RNA–Protein interactions for RNA: ENST00000560853.5

LINC00593-202, long intergenic non-protein coding RNA 593, humanhuman

TSL 1 (best) BASIC

Gene LINC00593, Length 1,483 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00593-202ENST00000560853 MAP3K20Q9NYL2 800 aaKnown RBP17.38■□□□□ 0.37
LINC00593-202ENST00000560853 MRVI1Q9Y6F6 885 aa17.38■□□□□ 0.37
LINC00593-202ENST00000560853 HSFX4A0A1B0GTS1 333 aaPredicted RBP17.37■□□□□ 0.37
LINC00593-202ENST00000560853 HSFX3A0A1B0GWH4 333 aaPredicted RBP17.37■□□□□ 0.37
LINC00593-202ENST00000560853 GCOM1H8Y6P7 765 aaPredicted RBP17.37■□□□□ 0.37
LINC00593-202ENST00000560853 DDAH1O94760 285 aa17.37■□□□□ 0.37
LINC00593-202ENST00000560853 SUPT20HL2P0C7V6 817 aa17.37■□□□□ 0.37
LINC00593-202ENST00000560853 POLR2MP0CAP2 368 aa17.37■□□□□ 0.37
LINC00593-202ENST00000560853 CYP2C9P11712 490 aa17.37■□□□□ 0.37
LINC00593-202ENST00000560853 COL9A3Q14050 684 aaPredicted RBP17.37■□□□□ 0.37
LINC00593-202ENST00000560853 NECTIN1Q15223 517 aa17.37■□□□□ 0.37
LINC00593-202ENST00000560853 FCHSD1Q86WN1 690 aa17.37■□□□□ 0.37
LINC00593-202ENST00000560853 PDCD2LQ9BRP1 358 aa17.37■□□□□ 0.37
LINC00593-202ENST00000560853 WNT8AQ9H1J5 351 aa17.37■□□□□ 0.37
LINC00593-202ENST00000560853 TTYH1Q9H313 450 aaPredicted RBP17.37■□□□□ 0.37
LINC00593-202ENST00000560853 DDX41Q9UJV9 622 aaKnown RBP17.37■□□□□ 0.37
LINC00593-202ENST00000560853 CCDC69A6NI79 296 aa17.37■□□□□ 0.37
LINC00593-202ENST00000560853 SH2B2O14492 632 aaPredicted RBP17.37■□□□□ 0.37
LINC00593-202ENST00000560853 MMP3P08254 477 aa17.37■□□□□ 0.37
LINC00593-202ENST00000560853 KIF5BP33176 963 aa17.37■□□□□ 0.37
LINC00593-202ENST00000560853 NFRKBQ6P4R8 1299 aa17.37■□□□□ 0.37
LINC00593-202ENST00000560853 SAMD3Q8N6K7 520 aa17.37■□□□□ 0.37
LINC00593-202ENST00000560853 TMEM87BQ96K49 555 aa17.37■□□□□ 0.37
LINC00593-202ENST00000560853 MAP3K14Q99558 947 aa17.37■□□□□ 0.37
LINC00593-202ENST00000560853 MTA3Q9BTC8 594 aa17.37■□□□□ 0.37
LINC00593-202ENST00000560853 PGM5Q15124 567 aa17.36■□□□□ 0.37
LINC00593-202ENST00000560853 TMTC2Q8N394 836 aa17.36■□□□□ 0.37
LINC00593-202ENST00000560853 IL31RAQ8NI17 732 aa17.36■□□□□ 0.37
LINC00593-202ENST00000560853 SCLYQ96I15 445 aa17.36■□□□□ 0.37
LINC00593-202ENST00000560853 ZFP91Q96JP5 570 aaPredicted RBP17.36■□□□□ 0.37
LINC00593-202ENST00000560853 CDX2Q99626 313 aaPredicted RBP17.36■□□□□ 0.37
LINC00593-202ENST00000560853 LRRC2Q9BYS8 371 aa17.36■□□□□ 0.37
LINC00593-202ENST00000560853 GRXCR1A8MXD5 290 aa17.35■□□□□ 0.37
LINC00593-202ENST00000560853 FGBP02675 491 aa17.35■□□□□ 0.37
LINC00593-202ENST00000560853 RXRAP19793 462 aa17.35■□□□□ 0.37
LINC00593-202ENST00000560853 CASTP20810 708 aaKnown RBP17.35■□□□□ 0.37
LINC00593-202ENST00000560853 DNAJB2P25686 324 aa17.35■□□□□ 0.37
LINC00593-202ENST00000560853 RASIP1Q5U651 963 aa17.35■□□□□ 0.37
LINC00593-202ENST00000560853 OTOP2Q7RTS6 562 aa17.35■□□□□ 0.37
LINC00593-202ENST00000560853 VSIG10LQ86VR7 867 aa17.35■□□□□ 0.37
LINC00593-202ENST00000560853 RAB11FIP4Q86YS3 637 aa17.35■□□□□ 0.37
LINC00593-202ENST00000560853 RRP36Q96EU6 259 aaKnown RBP17.35■□□□□ 0.37
LINC00593-202ENST00000560853 SPZ1Q9BXG8 430 aa17.35■□□□□ 0.37
LINC00593-202ENST00000560853 MYH7BA7E2Y1 1941 aa17.35■□□□□ 0.37
LINC00593-202ENST00000560853 SORBS3O60504 671 aa17.34■□□□□ 0.37
LINC00593-202ENST00000560853 RGS20O76081 388 aa17.34■□□□□ 0.37
LINC00593-202ENST00000560853 PLEKHA8P1O95397 391 aa17.34■□□□□ 0.37
LINC00593-202ENST00000560853 CCND2P30279 289 aa17.34■□□□□ 0.37
LINC00593-202ENST00000560853 LAMC2Q13753 1193 aa17.34■□□□□ 0.37
LINC00593-202ENST00000560853 DGKDQ16760 1214 aa17.34■□□□□ 0.37
LINC00593-202ENST00000560853 DHX37Q8IY37 1157 aaKnown RBP17.34■□□□□ 0.37
LINC00593-202ENST00000560853 RPUSD2Q8IZ73 545 aaKnown RBP17.34■□□□□ 0.37
LINC00593-202ENST00000560853 CMTR1Q8N1G2 835 aaKnown RBP17.34■□□□□ 0.37
LINC00593-202ENST00000560853 PRUNE2Q8WUY3 3088 aa17.34■□□□□ 0.37
LINC00593-202ENST00000560853 HERVK_113Q902F9 699 aa17.34■□□□□ 0.37
LINC00593-202ENST00000560853 EMID1Q96A84 441 aaPredicted RBP17.34■□□□□ 0.37
LINC00593-202ENST00000560853 LZTS2Q9BRK4 669 aa17.34■□□□□ 0.37
LINC00593-202ENST00000560853 MTIF3Q9H2K0 278 aaKnown RBP17.34■□□□□ 0.37
LINC00593-202ENST00000560853 CXXC1Q9P0U4 656 aaPredicted RBP17.34■□□□□ 0.37
LINC00593-202ENST00000560853 SEC63Q9UGP8 760 aaKnown RBP17.34■□□□□ 0.37
LINC00593-202ENST00000560853 NOD1Q9Y239 953 aa17.34■□□□□ 0.37
LINC00593-202ENST00000560853 PBX2P40425 430 aa17.33■□□□□ 0.37
LINC00593-202ENST00000560853 LIFRP42702 1097 aa17.33■□□□□ 0.37
LINC00593-202ENST00000560853 GNAQP50148 359 aa17.33■□□□□ 0.37
LINC00593-202ENST00000560853 PTPN11Q06124 597 aaPredicted RBP17.33■□□□□ 0.37
LINC00593-202ENST00000560853 RNF20Q5VTR2 975 aa17.33■□□□□ 0.37
LINC00593-202ENST00000560853 SRBD1Q8N5C6 995 aaKnown RBP17.33■□□□□ 0.37
LINC00593-202ENST00000560853 MYLIPQ8WY64 445 aa17.33■□□□□ 0.37
LINC00593-202ENST00000560853 KAT2BQ92831 832 aa17.33■□□□□ 0.37
LINC00593-202ENST00000560853 TIFAQ96CG3 184 aa17.33■□□□□ 0.37
LINC00593-202ENST00000560853 SLC12A7Q9Y666 1083 aa17.33■□□□□ 0.37
LINC00593-202ENST00000560853 TMEM265A0A087WTH1 108 aa17.32■□□□□ 0.36
LINC00593-202ENST00000560853 SMARCA1P28370 1054 aa17.32■□□□□ 0.36
LINC00593-202ENST00000560853 PTGISQ16647 500 aa17.32■□□□□ 0.36
LINC00593-202ENST00000560853 KCNV1Q6PIU1 500 aa17.32■□□□□ 0.36
LINC00593-202ENST00000560853 PPTC7Q8NI37 304 aa17.32■□□□□ 0.36
LINC00593-202ENST00000560853 PBX4Q9BYU1 374 aa17.32■□□□□ 0.36
LINC00593-202ENST00000560853 CDC45O75419 566 aa17.31■□□□□ 0.36
LINC00593-202ENST00000560853 GGPS1O95749 300 aa17.31■□□□□ 0.36
LINC00593-202ENST00000560853 ZNF286BP0CG31 522 aa17.31■□□□□ 0.36
LINC00593-202ENST00000560853 CALM1P0DP23 149 aa17.31■□□□□ 0.36
LINC00593-202ENST00000560853 CALM2P0DP24 149 aa17.31■□□□□ 0.36
LINC00593-202ENST00000560853 CALM3P0DP25 149 aa17.31■□□□□ 0.36
LINC00593-202ENST00000560853 SP2Q02086 613 aa17.31■□□□□ 0.36
LINC00593-202ENST00000560853 MYSM1Q5VVJ2 828 aa17.31■□□□□ 0.36
LINC00593-202ENST00000560853 USP17L6PQ6QN14 398 aa17.31■□□□□ 0.36
LINC00593-202ENST00000560853 DEFB128Q7Z7B8 93 aa17.31■□□□□ 0.36
LINC00593-202ENST00000560853 MICU3Q86XE3 530 aa17.31■□□□□ 0.36
LINC00593-202ENST00000560853 RETREG2Q8NC44 543 aa17.31■□□□□ 0.36
LINC00593-202ENST00000560853 GPKOWQ92917 476 aaPredicted RBP eCLIP17.31■□□□□ 0.36
LINC00593-202ENST00000560853 SPATA33Q96N06 139 aa17.31■□□□□ 0.36
LINC00593-202ENST00000560853 ALG1Q9BT22 464 aa17.31■□□□□ 0.36
LINC00593-202ENST00000560853 SCN5AQ14524 2016 aa17.31■□□□□ 0.36
LINC00593-202ENST00000560853 UBA1P22314 1058 aaKnown RBP17.31■□□□□ 0.36
LINC00593-202ENST00000560853 PSEN2P49810 448 aa17.31■□□□□ 0.36
LINC00593-202ENST00000560853 CELF3Q5SZQ8 465 aaKnown RBP17.31■□□□□ 0.36
LINC00593-202ENST00000560853 GDF6Q6KF10 455 aaPredicted RBP17.31■□□□□ 0.36
LINC00593-202ENST00000560853 CCDC82Q8N4S0 544 aa17.31■□□□□ 0.36
LINC00593-202ENST00000560853 SMARCC2Q8TAQ2 1214 aa17.31■□□□□ 0.36
LINC00593-202ENST00000560853 CUL5Q93034 780 aa17.31■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms