■□□□□ 0.14
TPM1-230ENST00000561266 PSMC6P62333 389 aa15.95■□□□□ 0.14
TPM1-230ENST00000561266 NPY5RQ15761 445 aa15.95■□□□□ 0.14
TPM1-230ENST00000561266 JAKMIP3Q5VZ66 844 aa15.95■□□□□ 0.14
TPM1-230ENST00000561266 SH3RF1Q7Z6J0 888 aa15.95■□□□□ 0.14
TPM1-230ENST00000561266 CYP2W1Q8TAV3 490 aa15.95■□□□□ 0.14
TPM1-230ENST00000561266 AFG1LQ8WV93 481 aa15.95■□□□□ 0.14
TPM1-230ENST00000561266 INPP4AQ96PE3 977 aaPredicted RBP15.95■□□□□ 0.14
TPM1-230ENST00000561266 ATP11BQ9Y2G3 1177 aa15.95■□□□□ 0.14
TPM1-230ENST00000561266 ESYT2A0FGR8 921 aa15.94■□□□□ 0.14
TPM1-230ENST00000561266 MOXD2PA6NHM9 499 aa15.94■□□□□ 0.14
TPM1-230ENST00000561266 RBAK-RBAKDNI3L0D1 243 aa15.94■□□□□ 0.14
TPM1-230ENST00000561266 hCG_1984214I3L0E3 225 aa15.94■□□□□ 0.14
TPM1-230ENST00000561266 CPLX1O14810 134 aa15.94■□□□□ 0.14
TPM1-230ENST00000561266 NKRFO15226 690 aaKnown RBP eCLIP15.94■□□□□ 0.14
TPM1-230ENST00000561266 ATP9AO75110 1047 aa15.94■□□□□ 0.14
TPM1-230ENST00000561266 CD2BP2O95400 341 aaKnown RBP15.94■□□□□ 0.14
TPM1-230ENST00000561266 UBA1P22314 1058 aaKnown RBP15.94■□□□□ 0.14
TPM1-230ENST00000561266 CDK7P50613 346 aa15.94■□□□□ 0.14
TPM1-230ENST00000561266 ANKRD1Q15327 319 aa15.94■□□□□ 0.14
TPM1-230ENST00000561266 ZNF713Q8N859 430 aaPredicted RBP15.94■□□□□ 0.14
TPM1-230ENST00000561266 PCSK9Q8NBP7 692 aaKnown RBP15.94■□□□□ 0.14
TPM1-230ENST00000561266 GTF3C6Q969F1 213 aa15.94■□□□□ 0.14
TPM1-230ENST00000561266 ANO3Q9BYT9 981 aa15.94■□□□□ 0.14
TPM1-230ENST00000561266 BACH2Q9BYV9 841 aa15.94■□□□□ 0.14
TPM1-230ENST00000561266 SPC25Q9HBM1 224 aa15.94■□□□□ 0.14
TPM1-230ENST00000561266 UBIAD1Q9Y5Z9 338 aa15.94■□□□□ 0.14
TPM1-230ENST00000561266 MRVI1Q9Y6F6 885 aa15.94■□□□□ 0.14
TPM1-230ENST00000561266 LTBP2Q14767 1821 aa15.94■□□□□ 0.14
TPM1-230ENST00000561266 A6NJR5 290 aa15.93■□□□□ 0.14
TPM1-230ENST00000561266 SPATA31C2B4DYI2 1134 aa15.93■□□□□ 0.14
TPM1-230ENST00000561266 JAK2O60674 1132 aa15.93■□□□□ 0.14
TPM1-230ENST00000561266 GH1P01241 217 aa15.93■□□□□ 0.14
TPM1-230ENST00000561266 MYL3P08590 195 aa15.93■□□□□ 0.14
TPM1-230ENST00000561266 ICAM3P32942 547 aa15.93■□□□□ 0.14
TPM1-230ENST00000561266 PURAQ00577 322 aaKnown RBP15.93■□□□□ 0.14
TPM1-230ENST00000561266 AKAP17AQ02040 695 aaKnown RBP15.93■□□□□ 0.14
TPM1-230ENST00000561266 TLE2Q04725 743 aa15.93■□□□□ 0.14
TPM1-230ENST00000561266 PRPF38BQ5VTL8 546 aaKnown RBP15.93■□□□□ 0.14
TPM1-230ENST00000561266 C1orf53Q5VUE5 145 aa15.93■□□□□ 0.14
TPM1-230ENST00000561266 MYSM1Q5VVJ2 828 aa15.93■□□□□ 0.14
TPM1-230ENST00000561266 NSUN7Q8NE18 718 aaKnown RBP15.93■□□□□ 0.14
TPM1-230ENST00000561266 CRYGNQ8WXF5 182 aa15.93■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms