RNA–Protein interactions for RNA: ENST00000560631.1

RNF31-222, Transcript of ring finger protein 31, human

TSL 2

Gene RNF31, Length 320 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RNF31-222	ENST00000560631	SHISA4	Q96DD7	197 aa		9.26	□□□□□ -0.93
RNF31-222	ENST00000560631	DEFB118	Q96PH6	123 aa		9.26	□□□□□ -0.93
RNF31-222	ENST00000560631	PURB	Q96QR8	312 aa	Known RBP	9.26	□□□□□ -0.93
RNF31-222	ENST00000560631	TAAR1	Q96RJ0	339 aa		9.26	□□□□□ -0.93
RNF31-222	ENST00000560631	MPHOSPH6	Q99547	160 aa	Known RBP	9.26	□□□□□ -0.93
RNF31-222	ENST00000560631	SLK	Q9H2G2	1235 aa	Predicted RBP	9.26	□□□□□ -0.93
RNF31-222	ENST00000560631	NCOA5	Q9HCD5	579 aa	Known RBP	9.26	□□□□□ -0.93
RNF31-222	ENST00000560631	SH3GLB2	Q9NR46	395 aa		9.26	□□□□□ -0.93
RNF31-222	ENST00000560631	COL20A1	Q9P218	1284 aa		9.26	□□□□□ -0.93
RNF31-222	ENST00000560631	FAM184B	Q9ULE4	1060 aa		9.26	□□□□□ -0.93
RNF31-222	ENST00000560631	CNPY2	Q9Y2B0	182 aa		9.26	□□□□□ -0.93
RNF31-222	ENST00000560631	hCG_1642624	A0A1W2PR95	340 aa		9.25	□□□□□ -0.93
RNF31-222	ENST00000560631	STXBP3	O00186	592 aa		9.25	□□□□□ -0.93
RNF31-222	ENST00000560631	DUSP11	O75319	330 aa	Known RBP	9.25	□□□□□ -0.93
RNF31-222	ENST00000560631	AKAP17A	Q02040	695 aa	Known RBP	9.25	□□□□□ -0.93
RNF31-222	ENST00000560631	SSRP1	Q08945	709 aa	Known RBP	9.25	□□□□□ -0.93
RNF31-222	ENST00000560631	SCRN1	Q12765	414 aa		9.25	□□□□□ -0.93
RNF31-222	ENST00000560631	ME3	Q16798	604 aa		9.25	□□□□□ -0.93
RNF31-222	ENST00000560631	TAPT1	Q6NXT6	567 aa		9.25	□□□□□ -0.93
RNF31-222	ENST00000560631	PIBF1	Q8WXW3	757 aa		9.25	□□□□□ -0.93
RNF31-222	ENST00000560631	CUL5	Q93034	780 aa		9.25	□□□□□ -0.93
RNF31-222	ENST00000560631	ZSCAN31	Q96LW9	406 aa	Predicted RBP	9.25	□□□□□ -0.93
RNF31-222	ENST00000560631	RMDN3	Q96TC7	470 aa		9.25	□□□□□ -0.93
RNF31-222	ENST00000560631	PDCD2L	Q9BRP1	358 aa		9.25	□□□□□ -0.93
RNF31-222	ENST00000560631	LARP6	Q9BRS8	491 aa	Known RBP	9.25	□□□□□ -0.93
RNF31-222	ENST00000560631	ZMYND12	Q9H0C1	365 aa		9.25	□□□□□ -0.93
RNF31-222	ENST00000560631	PSTPIP2	Q9H939	334 aa		9.25	□□□□□ -0.93
RNF31-222	ENST00000560631	RIC8A	Q9NPQ8	531 aa		9.25	□□□□□ -0.93
RNF31-222	ENST00000560631	PXMP2	Q9NR77	195 aa		9.25	□□□□□ -0.93
RNF31-222	ENST00000560631	LIMCH1	Q9UPQ0	1083 aa		9.25	□□□□□ -0.93
RNF31-222	ENST00000560631		Q9Y3F1	56 aa		9.25	□□□□□ -0.93
RNF31-222	ENST00000560631	STK36	Q9NRP7	1315 aa		9.25	□□□□□ -0.93
RNF31-222	ENST00000560631	C2orf72	A6NCS6	295 aa		9.24	□□□□□ -0.93
RNF31-222	ENST00000560631	CPLX1	O14810	134 aa		9.24	□□□□□ -0.93
RNF31-222	ENST00000560631	STAM2	O75886	525 aa		9.24	□□□□□ -0.93
RNF31-222	ENST00000560631	CDKL5	O76039	1030 aa		9.24	□□□□□ -0.93
RNF31-222	ENST00000560631	DEXI	O95424	95 aa		9.24	□□□□□ -0.93
RNF31-222	ENST00000560631	FOS	P01100	380 aa	Predicted RBP	9.24	□□□□□ -0.93
RNF31-222	ENST00000560631	TFRC	P02786	760 aa	Known RBP	9.24	□□□□□ -0.93
RNF31-222	ENST00000560631	NR3C2	P08235	984 aa		9.24	□□□□□ -0.93
RNF31-222	ENST00000560631	CNGA1	P29973	690 aa		9.24	□□□□□ -0.93
RNF31-222	ENST00000560631	CLK2	P49760	499 aa	Known RBP	9.24	□□□□□ -0.93
RNF31-222	ENST00000560631	SOX10	P56693	466 aa		9.24	□□□□□ -0.93
RNF31-222	ENST00000560631	STXBP2	Q15833	593 aa		9.24	□□□□□ -0.93
RNF31-222	ENST00000560631	CCDC144B	Q3MJ40	725 aa		9.24	□□□□□ -0.93
RNF31-222	ENST00000560631	ARHGEF16	Q5VV41	709 aa		9.24	□□□□□ -0.93
RNF31-222	ENST00000560631	MCTP2	Q6DN12	878 aa		9.24	□□□□□ -0.93
RNF31-222	ENST00000560631	TYW1B	Q6NUM6	668 aa		9.24	□□□□□ -0.93
RNF31-222	ENST00000560631	XRRA1	Q6P2D8	792 aa		9.24	□□□□□ -0.93
RNF31-222	ENST00000560631	HEATR3	Q7Z4Q2	680 aa		9.24	□□□□□ -0.93
RNF31-222	ENST00000560631	VSIG10L	Q86VR7	867 aa		9.24	□□□□□ -0.93
RNF31-222	ENST00000560631	TRIM22	Q8IYM9	498 aa		9.24	□□□□□ -0.93
RNF31-222	ENST00000560631	CCDC12	Q8WUD4	166 aa	Predicted RBP	9.24	□□□□□ -0.93
RNF31-222	ENST00000560631	PHKB	Q93100	1093 aa		9.24	□□□□□ -0.93
RNF31-222	ENST00000560631	GTF3C6	Q969F1	213 aa		9.24	□□□□□ -0.93
RNF31-222	ENST00000560631	SLC26A6	Q9BXS9	759 aa		9.24	□□□□□ -0.93
RNF31-222	ENST00000560631	UPF3A	Q9H1J1	476 aa	Known RBP	9.24	□□□□□ -0.93
RNF31-222	ENST00000560631	SH2B1	Q9NRF2	756 aa	Predicted RBP	9.24	□□□□□ -0.93
RNF31-222	ENST00000560631	GNE	Q9Y223	722 aa	Known RBP	9.24	□□□□□ -0.93
RNF31-222	ENST00000560631	ALPK3	Q96L96	1907 aa		9.23	□□□□□ -0.93
RNF31-222	ENST00000560631	KAT6A	Q92794	2004 aa		9.23	□□□□□ -0.93
RNF31-222	ENST00000560631	SMCO2	A6NFE2	343 aa		9.23	□□□□□ -0.93
RNF31-222	ENST00000560631	NKRF	O15226	690 aa	Known RBP eCLIP	9.23	□□□□□ -0.93
RNF31-222	ENST00000560631	EIF3J	O75822	258 aa	Known RBP	9.23	□□□□□ -0.93
RNF31-222	ENST00000560631	LARGE1	O95461	756 aa		9.23	□□□□□ -0.93
RNF31-222	ENST00000560631	CTDNEP1	O95476	244 aa		9.23	□□□□□ -0.93
RNF31-222	ENST00000560631	MYC	P01106	439 aa	Predicted RBP	9.23	□□□□□ -0.93
RNF31-222	ENST00000560631	RARB	P10826	455 aa		9.23	□□□□□ -0.93
RNF31-222	ENST00000560631	CST5	P28325	142 aa	Predicted RBP	9.23	□□□□□ -0.93
RNF31-222	ENST00000560631	HOXA13	P31271	388 aa	Predicted RBP	9.23	□□□□□ -0.93
RNF31-222	ENST00000560631	MCM2	P49736	904 aa		9.23	□□□□□ -0.93
RNF31-222	ENST00000560631	NAPA	P54920	295 aa		9.23	□□□□□ -0.93
RNF31-222	ENST00000560631	GJA9	P57773	515 aa		9.23	□□□□□ -0.93
RNF31-222	ENST00000560631	PDE4D	Q08499	809 aa		9.23	□□□□□ -0.93
RNF31-222	ENST00000560631	STK3	Q13188	491 aa		9.23	□□□□□ -0.93
RNF31-222	ENST00000560631	PGM5	Q15124	567 aa		9.23	□□□□□ -0.93
RNF31-222	ENST00000560631	CCDC62	Q6P9F0	684 aa		9.23	□□□□□ -0.93
RNF31-222	ENST00000560631	USP17L6P	Q6QN14	398 aa		9.23	□□□□□ -0.93
RNF31-222	ENST00000560631	ARRDC4	Q8NCT1	418 aa		9.23	□□□□□ -0.93
RNF31-222	ENST00000560631	KLHDC9	Q8NEP7	349 aa		9.23	□□□□□ -0.93
RNF31-222	ENST00000560631	GPKOW	Q92917	476 aa	Predicted RBP eCLIP	9.23	□□□□□ -0.93
RNF31-222	ENST00000560631	TSEN34	Q9BSV6	310 aa	Known RBP	9.23	□□□□□ -0.93
RNF31-222	ENST00000560631	ZHX1	Q9UKY1	873 aa	Predicted RBP	9.23	□□□□□ -0.93
RNF31-222	ENST00000560631	SCN10A	Q9Y5Y9	1956 aa		9.23	□□□□□ -0.93
RNF31-222	ENST00000560631	DNM1L	O00429	736 aa		9.22	□□□□□ -0.93
RNF31-222	ENST00000560631	ADCY6	O43306	1168 aa		9.22	□□□□□ -0.93
RNF31-222	ENST00000560631	ADAMTS4	O75173	837 aa		9.22	□□□□□ -0.93
RNF31-222	ENST00000560631	FARP2	O94887	1054 aa	Predicted RBP	9.22	□□□□□ -0.93
RNF31-222	ENST00000560631	TGFB3	P10600	412 aa		9.22	□□□□□ -0.93
RNF31-222	ENST00000560631	COL6A1	P12109	1028 aa		9.22	□□□□□ -0.93
RNF31-222	ENST00000560631	EIF2AK2	P19525	551 aa	Known RBP	9.22	□□□□□ -0.93
RNF31-222	ENST00000560631	GNA11	P29992	359 aa		9.22	□□□□□ -0.93
RNF31-222	ENST00000560631	CCND2	P30279	289 aa		9.22	□□□□□ -0.93
RNF31-222	ENST00000560631	ICAM3	P32942	547 aa		9.22	□□□□□ -0.93
RNF31-222	ENST00000560631	ADCY7	P51828	1080 aa		9.22	□□□□□ -0.93
RNF31-222	ENST00000560631	TNFAIP2	Q03169	654 aa		9.22	□□□□□ -0.93
RNF31-222	ENST00000560631	ST3GAL1	Q11201	340 aa		9.22	□□□□□ -0.93
RNF31-222	ENST00000560631	AP3B2	Q13367	1082 aa		9.22	□□□□□ -0.93
RNF31-222	ENST00000560631	LRRC41	Q15345	812 aa		9.22	□□□□□ -0.93
RNF31-222	ENST00000560631	DUSP28	Q4G0W2	176 aa		9.22	□□□□□ -0.93

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