RNA–Protein interactions for RNA: ENST00000560959.5

TPM1-226, Transcript of tropomyosin 1, humanhuman

TSL 2 BASIC

Gene TPM1, Length 925 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-226ENST00000560959 PTK7Q13308 1070 aa21.76■■□□□ 1.07
TPM1-226ENST00000560959 VPS53Q5VIR6 699 aa21.76■■□□□ 1.07
TPM1-226ENST00000560959 TMCO2Q7Z6W1 182 aaPredicted RBP21.76■■□□□ 1.07
TPM1-226ENST00000560959 GADD45GIP1Q8TAE8 222 aaPredicted RBP21.76■■□□□ 1.07
TPM1-226ENST00000560959 NSUN6Q8TEA1 469 aaKnown RBP21.76■■□□□ 1.07
TPM1-226ENST00000560959 TOMM22Q9NS69 142 aa21.76■■□□□ 1.07
TPM1-226ENST00000560959 CTNNA3Q9UI47 895 aa21.76■■□□□ 1.07
TPM1-226ENST00000560959 INSL6Q9Y581 213 aa21.76■■□□□ 1.07
TPM1-226ENST00000560959 PIEZO1Q92508 2521 aa21.76■■□□□ 1.07
TPM1-226ENST00000560959 FAM86C2PA6NEL3 165 aa21.75■■□□□ 1.07
TPM1-226ENST00000560959 ALADP13716 330 aa21.75■■□□□ 1.07
TPM1-226ENST00000560959 CHMP4BP1P59074 171 aa21.75■■□□□ 1.07
TPM1-226ENST00000560959 STXBP2Q15833 593 aa21.75■■□□□ 1.07
TPM1-226ENST00000560959 LY6KQ17RY6 165 aa21.75■■□□□ 1.07
TPM1-226ENST00000560959 MIER1Q8N108 512 aa21.75■■□□□ 1.07
TPM1-226ENST00000560959 C7orf31Q8N865 590 aa21.75■■□□□ 1.07
TPM1-226ENST00000560959 MX1P20591 662 aa21.74■■□□□ 1.07
TPM1-226ENST00000560959 SEPT14Q6ZU15 432 aa21.74■■□□□ 1.07
TPM1-226ENST00000560959 EVI5LQ96CN4 794 aa21.74■■□□□ 1.07
TPM1-226ENST00000560959 HDAC6Q9UBN7 1215 aa21.74■■□□□ 1.07
TPM1-226ENST00000560959 ZMYM6O95789 1325 aa21.74■■□□□ 1.07
TPM1-226ENST00000560959 TRIP12Q14669 1992 aaPredicted RBP21.74■■□□□ 1.07
TPM1-226ENST00000560959 HAS3O00219 553 aa21.73■■□□□ 1.07
TPM1-226ENST00000560959 NT5C2P49902 561 aa21.73■■□□□ 1.07
TPM1-226ENST00000560959 LAMC2Q13753 1193 aa21.73■■□□□ 1.07
TPM1-226ENST00000560959 TCTN1Q2MV58 587 aa21.73■■□□□ 1.07
TPM1-226ENST00000560959 TRIM71Q2Q1W2 868 aaKnown RBP21.73■■□□□ 1.07
TPM1-226ENST00000560959 RRP12Q5JTH9 1297 aaKnown RBP21.73■■□□□ 1.07
TPM1-226ENST00000560959 TRAF7Q6Q0C0 670 aa21.73■■□□□ 1.07
TPM1-226ENST00000560959 MCF2L2Q86YR7 1114 aa21.73■■□□□ 1.07
TPM1-226ENST00000560959 SYTL5Q8TDW5 730 aaPredicted RBP21.73■■□□□ 1.07
TPM1-226ENST00000560959 OTUD7AQ8TE49 926 aaPredicted RBP21.73■■□□□ 1.07
TPM1-226ENST00000560959 CRBNQ96SW2 442 aa21.73■■□□□ 1.07
TPM1-226ENST00000560959 DDX41Q9UJV9 622 aaKnown RBP21.73■■□□□ 1.07
TPM1-226ENST00000560959 MTUS1Q9ULD2 1270 aa21.73■■□□□ 1.07
TPM1-226ENST00000560959 EMSYQ7Z589 1322 aa21.73■■□□□ 1.07
TPM1-226ENST00000560959 BRWD1Q9NSI6 2320 aa21.73■■□□□ 1.07
TPM1-226ENST00000560959 GRXCR2A6NFK2 248 aa21.72■■□□□ 1.07
TPM1-226ENST00000560959 F2P00734 622 aa21.72■■□□□ 1.07
TPM1-226ENST00000560959 KCNA5P22460 613 aa21.72■■□□□ 1.07
TPM1-226ENST00000560959 PSEN2P49810 448 aa21.72■■□□□ 1.07
TPM1-226ENST00000560959 HTRA4P83105 476 aaPredicted RBP21.72■■□□□ 1.07
TPM1-226ENST00000560959 DGKHQ86XP1 1220 aa21.72■■□□□ 1.07
TPM1-226ENST00000560959 PPTC7Q8NI37 304 aa21.72■■□□□ 1.07
TPM1-226ENST00000560959 NEK9Q8TD19 979 aa21.72■■□□□ 1.07
TPM1-226ENST00000560959 SAMD11Q96NU1 681 aa21.72■■□□□ 1.07
TPM1-226ENST00000560959 TAAR1Q96RJ0 339 aa21.72■■□□□ 1.07
TPM1-226ENST00000560959 KCNH6Q9H252 994 aa21.72■■□□□ 1.07
TPM1-226ENST00000560959 ABCB11O95342 1321 aa21.72■■□□□ 1.07
TPM1-226ENST00000560959 PTPRSQ13332 1948 aa21.71■■□□□ 1.07
TPM1-226ENST00000560959 LGR5O75473 907 aa21.71■■□□□ 1.07
TPM1-226ENST00000560959 EIF3JO75822 258 aaKnown RBP21.71■■□□□ 1.07
TPM1-226ENST00000560959 MKRN4PQ13434 485 aaPredicted RBP21.71■■□□□ 1.07
TPM1-226ENST00000560959 PTPROQ16827 1216 aa21.71■■□□□ 1.07
TPM1-226ENST00000560959 USH1GQ495M9 461 aa21.71■■□□□ 1.07
TPM1-226ENST00000560959 MCMDC2Q4G0Z9 681 aa21.71■■□□□ 1.07
TPM1-226ENST00000560959 ZNF618Q5T7W0 954 aa21.71■■□□□ 1.07
TPM1-226ENST00000560959 PTCRAQ6ISU1 281 aaPredicted RBP21.71■■□□□ 1.07
TPM1-226ENST00000560959 FBXO22Q8NEZ5 403 aa21.71■■□□□ 1.07
TPM1-226ENST00000560959 SP7Q8TDD2 431 aaPredicted RBP21.71■■□□□ 1.07
TPM1-226ENST00000560959 MRPL38Q96DV4 380 aaKnown RBP21.71■■□□□ 1.07
TPM1-226ENST00000560959 RMDN3Q96TC7 470 aa21.71■■□□□ 1.07
TPM1-226ENST00000560959 COL4A4P53420 1690 aaPredicted RBP21.71■■□□□ 1.07
TPM1-226ENST00000560959 MUC6Q6W4X9 2439 aa21.71■■□□□ 1.07
TPM1-226ENST00000560959 SALL3Q9BXA9 1300 aa21.71■■□□□ 1.07
TPM1-226ENST00000560959 PPFIA4O75335 1185 aa21.7■■□□□ 1.06
TPM1-226ENST00000560959 HOXD8P13378 290 aaPredicted RBP21.7■■□□□ 1.06
TPM1-226ENST00000560959 MFSD10Q14728 455 aa21.7■■□□□ 1.06
TPM1-226ENST00000560959 KIAA0753Q2KHM9 967 aa21.7■■□□□ 1.06
TPM1-226ENST00000560959 MFSD6Q6ZSS7 791 aa21.7■■□□□ 1.06
TPM1-226ENST00000560959 CHST3Q7LGC8 479 aa21.7■■□□□ 1.06
TPM1-226ENST00000560959 TBC1D5Q92609 795 aa21.7■■□□□ 1.06
TPM1-226ENST00000560959 AMHP03971 560 aa21.69■■□□□ 1.06
TPM1-226ENST00000560959 HSPD1P10809 573 aaKnown RBP21.69■■□□□ 1.06
TPM1-226ENST00000560959 SSTR3P32745 418 aaPredicted RBP21.69■■□□□ 1.06
TPM1-226ENST00000560959 MBTPS1Q14703 1052 aa21.69■■□□□ 1.06
TPM1-226ENST00000560959 ALYREFQ86V81 257 aaKnown RBP21.69■■□□□ 1.06
TPM1-226ENST00000560959 ALG1Q9BT22 464 aa21.69■■□□□ 1.06
TPM1-226ENST00000560959 RNF41Q9H4P4 317 aaPredicted RBP21.69■■□□□ 1.06
TPM1-226ENST00000560959 COL20A1Q9P218 1284 aa21.69■■□□□ 1.06
TPM1-226ENST00000560959 MRPL11Q9Y3B7 192 aaKnown RBP21.69■■□□□ 1.06
TPM1-226ENST00000560959 POTEB3A0JP26 581 aa21.68■■□□□ 1.06
TPM1-226ENST00000560959 IL9P15248 144 aa21.68■■□□□ 1.06
TPM1-226ENST00000560959 CDC37Q16543 378 aaPredicted RBP21.68■■□□□ 1.06
TPM1-226ENST00000560959 CCDC178Q5BJE1 867 aa21.68■■□□□ 1.06
TPM1-226ENST00000560959 ARHGEF16Q5VV41 709 aa21.68■■□□□ 1.06
TPM1-226ENST00000560959 KCNV1Q6PIU1 500 aa21.68■■□□□ 1.06
TPM1-226ENST00000560959 POTEBQ6S5H4 581 aa21.68■■□□□ 1.06
TPM1-226ENST00000560959 LIN28BQ6ZN17 250 aaKnown RBP eCLIP21.68■■□□□ 1.06
TPM1-226ENST00000560959 DHX37Q8IY37 1157 aaKnown RBP21.68■■□□□ 1.06
TPM1-226ENST00000560959 C17orf80Q9BSJ5 609 aa21.68■■□□□ 1.06
TPM1-226ENST00000560959 UBA5Q9GZZ9 404 aa21.68■■□□□ 1.06
TPM1-226ENST00000560959 FAM50BQ9Y247 325 aa21.68■■□□□ 1.06
TPM1-226ENST00000560959 NR3C2P08235 984 aa21.67■■□□□ 1.06
TPM1-226ENST00000560959 GOLGA8HP0CJ92 632 aa21.67■■□□□ 1.06
TPM1-226ENST00000560959 COL19A1Q14993 1142 aa21.67■■□□□ 1.06
TPM1-226ENST00000560959 TIGD5Q53EQ6 642 aa21.67■■□□□ 1.06
TPM1-226ENST00000560959 FAM117BQ6P1L5 589 aa21.67■■□□□ 1.06
TPM1-226ENST00000560959 DBF4BQ8NFT6 615 aa21.67■■□□□ 1.06
TPM1-226ENST00000560959 ANKS1AQ92625 1134 aa21.67■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms