RNA–Protein interactions for RNA: ENST00000560521.5

RABGGTA-217, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 3

Gene RABGGTA, Length 680 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-217ENST00000560521 CTNNA3Q9UI47 895 aa10.6□□□□□ -0.71
RABGGTA-217ENST00000560521 H3BNC9 293 aa10.59□□□□□ -0.71
RABGGTA-217ENST00000560521 RNF113AO15541 343 aaKnown RBP10.59□□□□□ -0.71
RABGGTA-217ENST00000560521 NMT2O60551 498 aa10.59□□□□□ -0.71
RABGGTA-217ENST00000560521 EFCAB14O75071 495 aa10.59□□□□□ -0.71
RABGGTA-217ENST00000560521 MMP3P08254 477 aa10.59□□□□□ -0.71
RABGGTA-217ENST00000560521 SLC16A2P36021 539 aa10.59□□□□□ -0.71
RABGGTA-217ENST00000560521 PDE4BQ07343 736 aa10.59□□□□□ -0.71
RABGGTA-217ENST00000560521 GPM6BQ13491 265 aa10.59□□□□□ -0.71
RABGGTA-217ENST00000560521 TRIM71Q2Q1W2 868 aaKnown RBP10.59□□□□□ -0.71
RABGGTA-217ENST00000560521 ZNF618Q5T7W0 954 aa10.59□□□□□ -0.71
RABGGTA-217ENST00000560521 IER5LQ5T953 404 aa10.59□□□□□ -0.71
RABGGTA-217ENST00000560521 CCDC62Q6P9F0 684 aa10.59□□□□□ -0.71
RABGGTA-217ENST00000560521 BTNL9Q6UXG8 535 aa10.59□□□□□ -0.71
RABGGTA-217ENST00000560521 RNF207Q6ZRF8 634 aa10.59□□□□□ -0.71
RABGGTA-217ENST00000560521 EP400NLQ6ZTU2 488 aa10.59□□□□□ -0.71
RABGGTA-217ENST00000560521 KBTBD3Q8NAB2 608 aa10.59□□□□□ -0.71
RABGGTA-217ENST00000560521 AFG1LQ8WV93 481 aa10.59□□□□□ -0.71
RABGGTA-217ENST00000560521 WNT8BQ93098 351 aa10.59□□□□□ -0.71
RABGGTA-217ENST00000560521 INCENPQ9NQS7 918 aa10.59□□□□□ -0.71
RABGGTA-217ENST00000560521 HDAC6Q9UBN7 1215 aa10.59□□□□□ -0.71
RABGGTA-217ENST00000560521 GTF2IRD1Q9UHL9 959 aa10.59□□□□□ -0.71
RABGGTA-217ENST00000560521 MUTYHQ9UIF7 546 aa10.59□□□□□ -0.71
RABGGTA-217ENST00000560521 STX8Q9UNK0 236 aa10.59□□□□□ -0.71
RABGGTA-217ENST00000560521 MTMR7Q9Y216 660 aa10.59□□□□□ -0.71
RABGGTA-217ENST00000560521 TTC3P53804 2025 aa10.58□□□□□ -0.72
RABGGTA-217ENST00000560521 PLXNA4Q9HCM2 1894 aa10.58□□□□□ -0.72
RABGGTA-217ENST00000560521 ST18O60284 1047 aa10.58□□□□□ -0.72
RABGGTA-217ENST00000560521 HMMRO75330 724 aa10.58□□□□□ -0.72
RABGGTA-217ENST00000560521 GNAT2P19087 354 aa10.58□□□□□ -0.72
RABGGTA-217ENST00000560521 RPS6P62753 249 aaKnown RBP10.58□□□□□ -0.72
RABGGTA-217ENST00000560521 PPARAQ07869 468 aa10.58□□□□□ -0.72
RABGGTA-217ENST00000560521 PTPROQ16827 1216 aa10.58□□□□□ -0.72
RABGGTA-217ENST00000560521 TIGD5Q53EQ6 642 aa10.58□□□□□ -0.72
RABGGTA-217ENST00000560521 HERC4Q5GLZ8 1057 aaPredicted RBP10.58□□□□□ -0.72
RABGGTA-217ENST00000560521 DNERQ8NFT8 737 aa10.58□□□□□ -0.72
RABGGTA-217ENST00000560521 UPF3BQ9BZI7 483 aaKnown RBP10.58□□□□□ -0.72
RABGGTA-217ENST00000560521 CLDND1Q9NY35 253 aa10.58□□□□□ -0.72
RABGGTA-217ENST00000560521 FAM50BQ9Y247 325 aa10.58□□□□□ -0.72
RABGGTA-217ENST00000560521 MYO15AQ9UKN7 3530 aa10.58□□□□□ -0.72
RABGGTA-217ENST00000560521 ZDBF2Q9HCK1 2354 aa10.58□□□□□ -0.72
RABGGTA-217ENST00000560521 SMARCA5O60264 1052 aaPredicted RBP10.57□□□□□ -0.72
RABGGTA-217ENST00000560521 LGR5O75473 907 aa10.57□□□□□ -0.72
RABGGTA-217ENST00000560521 CASTP20810 708 aaKnown RBP10.57□□□□□ -0.72
RABGGTA-217ENST00000560521 NOVP48745 357 aa10.57□□□□□ -0.72
RABGGTA-217ENST00000560521 ZNF200P98182 395 aaPredicted RBP10.57□□□□□ -0.72
RABGGTA-217ENST00000560521 DLX2Q07687 328 aaPredicted RBP10.57□□□□□ -0.72
RABGGTA-217ENST00000560521 ARHGAP1Q07960 439 aa10.57□□□□□ -0.72
RABGGTA-217ENST00000560521 TCF15Q12870 199 aa10.57□□□□□ -0.72
RABGGTA-217ENST00000560521 HIC1Q14526 733 aa10.57□□□□□ -0.72
RABGGTA-217ENST00000560521 SMAD2Q15796 467 aaKnown RBP10.57□□□□□ -0.72
RABGGTA-217ENST00000560521 LY6KQ17RY6 165 aa10.57□□□□□ -0.72
RABGGTA-217ENST00000560521 CTC1Q2NKJ3 1217 aa10.57□□□□□ -0.72
RABGGTA-217ENST00000560521 SYDE2Q5VT97 1194 aa10.57□□□□□ -0.72
RABGGTA-217ENST00000560521 BMP8AQ7Z5Y6 402 aa10.57□□□□□ -0.72
RABGGTA-217ENST00000560521 RPAINQ86UA6 219 aa10.57□□□□□ -0.72
RABGGTA-217ENST00000560521 RNF135Q8IUD6 432 aa10.57□□□□□ -0.72
RABGGTA-217ENST00000560521 TMEM192Q8IY95 271 aa10.57□□□□□ -0.72
RABGGTA-217ENST00000560521 MYOCDQ8IZQ8 938 aa10.57□□□□□ -0.72
RABGGTA-217ENST00000560521 DBF4BQ8NFT6 615 aa10.57□□□□□ -0.72
RABGGTA-217ENST00000560521 EDAQ92838 391 aa10.57□□□□□ -0.72
RABGGTA-217ENST00000560521 SAMD11Q96NU1 681 aa10.57□□□□□ -0.72
RABGGTA-217ENST00000560521 SEC62Q99442 399 aaKnown RBP10.57□□□□□ -0.72
RABGGTA-217ENST00000560521 ALG1Q9BT22 464 aa10.57□□□□□ -0.72
RABGGTA-217ENST00000560521 NSUN3Q9H649 340 aaKnown RBP10.57□□□□□ -0.72
RABGGTA-217ENST00000560521 DDX52Q9Y2R4 599 aaKnown RBP eCLIP10.57□□□□□ -0.72
RABGGTA-217ENST00000560521 SPTBN4Q9H254 2564 aa10.57□□□□□ -0.72
RABGGTA-217ENST00000560521 HAS3O00219 553 aa10.56□□□□□ -0.72
RABGGTA-217ENST00000560521 MBTPS2O43462 519 aa10.56□□□□□ -0.72
RABGGTA-217ENST00000560521 GH1P01241 217 aa10.56□□□□□ -0.72
RABGGTA-217ENST00000560521 AMHP03971 560 aa10.56□□□□□ -0.72
RABGGTA-217ENST00000560521 SLC3A2P08195 630 aaKnown RBP10.56□□□□□ -0.72
RABGGTA-217ENST00000560521 PSEN2P49810 448 aa10.56□□□□□ -0.72
RABGGTA-217ENST00000560521 PTPN5P54829 565 aa10.56□□□□□ -0.72
RABGGTA-217ENST00000560521 CTDSPL2Q05D32 466 aa10.56□□□□□ -0.72
RABGGTA-217ENST00000560521 PTK7Q13308 1070 aa10.56□□□□□ -0.72
RABGGTA-217ENST00000560521 CCDC96Q2M329 555 aa10.56□□□□□ -0.72
RABGGTA-217ENST00000560521 PPP4R3BQ5MIZ7 849 aa10.56□□□□□ -0.72
RABGGTA-217ENST00000560521 SEPT14Q6ZU15 432 aa10.56□□□□□ -0.72
RABGGTA-217ENST00000560521 CHST3Q7LGC8 479 aa10.56□□□□□ -0.72
RABGGTA-217ENST00000560521 C7orf31Q8N865 590 aa10.56□□□□□ -0.72
RABGGTA-217ENST00000560521 DCAF4Q8WV16 495 aa10.56□□□□□ -0.72
RABGGTA-217ENST00000560521 TOP1MTQ969P6 601 aa10.56□□□□□ -0.72
RABGGTA-217ENST00000560521 MPHOSPH6Q99547 160 aaKnown RBP10.56□□□□□ -0.72
RABGGTA-217ENST00000560521 ALG13Q9NP73 1137 aaKnown RBP10.56□□□□□ -0.72
RABGGTA-217ENST00000560521 ZBTB40Q9NUA8 1239 aa10.56□□□□□ -0.72
RABGGTA-217ENST00000560521 DMDP11532 3685 aa10.55□□□□□ -0.72
RABGGTA-217ENST00000560521 TSPY2A6NKD2 308 aa10.55□□□□□ -0.72
RABGGTA-217ENST00000560521 ZFYP08048 801 aaPredicted RBP10.55□□□□□ -0.72
RABGGTA-217ENST00000560521 CLUL1Q15846 466 aa10.55□□□□□ -0.72
RABGGTA-217ENST00000560521 DGKDQ16760 1214 aa10.55□□□□□ -0.72
RABGGTA-217ENST00000560521 KIAA0753Q2KHM9 967 aa10.55□□□□□ -0.72
RABGGTA-217ENST00000560521 PLEKHG4Q58EX7 1191 aa10.55□□□□□ -0.72
RABGGTA-217ENST00000560521 FBXO11Q86XK2 927 aa10.55□□□□□ -0.72
RABGGTA-217ENST00000560521 TBC1D5Q92609 795 aa10.55□□□□□ -0.72
RABGGTA-217ENST00000560521 PBXIP1Q96AQ6 731 aa10.55□□□□□ -0.72
RABGGTA-217ENST00000560521 OSBPL7Q9BZF2 842 aa10.55□□□□□ -0.72
RABGGTA-217ENST00000560521 NAPBQ9H115 298 aa10.55□□□□□ -0.72
RABGGTA-217ENST00000560521 GPCPD1Q9NPB8 672 aa10.55□□□□□ -0.72
RABGGTA-217ENST00000560521 ECHDC1Q9NTX5 307 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms