RNA–Protein interactions for RNA: ENST00000561206.1

USP8-216, Transcript of ubiquitin specific peptidase 8, humanhuman

TSL 2

Gene USP8, Length 556 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP8-216ENST00000561206 SEC61A2Q9H9S3 476 aa6.07□□□□□ -1.44
USP8-216ENST00000561206 GULP1Q9UBP9 304 aa6.07□□□□□ -1.44
USP8-216ENST00000561206 SGSM2O43147 1006 aa6.06□□□□□ -1.44
USP8-216ENST00000561206 NTRK1P04629 796 aa6.06□□□□□ -1.44
USP8-216ENST00000561206 PTH1RQ03431 593 aa6.06□□□□□ -1.44
USP8-216ENST00000561206 CR1LQ2VPA4 569 aa6.06□□□□□ -1.44
USP8-216ENST00000561206 PCSK4Q6UW60 755 aa6.06□□□□□ -1.44
USP8-216ENST00000561206 LDLRAD3Q86YD5 345 aa6.06□□□□□ -1.44
USP8-216ENST00000561206 PLEKHO2Q8TD55 490 aa6.06□□□□□ -1.44
USP8-216ENST00000561206 ZNF296Q8WUU4 475 aaPredicted RBP6.06□□□□□ -1.44
USP8-216ENST00000561206 CRAMP1Q96RY5 1269 aa6.06□□□□□ -1.44
USP8-216ENST00000561206 MCMBPQ9BTE3 642 aa6.06□□□□□ -1.44
USP8-216ENST00000561206 DIS3Q9Y2L1 958 aaKnown RBP6.06□□□□□ -1.44
USP8-216ENST00000561206 PDIA4P13667 645 aaKnown RBP6.05□□□□□ -1.44
USP8-216ENST00000561206 TAB3Q8N5C8 712 aaPredicted RBP6.05□□□□□ -1.44
USP8-216ENST00000561206 AP5M1Q9H0R1 490 aa6.05□□□□□ -1.44
USP8-216ENST00000561206 UBP1Q9NZI7 540 aa6.05□□□□□ -1.44
USP8-216ENST00000561206 ADAMTS1Q9UHI8 967 aa6.05□□□□□ -1.44
USP8-216ENST00000561206 B4GALT4O60513 344 aa6.04□□□□□ -1.44
USP8-216ENST00000561206 CNOT4O95628 575 aaKnown RBP6.04□□□□□ -1.44
USP8-216ENST00000561206 ITGA4P13612 1032 aa6.04□□□□□ -1.44
USP8-216ENST00000561206 SLC6A11P48066 632 aa6.04□□□□□ -1.44
USP8-216ENST00000561206 MLLT6P55198 1093 aaPredicted RBP6.04□□□□□ -1.44
USP8-216ENST00000561206 APOBRQ0VD83 1088 aa6.04□□□□□ -1.44
USP8-216ENST00000561206 MRPL58Q14197 206 aaKnown RBP6.04□□□□□ -1.44
USP8-216ENST00000561206 CCDC27Q2M243 656 aa6.04□□□□□ -1.44
USP8-216ENST00000561206 SEZ6Q53EL9 994 aa6.04□□□□□ -1.44
USP8-216ENST00000561206 KRTAP5-6Q6L8G9 129 aaPredicted RBP6.04□□□□□ -1.44
USP8-216ENST00000561206 GK5Q6ZS86 529 aa6.04□□□□□ -1.44
USP8-216ENST00000561206 HS2ST1Q7LGA3 356 aa6.04□□□□□ -1.44
USP8-216ENST00000561206 ZCCHC14Q8WYQ9 949 aaKnown RBP6.04□□□□□ -1.44
USP8-216ENST00000561206 NOL6Q9H6R4 1146 aaKnown RBP6.04□□□□□ -1.44
USP8-216ENST00000561206 ZNF451Q9Y4E5 1061 aa6.04□□□□□ -1.44
USP8-216ENST00000561206 TRBV23OR9-2A0A075B6M9 112 aa6.03□□□□□ -1.44
USP8-216ENST00000561206 PLSCR1O15162 318 aa6.03□□□□□ -1.44
USP8-216ENST00000561206 FOXS1O43638 330 aa6.03□□□□□ -1.44
USP8-216ENST00000561206 CYP7B1O75881 506 aa6.03□□□□□ -1.44
USP8-216ENST00000561206 FBLP22087 321 aaKnown RBP6.03□□□□□ -1.44
USP8-216ENST00000561206 LSM12Q3MHD2 195 aaKnown RBP6.03□□□□□ -1.44
USP8-216ENST00000561206 NRN1LQ496H8 165 aa6.03□□□□□ -1.44
USP8-216ENST00000561206 USP39Q53GS9 565 aaKnown RBP6.03□□□□□ -1.44
USP8-216ENST00000561206 TCTN3Q6NUS6 607 aa6.03□□□□□ -1.44
USP8-216ENST00000561206 DPY19L2P1Q6NXN4 242 aa6.03□□□□□ -1.44
USP8-216ENST00000561206 SEC14L1Q92503 715 aa6.03□□□□□ -1.44
USP8-216ENST00000561206 ZG16BQ96DA0 208 aa6.03□□□□□ -1.44
USP8-216ENST00000561206 GGT7Q9UJ14 662 aa6.03□□□□□ -1.44
USP8-216ENST00000561206 ADAM29Q9UKF5 820 aa6.03□□□□□ -1.44
USP8-216ENST00000561206 LMO1P25800 156 aa6.02□□□□□ -1.45
USP8-216ENST00000561206 RGS19P49795 217 aa6.02□□□□□ -1.45
USP8-216ENST00000561206 ZNF165P49910 485 aa6.02□□□□□ -1.45
USP8-216ENST00000561206 NFATC3Q12968 1075 aa6.02□□□□□ -1.45
USP8-216ENST00000561206 TDRD10Q5VZ19 366 aaKnown RBP6.02□□□□□ -1.45
USP8-216ENST00000561206 ZDHHC15Q96MV8 337 aa6.02□□□□□ -1.45
USP8-216ENST00000561206 ADOQ96SZ5 270 aa6.02□□□□□ -1.45
USP8-216ENST00000561206 C7orf72A4D263 438 aa6.01□□□□□ -1.45
USP8-216ENST00000561206 NKX3-2P78367 333 aa6.01□□□□□ -1.45
USP8-216ENST00000561206 SLITRK4Q8IW52 837 aa6.01□□□□□ -1.45
USP8-216ENST00000561206 AGAP2Q99490 1192 aa6.01□□□□□ -1.45
USP8-216ENST00000561206 U2SURPO15042 1029 aaKnown RBP6□□□□□ -1.45
USP8-216ENST00000561206 NPHS1O60500 1241 aa6□□□□□ -1.45
USP8-216ENST00000561206 FUCA1P04066 466 aa6□□□□□ -1.45
USP8-216ENST00000561206 MCM4P33991 863 aa6□□□□□ -1.45
USP8-216ENST00000561206 STAT5AP42229 794 aa6□□□□□ -1.45
USP8-216ENST00000561206 CPNE8Q86YQ8 564 aa6□□□□□ -1.45
USP8-216ENST00000561206 EXTL1Q92935 676 aa6□□□□□ -1.45
USP8-216ENST00000561206 WRNIP1Q96S55 665 aa6□□□□□ -1.45
USP8-216ENST00000561206 NT5C1AQ9BXI3 368 aa6□□□□□ -1.45
USP8-216ENST00000561206 CSRNP2Q9H175 543 aa6□□□□□ -1.45
USP8-216ENST00000561206 BARX1Q9HBU1 254 aaPredicted RBP6□□□□□ -1.45
USP8-216ENST00000561206 PAMP19021 973 aa5.99□□□□□ -1.45
USP8-216ENST00000561206 SEPHS1P49903 392 aa5.99□□□□□ -1.45
USP8-216ENST00000561206 KRTAP10-9P60411 292 aa5.99□□□□□ -1.45
USP8-216ENST00000561206 CLIC6Q96NY7 704 aa5.99□□□□□ -1.45
USP8-216ENST00000561206 BCL2L13Q9BXK5 485 aa5.99□□□□□ -1.45
USP8-216ENST00000561206 FTSJ1Q9UET6 329 aa5.99□□□□□ -1.45
USP8-216ENST00000561206 BACE2Q9Y5Z0 518 aa5.99□□□□□ -1.45
USP8-216ENST00000561206 SLC4A7Q9Y6M7 1214 aa5.99□□□□□ -1.45
USP8-216ENST00000561206 NPHP3-ACAD11A0A0J9YXS1 232 aa5.98□□□□□ -1.45
USP8-216ENST00000561206 C2orf71A6NGG8 1288 aa5.98□□□□□ -1.45
USP8-216ENST00000561206 STXBP3O00186 592 aa5.98□□□□□ -1.45
USP8-216ENST00000561206 CBFA2T2O43439 604 aa5.98□□□□□ -1.45
USP8-216ENST00000561206 CSRP2Q16527 193 aa5.98□□□□□ -1.45
USP8-216ENST00000561206 AGBL4Q5VU57 503 aa5.98□□□□□ -1.45
USP8-216ENST00000561206 GIPC2Q8TF65 315 aa5.98□□□□□ -1.45
USP8-216ENST00000561206 CACTINQ8WUQ7 758 aaKnown RBP5.98□□□□□ -1.45
USP8-216ENST00000561206 NEU4Q8WWR8 484 aaPredicted RBP5.98□□□□□ -1.45
USP8-216ENST00000561206 DPF3Q92784 378 aa5.98□□□□□ -1.45
USP8-216ENST00000561206 NKD1Q969G9 470 aa5.98□□□□□ -1.45
USP8-216ENST00000561206 GNRHR2Q96P88 292 aa5.98□□□□□ -1.45
USP8-216ENST00000561206 ZNRF3Q9ULT6 936 aa5.98□□□□□ -1.45
USP8-216ENST00000561206 COL6A1P12109 1028 aa5.97□□□□□ -1.45
USP8-216ENST00000561206 COMTP21964 271 aa5.97□□□□□ -1.45
USP8-216ENST00000561206 DGCR2P98153 550 aa5.97□□□□□ -1.45
USP8-216ENST00000561206 RIOX2Q8IUF8 465 aa5.97□□□□□ -1.45
USP8-216ENST00000561206 KIAA0825Q8IV33 1275 aa5.97□□□□□ -1.45
USP8-216ENST00000561206 WHRNQ9P202 907 aa5.97□□□□□ -1.45
USP8-216ENST00000561206 KRTAP29-1A8MX34 341 aaPredicted RBP5.96□□□□□ -1.46
USP8-216ENST00000561206 IL12RB1P42701 662 aa5.96□□□□□ -1.46
USP8-216ENST00000561206 KRTAP10-11P60412 298 aa5.96□□□□□ -1.46
USP8-216ENST00000561206 TCEAL1Q15170 157 aa5.96□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms