RNA–Protein interactions for RNA: ENST00000561010.5

GABPB1-211, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 3

Gene GABPB1, Length 867 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-211ENST00000561010 PRRC2BQ5JSZ5 2229 aaKnown RBP8.56□□□□□ -1.04
GABPB1-211ENST00000561010 BRWD1Q9NSI6 2320 aa8.55□□□□□ -1.04
GABPB1-211ENST00000561010 GRXCR1A8MXD5 290 aa8.55□□□□□ -1.04
GABPB1-211ENST00000561010 KIAA0355O15063 1070 aa8.55□□□□□ -1.04
GABPB1-211ENST00000561010 DUSP11O75319 330 aaKnown RBP8.55□□□□□ -1.04
GABPB1-211ENST00000561010 DXOO77932 396 aaKnown RBP8.55□□□□□ -1.04
GABPB1-211ENST00000561010 S1PR4O95977 384 aa8.55□□□□□ -1.04
GABPB1-211ENST00000561010 ASGR1P07306 291 aa8.55□□□□□ -1.04
GABPB1-211ENST00000561010 SLC3A2P08195 630 aaKnown RBP8.55□□□□□ -1.04
GABPB1-211ENST00000561010 ACRP10323 421 aa8.55□□□□□ -1.04
GABPB1-211ENST00000561010 MMP16P51512 607 aa8.55□□□□□ -1.04
GABPB1-211ENST00000561010 GNASQ5JWF2 1037 aa8.55□□□□□ -1.04
GABPB1-211ENST00000561010 C1orf53Q5VUE5 145 aa8.55□□□□□ -1.04
GABPB1-211ENST00000561010 RCSD1Q6JBY9 416 aa8.55□□□□□ -1.04
GABPB1-211ENST00000561010 NSMFQ6X4W1 530 aa8.55□□□□□ -1.04
GABPB1-211ENST00000561010 NOL8Q76FK4 1167 aaKnown RBP8.55□□□□□ -1.04
GABPB1-211ENST00000561010 FBXO16Q8IX29 292 aaPredicted RBP8.55□□□□□ -1.04
GABPB1-211ENST00000561010 CHST13Q8NET6 341 aa8.55□□□□□ -1.04
GABPB1-211ENST00000561010 STAG1Q8WVM7 1258 aa8.55□□□□□ -1.04
GABPB1-211ENST00000561010 GMCL1Q96IK5 515 aa8.55□□□□□ -1.04
GABPB1-211ENST00000561010 CDX2Q99626 313 aaPredicted RBP8.55□□□□□ -1.04
GABPB1-211ENST00000561010 PPP1R12CQ9BZL4 782 aa8.55□□□□□ -1.04
GABPB1-211ENST00000561010 CPVLQ9H3G5 476 aa8.55□□□□□ -1.04
GABPB1-211ENST00000561010 ACAD9Q9H845 621 aa8.55□□□□□ -1.04
GABPB1-211ENST00000561010 ZNF287Q9HBT7 754 aa8.55□□□□□ -1.04
GABPB1-211ENST00000561010 CHD7Q9P2D1 2997 aa8.55□□□□□ -1.04
GABPB1-211ENST00000561010 TTC28Q96AY4 2481 aa8.55□□□□□ -1.04
GABPB1-211ENST00000561010 UMODL1Q5DID0 1318 aa8.54□□□□□ -1.04
GABPB1-211ENST00000561010 DCDC2CA8MYV0 355 aa8.54□□□□□ -1.04
GABPB1-211ENST00000561010 NFIBO00712 420 aa8.54□□□□□ -1.04
GABPB1-211ENST00000561010 FGAP02671 866 aa8.54□□□□□ -1.04
GABPB1-211ENST00000561010 GGCXP38435 758 aa8.54□□□□□ -1.04
GABPB1-211ENST00000561010 OAZ1P54368 228 aa8.54□□□□□ -1.04
GABPB1-211ENST00000561010 GJA9P57773 515 aa8.54□□□□□ -1.04
GABPB1-211ENST00000561010 PSMC6P62333 389 aa8.54□□□□□ -1.04
GABPB1-211ENST00000561010 TNFAIP2Q03169 654 aa8.54□□□□□ -1.04
GABPB1-211ENST00000561010 FPGSQ05932 587 aa8.54□□□□□ -1.04
GABPB1-211ENST00000561010 MCM6Q14566 821 aa8.54□□□□□ -1.04
GABPB1-211ENST00000561010 PTPRNQ16849 979 aa8.54□□□□□ -1.04
GABPB1-211ENST00000561010 LRRFIP1Q32MZ4 808 aaKnown RBP8.54□□□□□ -1.04
GABPB1-211ENST00000561010 ZNF787Q6DD87 383 aa8.54□□□□□ -1.04
GABPB1-211ENST00000561010 CXCL17Q6UXB2 119 aa8.54□□□□□ -1.04
GABPB1-211ENST00000561010 FAM160B2Q86V87 743 aa8.54□□□□□ -1.04
GABPB1-211ENST00000561010 TBC1D10CQ8IV04 446 aa8.54□□□□□ -1.04
GABPB1-211ENST00000561010 MSL3Q8N5Y2 521 aaKnown RBP8.54□□□□□ -1.04
GABPB1-211ENST00000561010 CHURC1Q8WUH1 139 aa8.54□□□□□ -1.04
GABPB1-211ENST00000561010 RILPL2Q969X0 211 aa8.54□□□□□ -1.04
GABPB1-211ENST00000561010 EVI5LQ96CN4 794 aa8.54□□□□□ -1.04
GABPB1-211ENST00000561010 BUD13Q9BRD0 619 aaKnown RBP eCLIP8.54□□□□□ -1.04
GABPB1-211ENST00000561010 ZKSCAN3Q9BRR0 538 aa8.54□□□□□ -1.04
GABPB1-211ENST00000561010 TSEN34Q9BSV6 310 aaKnown RBP8.54□□□□□ -1.04
GABPB1-211ENST00000561010 UPF3AQ9H1J1 476 aaKnown RBP8.54□□□□□ -1.04
GABPB1-211ENST00000561010 SEMA6BQ9H3T3 888 aa8.54□□□□□ -1.04
GABPB1-211ENST00000561010 ABHD16BQ9H3Z7 469 aa8.54□□□□□ -1.04
GABPB1-211ENST00000561010 FBXO40Q9UH90 709 aa8.54□□□□□ -1.04
GABPB1-211ENST00000561010 TBX21Q9UL17 535 aa8.54□□□□□ -1.04
GABPB1-211ENST00000561010 CCPG1Q9ULG6 757 aa8.54□□□□□ -1.04
GABPB1-211ENST00000561010 COL4A4P53420 1690 aaPredicted RBP8.53□□□□□ -1.04
GABPB1-211ENST00000561010 MICAL3Q7RTP6 2002 aa8.53□□□□□ -1.04
GABPB1-211ENST00000561010 DYNC1LI2O43237 492 aaPredicted RBP8.53□□□□□ -1.04
GABPB1-211ENST00000561010 ORC4O43929 436 aa8.53□□□□□ -1.04
GABPB1-211ENST00000561010 IGHDP01880 384 aa8.53□□□□□ -1.04
GABPB1-211ENST00000561010 HSPD1P10809 573 aaKnown RBP8.53□□□□□ -1.04
GABPB1-211ENST00000561010 CSF2RAP15509 400 aa8.53□□□□□ -1.04
GABPB1-211ENST00000561010 SMPD1P17405 629 aa8.53□□□□□ -1.04
GABPB1-211ENST00000561010 CST5P28325 142 aaPredicted RBP8.53□□□□□ -1.04
GABPB1-211ENST00000561010 CYP2C18P33260 490 aa8.53□□□□□ -1.04
GABPB1-211ENST00000561010 CDK7P50613 346 aa8.53□□□□□ -1.04
GABPB1-211ENST00000561010 BAATQ14032 418 aaPredicted RBP8.53□□□□□ -1.04
GABPB1-211ENST00000561010 SYDE2Q5VT97 1194 aa8.53□□□□□ -1.04
GABPB1-211ENST00000561010 LYPD8Q6UX82 237 aa8.53□□□□□ -1.04
GABPB1-211ENST00000561010 SLC30A10Q6XR72 485 aa8.53□□□□□ -1.04
GABPB1-211ENST00000561010 C16orf59Q7L2K0 433 aa8.53□□□□□ -1.04
GABPB1-211ENST00000561010 ANKRD33Q7Z3H0 272 aa8.53□□□□□ -1.04
GABPB1-211ENST00000561010 TLK2Q86UE8 772 aa8.53□□□□□ -1.04
GABPB1-211ENST00000561010 MAFAQ8NHW3 353 aaPredicted RBP8.53□□□□□ -1.04
GABPB1-211ENST00000561010 NUP133Q8WUM0 1156 aa8.53□□□□□ -1.04
GABPB1-211ENST00000561010 GLT1D1Q96MS3 346 aa8.53□□□□□ -1.04
GABPB1-211ENST00000561010 TMEM47Q9BQJ4 181 aa8.53□□□□□ -1.04
GABPB1-211ENST00000561010 HELLSQ9NRZ9 838 aa8.53□□□□□ -1.04
GABPB1-211ENST00000561010 CYP39A1Q9NYL5 469 aa8.53□□□□□ -1.04
GABPB1-211ENST00000561010 ANAPC4Q9UJX5 808 aa8.53□□□□□ -1.04
GABPB1-211ENST00000561010 NLRC5Q86WI3 1866 aa8.53□□□□□ -1.04
GABPB1-211ENST00000561010 GRIN2DO15399 1336 aa8.53□□□□□ -1.04
GABPB1-211ENST00000561010 NEDD4P46934 1319 aa8.53□□□□□ -1.04
GABPB1-211ENST00000561010 ATG2AQ2TAZ0 1938 aa8.52□□□□□ -1.04
GABPB1-211ENST00000561010 A0A0U1RQG5 324 aaPredicted RBP8.52□□□□□ -1.05
GABPB1-211ENST00000561010 ARVCFO00192 962 aa8.52□□□□□ -1.05
GABPB1-211ENST00000561010 TIMP1P01033 207 aa8.52□□□□□ -1.05
GABPB1-211ENST00000561010 CCNYL3P0C7X3 344 aa8.52□□□□□ -1.05
GABPB1-211ENST00000561010 GOLGA8HP0CJ92 632 aa8.52□□□□□ -1.05
GABPB1-211ENST00000561010 SMAD3P84022 425 aaKnown RBP8.52□□□□□ -1.05
GABPB1-211ENST00000561010 HDAC1Q13547 482 aaPredicted RBP8.52□□□□□ -1.05
GABPB1-211ENST00000561010 ALX1Q15699 326 aa8.52□□□□□ -1.05
GABPB1-211ENST00000561010 MCMDC2Q4G0Z9 681 aa8.52□□□□□ -1.05
GABPB1-211ENST00000561010 TAPT1Q6NXT6 567 aa8.52□□□□□ -1.05
GABPB1-211ENST00000561010 PHF6Q8IWS0 365 aaKnown RBP eCLIP8.52□□□□□ -1.05
GABPB1-211ENST00000561010 FAM126BQ8IXS8 530 aa8.52□□□□□ -1.05
GABPB1-211ENST00000561010 USP38Q8NB14 1042 aa8.52□□□□□ -1.05
GABPB1-211ENST00000561010 EXOC6Q8TAG9 804 aa8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms