RNA–Protein interactions for RNA: ENST00000560658.5

TRPM1-211, Transcript of transient receptor potential cation channel subfamily M member 1, humanhuman

TSL 2

Gene TRPM1, Length 1,649 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPM1-211ENST00000560658 TRIM10Q9UDY6 481 aa19.65■□□□□ 0.74
TRPM1-211ENST00000560658 PCDHA13Q9Y5I0 950 aa19.65■□□□□ 0.74
TRPM1-211ENST00000560658 STK24Q9Y6E0 443 aa19.65■□□□□ 0.74
TRPM1-211ENST00000560658 IGKV6D-41A0A0C4DH26 115 aa19.64■□□□□ 0.73
TRPM1-211ENST00000560658 MYMKA6NI61 221 aa19.64■□□□□ 0.73
TRPM1-211ENST00000560658 GPSM2P81274 684 aa19.64■□□□□ 0.73
TRPM1-211ENST00000560658 NFIXQ14938 502 aa19.64■□□□□ 0.73
TRPM1-211ENST00000560658 SLC4A8Q2Y0W8 1093 aa19.64■□□□□ 0.73
TRPM1-211ENST00000560658 GPATCH4Q5T3I0 446 aaKnown RBP19.64■□□□□ 0.73
TRPM1-211ENST00000560658 DEF6Q9H4E7 631 aa19.64■□□□□ 0.73
TRPM1-211ENST00000560658 BIN2Q9UBW5 565 aaPredicted RBP19.64■□□□□ 0.73
TRPM1-211ENST00000560658 HYOU1Q9Y4L1 999 aa19.64■□□□□ 0.73
TRPM1-211ENST00000560658 LY75O60449 1722 aa19.64■□□□□ 0.73
TRPM1-211ENST00000560658 TULP2O00295 520 aa19.63■□□□□ 0.73
TRPM1-211ENST00000560658 LMAN1P49257 510 aa19.63■□□□□ 0.73
TRPM1-211ENST00000560658 GABPAQ06546 454 aa19.63■□□□□ 0.73
TRPM1-211ENST00000560658 CCDC96Q2M329 555 aa19.63■□□□□ 0.73
TRPM1-211ENST00000560658 GLE1Q53GS7 698 aaKnown RBP19.63■□□□□ 0.73
TRPM1-211ENST00000560658 NEK11Q8NG66 645 aa19.63■□□□□ 0.73
TRPM1-211ENST00000560658 SNX29Q8TEQ0 813 aa19.63■□□□□ 0.73
TRPM1-211ENST00000560658 COG1Q8WTW3 980 aa19.63■□□□□ 0.73
TRPM1-211ENST00000560658 CCDC102AQ96A19 550 aa19.63■□□□□ 0.73
TRPM1-211ENST00000560658 LACRTQ9GZZ8 138 aa19.63■□□□□ 0.73
TRPM1-211ENST00000560658 SLC39A2Q9NP94 309 aa19.63■□□□□ 0.73
TRPM1-211ENST00000560658 CDK5RAP2Q96SN8 1893 aa19.62■□□□□ 0.73
TRPM1-211ENST00000560658 USP17L5A8MUK1 530 aa19.62■□□□□ 0.73
TRPM1-211ENST00000560658 HOXA10P31260 410 aaPredicted RBP19.62■□□□□ 0.73
TRPM1-211ENST00000560658 KIF11P52732 1056 aa19.62■□□□□ 0.73
TRPM1-211ENST00000560658 FKBP3Q00688 224 aaKnown RBP19.62■□□□□ 0.73
TRPM1-211ENST00000560658 GRIK5Q16478 980 aa19.62■□□□□ 0.73
TRPM1-211ENST00000560658 MFSD14BQ5SR56 506 aa19.62■□□□□ 0.73
TRPM1-211ENST00000560658 MYOCDQ8IZQ8 938 aa19.62■□□□□ 0.73
TRPM1-211ENST00000560658 CUL5Q93034 780 aa19.62■□□□□ 0.73
TRPM1-211ENST00000560658 BAZ2BQ9UIF8 2168 aaKnown RBP19.62■□□□□ 0.73
TRPM1-211ENST00000560658 RBAK-RBAKDNI3L0D1 243 aa19.62■□□□□ 0.73
TRPM1-211ENST00000560658 ENC1O14682 589 aa19.62■□□□□ 0.73
TRPM1-211ENST00000560658 AKR1B10O60218 316 aa19.62■□□□□ 0.73
TRPM1-211ENST00000560658 TTLL1O95922 423 aa19.62■□□□□ 0.73
TRPM1-211ENST00000560658 MARSP56192 900 aaKnown RBP19.62■□□□□ 0.73
TRPM1-211ENST00000560658 CCNI2Q6ZMN8 369 aaPredicted RBP19.62■□□□□ 0.73
TRPM1-211ENST00000560658 PPP4R3CPQ6ZMV5 832 aa19.62■□□□□ 0.73
TRPM1-211ENST00000560658 CRAMP1Q96RY5 1269 aa19.62■□□□□ 0.73
TRPM1-211ENST00000560658 CRACR2AQ9BSW2 395 aa19.62■□□□□ 0.73
TRPM1-211ENST00000560658 JADE2Q9NQC1 790 aa19.62■□□□□ 0.73
TRPM1-211ENST00000560658 FAM184BQ9ULE4 1060 aa19.62■□□□□ 0.73
TRPM1-211ENST00000560658 MTMR7Q9Y216 660 aa19.62■□□□□ 0.73
TRPM1-211ENST00000560658 AFF2P51816 1311 aa19.62■□□□□ 0.73
TRPM1-211ENST00000560658 FOCADQ5VW36 1801 aa19.61■□□□□ 0.73
TRPM1-211ENST00000560658 A0A0U1RQG5 324 aaPredicted RBP19.61■□□□□ 0.73
TRPM1-211ENST00000560658 TNFRSF8P28908 595 aa19.61■□□□□ 0.73
TRPM1-211ENST00000560658 CLK2P49760 499 aaKnown RBP19.61■□□□□ 0.73
TRPM1-211ENST00000560658 ZNF543Q08ER8 600 aa19.61■□□□□ 0.73
TRPM1-211ENST00000560658 PRR5LQ6MZQ0 368 aa19.61■□□□□ 0.73
TRPM1-211ENST00000560658 PDXDC1Q6P996 788 aa19.61■□□□□ 0.73
TRPM1-211ENST00000560658 LRRC55Q6ZSA7 311 aa19.61■□□□□ 0.73
TRPM1-211ENST00000560658 C2CD5Q86YS7 1000 aa19.61■□□□□ 0.73
TRPM1-211ENST00000560658 CCDC65Q8IXS2 484 aa19.61■□□□□ 0.73
TRPM1-211ENST00000560658 TAF1LQ8IZX4 1826 aa19.61■□□□□ 0.73
TRPM1-211ENST00000560658 VAT1LQ9HCJ6 419 aa19.61■□□□□ 0.73
TRPM1-211ENST00000560658 CEP72Q9P209 647 aa19.61■□□□□ 0.73
TRPM1-211ENST00000560658 ARHGAP20Q9P2F6 1191 aa19.61■□□□□ 0.73
TRPM1-211ENST00000560658 HDAC6Q9UBN7 1215 aa19.61■□□□□ 0.73
TRPM1-211ENST00000560658 THSD7AQ9UPZ6 1657 aa19.61■□□□□ 0.73
TRPM1-211ENST00000560658 FAN1Q9Y2M0 1017 aa19.61■□□□□ 0.73
TRPM1-211ENST00000560658 COL4A3BPQ9Y5P4 624 aa19.61■□□□□ 0.73
TRPM1-211ENST00000560658 A6NNZ2 444 aa19.6■□□□□ 0.73
TRPM1-211ENST00000560658 PAFAH1B1P43034 410 aa19.6■□□□□ 0.73
TRPM1-211ENST00000560658 TUBB8Q3ZCM7 444 aa19.6■□□□□ 0.73
TRPM1-211ENST00000560658 MOXD1Q6UVY6 613 aa19.6■□□□□ 0.73
TRPM1-211ENST00000560658 CACNA2D4Q7Z3S7 1137 aa19.6■□□□□ 0.73
TRPM1-211ENST00000560658 DDX12PQ92771 950 aa19.6■□□□□ 0.73
TRPM1-211ENST00000560658 MMRN2Q9H8L6 949 aa19.6■□□□□ 0.73
TRPM1-211ENST00000560658 HPCAL4Q9UM19 191 aa19.6■□□□□ 0.73
TRPM1-211ENST00000560658 RCCD1A6NED2 376 aa19.59■□□□□ 0.73
TRPM1-211ENST00000560658 LRRIQ3A6PVS8 624 aaPredicted RBP19.59■□□□□ 0.73
TRPM1-211ENST00000560658 CAPN2P17655 700 aa19.59■□□□□ 0.73
TRPM1-211ENST00000560658 EIF4A3P38919 411 aaKnown RBP19.59■□□□□ 0.73
TRPM1-211ENST00000560658 MAGEA1P43355 309 aa19.59■□□□□ 0.73
TRPM1-211ENST00000560658 KLK7P49862 253 aa19.59■□□□□ 0.73
TRPM1-211ENST00000560658 KCNQ4P56696 695 aa19.59■□□□□ 0.73
TRPM1-211ENST00000560658 SLC9C1Q4G0N8 1177 aa19.59■□□□□ 0.73
TRPM1-211ENST00000560658 TEX2Q8IWB9 1127 aa19.59■□□□□ 0.73
TRPM1-211ENST00000560658 CCDC24Q8N4L8 307 aa19.59■□□□□ 0.73
TRPM1-211ENST00000560658 KCTD17Q8N5Z5 321 aa19.59■□□□□ 0.73
TRPM1-211ENST00000560658 MTMR8Q96EF0 704 aa19.59■□□□□ 0.73
TRPM1-211ENST00000560658 NOX5Q96PH1 765 aa19.59■□□□□ 0.73
TRPM1-211ENST00000560658 MACROD2A1Z1Q3 448 aa19.58■□□□□ 0.73
TRPM1-211ENST00000560658 SERPING1P05155 500 aa19.58■□□□□ 0.73
TRPM1-211ENST00000560658 TNNT3P45378 269 aaPredicted RBP19.58■□□□□ 0.73
TRPM1-211ENST00000560658 USP11P51784 963 aa19.58■□□□□ 0.73
TRPM1-211ENST00000560658 SLC20A2Q08357 652 aa19.58■□□□□ 0.73
TRPM1-211ENST00000560658 NNTQ13423 1086 aa19.58■□□□□ 0.73
TRPM1-211ENST00000560658 ZCWPW2Q504Y3 356 aa19.58■□□□□ 0.73
TRPM1-211ENST00000560658 CREG2Q8IUH2 290 aa19.58■□□□□ 0.73
TRPM1-211ENST00000560658 AFAP1L1Q8TED9 768 aa19.58■□□□□ 0.73
TRPM1-211ENST00000560658 BAP1Q92560 729 aa19.58■□□□□ 0.73
TRPM1-211ENST00000560658 CCDC17Q96LX7 622 aa19.58■□□□□ 0.73
TRPM1-211ENST00000560658 COA1Q9GZY4 146 aa19.58■□□□□ 0.73
TRPM1-211ENST00000560658 UBA5Q9GZZ9 404 aa19.58■□□□□ 0.73
TRPM1-211ENST00000560658 TMEM260Q9NX78 707 aa19.58■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms