RNA–Protein interactions for RNA: ENST00000560492.1

CDC42BPB-207, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 2

Gene CDC42BPB, Length 646 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-207ENST00000560492 PNMA2Q9UL42 364 aa12.32□□□□□ -0.44
CDC42BPB-207ENST00000560492 PCDHB8Q9UN66 801 aa12.32□□□□□ -0.44
CDC42BPB-207ENST00000560492 RBM47A0AV96 593 aaKnown RBP12.31□□□□□ -0.44
CDC42BPB-207ENST00000560492 DHX16O60231 1041 aaKnown RBP12.31□□□□□ -0.44
CDC42BPB-207ENST00000560492 POU3F3P20264 500 aaPredicted RBP12.31□□□□□ -0.44
CDC42BPB-207ENST00000560492 HAND2P61296 217 aa12.31□□□□□ -0.44
CDC42BPB-207ENST00000560492 WDR5P61964 334 aaKnown RBP12.31□□□□□ -0.44
CDC42BPB-207ENST00000560492 BTNL9Q6UXG8 535 aa12.31□□□□□ -0.44
CDC42BPB-207ENST00000560492 LRRC8DQ7L1W4 858 aa12.31□□□□□ -0.44
CDC42BPB-207ENST00000560492 SPRED2Q7Z698 418 aa12.31□□□□□ -0.44
CDC42BPB-207ENST00000560492 DNERQ8NFT8 737 aa12.31□□□□□ -0.44
CDC42BPB-207ENST00000560492 CAGE1Q8TC20 777 aa12.31□□□□□ -0.44
CDC42BPB-207ENST00000560492 AFAP1L1Q8TED9 768 aa12.31□□□□□ -0.44
CDC42BPB-207ENST00000560492 AFG1LQ8WV93 481 aa12.31□□□□□ -0.44
CDC42BPB-207ENST00000560492 CLEC4DQ8WXI8 215 aa12.31□□□□□ -0.44
CDC42BPB-207ENST00000560492 ALG1Q9BT22 464 aa12.31□□□□□ -0.44
CDC42BPB-207ENST00000560492 LCHNA4D1U4 455 aa12.3□□□□□ -0.44
CDC42BPB-207ENST00000560492 A6NJR5 290 aa12.3□□□□□ -0.44
CDC42BPB-207ENST00000560492 ORC4O43929 436 aa12.3□□□□□ -0.44
CDC42BPB-207ENST00000560492 ARIH2O95376 493 aa12.3□□□□□ -0.44
CDC42BPB-207ENST00000560492 GH1P01241 217 aa12.3□□□□□ -0.44
CDC42BPB-207ENST00000560492 PDHBP11177 359 aa12.3□□□□□ -0.44
CDC42BPB-207ENST00000560492 SSTR3P32745 418 aaPredicted RBP12.3□□□□□ -0.44
CDC42BPB-207ENST00000560492 DEFB103AP81534 67 aa12.3□□□□□ -0.44
CDC42BPB-207ENST00000560492 LY6KQ17RY6 165 aa12.3□□□□□ -0.44
CDC42BPB-207ENST00000560492 GDF6Q6KF10 455 aaPredicted RBP12.3□□□□□ -0.44
CDC42BPB-207ENST00000560492 C7orf31Q8N865 590 aa12.3□□□□□ -0.44
CDC42BPB-207ENST00000560492 ANAPC4Q9UJX5 808 aa12.3□□□□□ -0.44
CDC42BPB-207ENST00000560492 MMP3P08254 477 aa12.29□□□□□ -0.44
CDC42BPB-207ENST00000560492 GOLGA8HP0CJ92 632 aa12.29□□□□□ -0.44
CDC42BPB-207ENST00000560492 SELPP16109 830 aa12.29□□□□□ -0.44
CDC42BPB-207ENST00000560492 CASTP20810 708 aaKnown RBP12.29□□□□□ -0.44
CDC42BPB-207ENST00000560492 ZNF543Q08ER8 600 aa12.29□□□□□ -0.44
CDC42BPB-207ENST00000560492 CNKSR3Q6P9H4 555 aa12.29□□□□□ -0.44
CDC42BPB-207ENST00000560492 MFSD6Q6ZSS7 791 aa12.29□□□□□ -0.44
CDC42BPB-207ENST00000560492 EP400NLQ6ZTU2 488 aa12.29□□□□□ -0.44
CDC42BPB-207ENST00000560492 DHX37Q8IY37 1157 aaKnown RBP12.29□□□□□ -0.44
CDC42BPB-207ENST00000560492 UIMC1Q96RL1 719 aa12.29□□□□□ -0.44
CDC42BPB-207ENST00000560492 TGS1Q96RS0 853 aaKnown RBP12.29□□□□□ -0.44
CDC42BPB-207ENST00000560492 WDR19Q8NEZ3 1342 aa12.29□□□□□ -0.44
CDC42BPB-207ENST00000560492 FOXP2O15409 715 aa12.28□□□□□ -0.44
CDC42BPB-207ENST00000560492 SORBS3O60504 671 aa12.28□□□□□ -0.44
CDC42BPB-207ENST00000560492 EDNRBP24530 442 aa12.28□□□□□ -0.44
CDC42BPB-207ENST00000560492 IKBKEQ14164 716 aa12.28□□□□□ -0.44
CDC42BPB-207ENST00000560492 DGKDQ16760 1214 aa12.28□□□□□ -0.44
CDC42BPB-207ENST00000560492 ARHGEF16Q5VV41 709 aa12.28□□□□□ -0.44
CDC42BPB-207ENST00000560492 EVI5LQ96CN4 794 aa12.28□□□□□ -0.44
CDC42BPB-207ENST00000560492 ZKSCAN3Q9BRR0 538 aa12.28□□□□□ -0.44
CDC42BPB-207ENST00000560492 UBA5Q9GZZ9 404 aa12.28□□□□□ -0.44
CDC42BPB-207ENST00000560492 CPVLQ9H3G5 476 aa12.28□□□□□ -0.44
CDC42BPB-207ENST00000560492 HELLSQ9NRZ9 838 aa12.28□□□□□ -0.44
CDC42BPB-207ENST00000560492 MICAL3Q7RTP6 2002 aa12.27□□□□□ -0.44
CDC42BPB-207ENST00000560492 TRIM6-TRIM34B2RNG4 842 aa12.27□□□□□ -0.45
CDC42BPB-207ENST00000560492 PARNO95453 639 aaKnown RBP12.27□□□□□ -0.45
CDC42BPB-207ENST00000560492 FGAP02671 866 aa12.27□□□□□ -0.45
CDC42BPB-207ENST00000560492 ZNF286BP0CG31 522 aa12.27□□□□□ -0.45
CDC42BPB-207ENST00000560492 CKBP12277 381 aa12.27□□□□□ -0.45
CDC42BPB-207ENST00000560492 EIF2AK2P19525 551 aaKnown RBP12.27□□□□□ -0.45
CDC42BPB-207ENST00000560492 KCNA5P22460 613 aa12.27□□□□□ -0.45
CDC42BPB-207ENST00000560492 PSEN2P49810 448 aa12.27□□□□□ -0.45
CDC42BPB-207ENST00000560492 STXBP2Q15833 593 aa12.27□□□□□ -0.45
CDC42BPB-207ENST00000560492 CDC37Q16543 378 aaPredicted RBP12.27□□□□□ -0.45
CDC42BPB-207ENST00000560492 CSPP1Q1MSJ5 1256 aa12.27□□□□□ -0.45
CDC42BPB-207ENST00000560492 GPATCH4Q5T3I0 446 aaKnown RBP12.27□□□□□ -0.45
CDC42BPB-207ENST00000560492 ANKRD45Q5TZF3 282 aa12.27□□□□□ -0.45
CDC42BPB-207ENST00000560492 FBXO22Q8NEZ5 403 aa12.27□□□□□ -0.45
CDC42BPB-207ENST00000560492 NSUN6Q8TEA1 469 aaKnown RBP12.27□□□□□ -0.45
CDC42BPB-207ENST00000560492 FAM227BQ96M60 508 aa12.27□□□□□ -0.45
CDC42BPB-207ENST00000560492 TAAR1Q96RJ0 339 aa12.27□□□□□ -0.45
CDC42BPB-207ENST00000560492 RMDN3Q96TC7 470 aa12.27□□□□□ -0.45
CDC42BPB-207ENST00000560492 RAD9AQ99638 391 aa12.27□□□□□ -0.45
CDC42BPB-207ENST00000560492 KATNAL1Q9BW62 490 aa12.27□□□□□ -0.45
CDC42BPB-207ENST00000560492 UBE2ZQ9H832 354 aaPredicted RBP12.27□□□□□ -0.45
CDC42BPB-207ENST00000560492 TCP11L1Q9NUJ3 509 aa12.27□□□□□ -0.45
CDC42BPB-207ENST00000560492 HDAC6Q9UBN7 1215 aa12.27□□□□□ -0.45
CDC42BPB-207ENST00000560492 MRVI1Q9Y6F6 885 aa12.27□□□□□ -0.45
CDC42BPB-207ENST00000560492 ABCB11O95342 1321 aa12.27□□□□□ -0.45
CDC42BPB-207ENST00000560492 NLRC5Q86WI3 1866 aa12.27□□□□□ -0.45
CDC42BPB-207ENST00000560492 BRWD1Q9NSI6 2320 aa12.26□□□□□ -0.45
CDC42BPB-207ENST00000560492 A0A0D9SFI3 127 aa12.26□□□□□ -0.45
CDC42BPB-207ENST00000560492 ABHD14A-ACY1A0A1B0GW23 586 aa12.26□□□□□ -0.45
CDC42BPB-207ENST00000560492 LPXNO60711 386 aa12.26□□□□□ -0.45
CDC42BPB-207ENST00000560492 EFCAB14O75071 495 aa12.26□□□□□ -0.45
CDC42BPB-207ENST00000560492 GJB5O95377 273 aa12.26□□□□□ -0.45
CDC42BPB-207ENST00000560492 NOVP48745 357 aa12.26□□□□□ -0.45
CDC42BPB-207ENST00000560492 ARHGAP1Q07960 439 aa12.26□□□□□ -0.45
CDC42BPB-207ENST00000560492 MFSD10Q14728 455 aa12.26□□□□□ -0.45
CDC42BPB-207ENST00000560492 ALX1Q15699 326 aa12.26□□□□□ -0.45
CDC42BPB-207ENST00000560492 KIAA0753Q2KHM9 967 aa12.26□□□□□ -0.45
CDC42BPB-207ENST00000560492 MCMDC2Q4G0Z9 681 aa12.26□□□□□ -0.45
CDC42BPB-207ENST00000560492 MCF2L2Q86YR7 1114 aa12.26□□□□□ -0.45
CDC42BPB-207ENST00000560492 MYOCDQ8IZQ8 938 aa12.26□□□□□ -0.45
CDC42BPB-207ENST00000560492 DHX38Q92620 1227 aaKnown RBP12.26□□□□□ -0.45
CDC42BPB-207ENST00000560492 ESR2Q92731 530 aa12.26□□□□□ -0.45
CDC42BPB-207ENST00000560492 KHSRPQ92945 711 aaKnown RBP eCLIP12.26□□□□□ -0.45
CDC42BPB-207ENST00000560492 TTC14Q96N46 770 aa12.26□□□□□ -0.45
CDC42BPB-207ENST00000560492 RNF41Q9H4P4 317 aaPredicted RBP12.26□□□□□ -0.45
CDC42BPB-207ENST00000560492 KAT14Q9H8E8 782 aa12.26□□□□□ -0.45
CDC42BPB-207ENST00000560492 SUGCTQ9HAC7 445 aa12.26□□□□□ -0.45
CDC42BPB-207ENST00000560492 VAT1LQ9HCJ6 419 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms