RNA–Protein interactions for RNA: ENST00000560964.1

WHAMM-202, Transcript of WAS protein homolog associated with actin, golgi membranes and microtubules, humanhuman

TSL 2

Gene WHAMM, Length 677 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
WHAMM-202ENST00000560964 MATN3O15232 486 aa6.89□□□□□ -1.31
WHAMM-202ENST00000560964 THBDP07204 575 aa6.89□□□□□ -1.31
WHAMM-202ENST00000560964 ZNF20P17024 532 aa6.89□□□□□ -1.31
WHAMM-202ENST00000560964 MROH9Q5TGP6 573 aa6.89□□□□□ -1.31
WHAMM-202ENST00000560964 GLB1LQ6UWU2 654 aa6.89□□□□□ -1.31
WHAMM-202ENST00000560964 RIOX2Q8IUF8 465 aa6.89□□□□□ -1.31
WHAMM-202ENST00000560964 DPF3Q92784 378 aa6.89□□□□□ -1.31
WHAMM-202ENST00000560964 KRTAP3-1Q9BYR8 98 aa6.89□□□□□ -1.31
WHAMM-202ENST00000560964 CYP26B1Q9NR63 512 aa6.89□□□□□ -1.31
WHAMM-202ENST00000560964 APEX2Q9UBZ4 518 aa6.89□□□□□ -1.31
WHAMM-202ENST00000560964 ZNF536O15090 1300 aa6.89□□□□□ -1.31
WHAMM-202ENST00000560964 C9orf118A6NHY6 69 aa6.88□□□□□ -1.31
WHAMM-202ENST00000560964 VAMP1P23763 118 aa6.88□□□□□ -1.31
WHAMM-202ENST00000560964 ITGA1P56199 1179 aa6.88□□□□□ -1.31
WHAMM-202ENST00000560964 MBLAC2Q68D91 279 aa6.88□□□□□ -1.31
WHAMM-202ENST00000560964 MCTP2Q6DN12 878 aa6.88□□□□□ -1.31
WHAMM-202ENST00000560964 MILR1Q7Z6M3 343 aa6.88□□□□□ -1.31
WHAMM-202ENST00000560964 TEX2Q8IWB9 1127 aa6.88□□□□□ -1.31
WHAMM-202ENST00000560964 FAM126BQ8IXS8 530 aa6.88□□□□□ -1.31
WHAMM-202ENST00000560964 FAM26EQ8N5C1 309 aa6.88□□□□□ -1.31
WHAMM-202ENST00000560964 TXNDC5Q8NBS9 432 aaKnown RBP6.88□□□□□ -1.31
WHAMM-202ENST00000560964 DVL3Q92997 716 aaPredicted RBP6.88□□□□□ -1.31
WHAMM-202ENST00000560964 SHDQ96IW2 340 aa6.88□□□□□ -1.31
WHAMM-202ENST00000560964 LCORQ96JN0 433 aaPredicted RBP6.88□□□□□ -1.31
WHAMM-202ENST00000560964 BTG4Q9NY30 223 aa6.88□□□□□ -1.31
WHAMM-202ENST00000560964 SRRDQ9UH36 339 aa6.88□□□□□ -1.31
WHAMM-202ENST00000560964 LOC105371045A0A1W2PR82 267 aa6.87□□□□□ -1.31
WHAMM-202ENST00000560964 AKAP8O43823 692 aaKnown RBP6.87□□□□□ -1.31
WHAMM-202ENST00000560964 GTF2A2P52657 109 aa6.87□□□□□ -1.31
WHAMM-202ENST00000560964 RPL11P62913 178 aaKnown RBP6.87□□□□□ -1.31
WHAMM-202ENST00000560964 NCAPHQ15003 741 aa6.87□□□□□ -1.31
WHAMM-202ENST00000560964 PRR31Q5SQ13 230 aa6.87□□□□□ -1.31
WHAMM-202ENST00000560964 TMCO4Q5TGY1 634 aa6.87□□□□□ -1.31
WHAMM-202ENST00000560964 PLEKHH3Q7Z736 793 aa6.87□□□□□ -1.31
WHAMM-202ENST00000560964 TRIM59Q8IWR1 403 aa6.87□□□□□ -1.31
WHAMM-202ENST00000560964 YIPF4Q9BSR8 244 aa6.87□□□□□ -1.31
WHAMM-202ENST00000560964 TIMM13Q9Y5L4 95 aaPredicted RBP6.87□□□□□ -1.31
WHAMM-202ENST00000560964 DDX3XO00571 662 aaKnown RBP eCLIP6.86□□□□□ -1.31
WHAMM-202ENST00000560964 GJA8P48165 433 aa6.86□□□□□ -1.31
WHAMM-202ENST00000560964 NASPP49321 788 aaPredicted RBP6.86□□□□□ -1.31
WHAMM-202ENST00000560964 NKX3-2P78367 333 aa6.86□□□□□ -1.31
WHAMM-202ENST00000560964 C9orf131Q5VYM1 1079 aa6.86□□□□□ -1.31
WHAMM-202ENST00000560964 E4F1Q66K89 784 aaPredicted RBP6.86□□□□□ -1.31
WHAMM-202ENST00000560964 GTF2IRD2BQ6EKJ0 949 aa6.86□□□□□ -1.31
WHAMM-202ENST00000560964 GTF2IRD2Q86UP8 949 aa6.86□□□□□ -1.31
WHAMM-202ENST00000560964 METTL16Q86W50 562 aaKnown RBP6.86□□□□□ -1.31
WHAMM-202ENST00000560964 SEC16BQ96JE7 1060 aa6.86□□□□□ -1.31
WHAMM-202ENST00000560964 NKX2-4Q9H2Z4 354 aa6.86□□□□□ -1.31
WHAMM-202ENST00000560964 STRIP2Q9ULQ0 834 aa6.86□□□□□ -1.31
WHAMM-202ENST00000560964 EPB41L3Q9Y2J2 1087 aaPredicted RBP6.86□□□□□ -1.31
WHAMM-202ENST00000560964 MYO1BO43795 1136 aa6.85□□□□□ -1.31
WHAMM-202ENST00000560964 CYP7B1O75881 506 aa6.85□□□□□ -1.31
WHAMM-202ENST00000560964 RECKO95980 971 aa6.85□□□□□ -1.31
WHAMM-202ENST00000560964 CHRNA2Q15822 529 aa6.85□□□□□ -1.31
WHAMM-202ENST00000560964 INF2Q27J81 1249 aa6.85□□□□□ -1.31
WHAMM-202ENST00000560964 PRAMEF18Q5VWM3 479 aa6.85□□□□□ -1.31
WHAMM-202ENST00000560964 TRMT2BQ96GJ1 504 aaKnown RBP6.85□□□□□ -1.31
WHAMM-202ENST00000560964 SYT3Q9BQG1 590 aa6.85□□□□□ -1.31
WHAMM-202ENST00000560964 SSBP3Q9BWW4 388 aaPredicted RBP6.85□□□□□ -1.31
WHAMM-202ENST00000560964 X6R8D5 127 aa6.85□□□□□ -1.31
WHAMM-202ENST00000560964 LAMTOR5O43504 91 aa6.84□□□□□ -1.31
WHAMM-202ENST00000560964 CEP68Q76N32 757 aa6.84□□□□□ -1.31
WHAMM-202ENST00000560964 STK32CQ86UX6 486 aa6.84□□□□□ -1.31
WHAMM-202ENST00000560964 Q8N1Y9 231 aa6.84□□□□□ -1.31
WHAMM-202ENST00000560964 NPLOC4Q8TAT6 608 aa6.84□□□□□ -1.31
WHAMM-202ENST00000560964 FRS2Q8WU20 508 aa6.84□□□□□ -1.31
WHAMM-202ENST00000560964 KISS1RQ969F8 398 aaPredicted RBP6.84□□□□□ -1.31
WHAMM-202ENST00000560964 PPP1R14AQ96A00 147 aa6.84□□□□□ -1.31
WHAMM-202ENST00000560964 MRGPRX3Q96LB0 322 aa6.84□□□□□ -1.31
WHAMM-202ENST00000560964 COA3Q9Y2R0 106 aaPredicted RBP6.84□□□□□ -1.31
WHAMM-202ENST00000560964 CYP1A1P04798 512 aaPredicted RBP6.83□□□□□ -1.32
WHAMM-202ENST00000560964 STAT5AP42229 794 aa6.83□□□□□ -1.32
WHAMM-202ENST00000560964 KCNAB2Q13303 367 aa6.83□□□□□ -1.32
WHAMM-202ENST00000560964 CR1LQ2VPA4 569 aa6.83□□□□□ -1.32
WHAMM-202ENST00000560964 SLC16A11Q8NCK7 471 aa6.83□□□□□ -1.32
WHAMM-202ENST00000560964 DIO2Q92813 273 aa6.83□□□□□ -1.32
WHAMM-202ENST00000560964 TMEM169Q96HH4 297 aa6.83□□□□□ -1.32
WHAMM-202ENST00000560964 ZNF652Q9Y2D9 606 aa6.83□□□□□ -1.32
WHAMM-202ENST00000560964 FSHBP01225 129 aa6.82□□□□□ -1.32
WHAMM-202ENST00000560964 ZNF28P17035 718 aa6.82□□□□□ -1.32
WHAMM-202ENST00000560964 FPR2P25090 351 aa6.82□□□□□ -1.32
WHAMM-202ENST00000560964 HOXC12P31275 282 aa6.82□□□□□ -1.32
WHAMM-202ENST00000560964 MFAP1P55081 439 aaKnown RBP6.82□□□□□ -1.32
WHAMM-202ENST00000560964 LIMS2Q7Z4I7 341 aa6.82□□□□□ -1.32
WHAMM-202ENST00000560964 NT5DC4Q86YG4 428 aa6.82□□□□□ -1.32
WHAMM-202ENST00000560964 CLIC6Q96NY7 704 aa6.82□□□□□ -1.32
WHAMM-202ENST00000560964 WRNIP1Q96S55 665 aa6.82□□□□□ -1.32
WHAMM-202ENST00000560964 CDK5RAP1Q96SZ6 601 aaKnown RBP6.82□□□□□ -1.32
WHAMM-202ENST00000560964 L2HGDHQ9H9P8 463 aa6.82□□□□□ -1.32
WHAMM-202ENST00000560964 ST6GALNAC2Q9UJ37 374 aa6.82□□□□□ -1.32
WHAMM-202ENST00000560964 TSC22D4Q9Y3Q8 395 aa6.82□□□□□ -1.32
WHAMM-202ENST00000560964 HGSO14964 777 aaPredicted RBP6.81□□□□□ -1.32
WHAMM-202ENST00000560964 MEFVO15553 781 aaPredicted RBP6.81□□□□□ -1.32
WHAMM-202ENST00000560964 IGSF3O75054 1194 aa6.81□□□□□ -1.32
WHAMM-202ENST00000560964 BCL6P41182 706 aa6.81□□□□□ -1.32
WHAMM-202ENST00000560964 ADAM9Q13443 819 aa6.81□□□□□ -1.32
WHAMM-202ENST00000560964 FAM169BQ8N8A8 192 aa6.81□□□□□ -1.32
WHAMM-202ENST00000560964 TOE1Q96GM8 510 aaKnown RBP6.81□□□□□ -1.32
WHAMM-202ENST00000560964 CCDC140Q96MF4 163 aa6.81□□□□□ -1.32
WHAMM-202ENST00000560964 TMEM168Q9H0V1 697 aa6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms