RNA–Protein interactions for RNA: ENST00000560462.1

HERC1-208, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 647 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-208ENST00000560462 ABHD16BQ9H3Z7 469 aa7.98□□□□□ -1.13
HERC1-208ENST00000560462 CACNA2D2Q9NY47 1150 aa7.98□□□□□ -1.13
HERC1-208ENST00000560462 PCDHGC3Q9UN70 934 aa7.98□□□□□ -1.13
HERC1-208ENST00000560462 NR2E1Q9Y466 385 aa7.98□□□□□ -1.13
HERC1-208ENST00000560462 CTNNB1P35222 781 aa7.97□□□□□ -1.13
HERC1-208ENST00000560462 RHBDL3P58872 404 aa7.97□□□□□ -1.13
HERC1-208ENST00000560462 VAC14Q08AM6 782 aa7.97□□□□□ -1.13
HERC1-208ENST00000560462 METTL24Q5JXM2 366 aa7.97□□□□□ -1.13
HERC1-208ENST00000560462 FOXD4L5Q5VV16 416 aaPredicted RBP7.97□□□□□ -1.13
HERC1-208ENST00000560462 TLK2Q86UE8 772 aa7.97□□□□□ -1.13
HERC1-208ENST00000560462 PDZD3Q86UT5 571 aa7.97□□□□□ -1.13
HERC1-208ENST00000560462 FOXD4L4Q8WXT5 416 aaPredicted RBP7.97□□□□□ -1.13
HERC1-208ENST00000560462 ZCCHC14Q8WYQ9 949 aaKnown RBP7.97□□□□□ -1.13
HERC1-208ENST00000560462 FAM163AQ96GL9 167 aaPredicted RBP7.97□□□□□ -1.13
HERC1-208ENST00000560462 BORCS6Q96GS4 357 aa7.97□□□□□ -1.13
HERC1-208ENST00000560462 YME1L1Q96TA2 773 aa7.97□□□□□ -1.13
HERC1-208ENST00000560462 AP5M1Q9H0R1 490 aa7.97□□□□□ -1.13
HERC1-208ENST00000560462 PARD6AQ9NPB6 346 aa7.97□□□□□ -1.13
HERC1-208ENST00000560462 CDKN2AIPQ9NXV6 580 aaPredicted RBP7.97□□□□□ -1.13
HERC1-208ENST00000560462 TET1Q8NFU7 2136 aa7.97□□□□□ -1.13
HERC1-208ENST00000560462 ASTN1O14525 1302 aa7.97□□□□□ -1.13
HERC1-208ENST00000560462 PIEZO2Q9H5I5 2752 aa7.96□□□□□ -1.13
HERC1-208ENST00000560462 CNOT1A5YKK6 2376 aaKnown RBP7.96□□□□□ -1.13
HERC1-208ENST00000560462 C5orf67F2Z3F1 127 aa7.96□□□□□ -1.14
HERC1-208ENST00000560462 PDE8BO95263 885 aa7.96□□□□□ -1.14
HERC1-208ENST00000560462 GLP2RO95838 553 aa7.96□□□□□ -1.14
HERC1-208ENST00000560462 GH2P01242 217 aa7.96□□□□□ -1.14
HERC1-208ENST00000560462 AMHP03971 560 aa7.96□□□□□ -1.14
HERC1-208ENST00000560462 IFIT1P09914 478 aaKnown RBP7.96□□□□□ -1.14
HERC1-208ENST00000560462 TNFAIP2Q03169 654 aa7.96□□□□□ -1.14
HERC1-208ENST00000560462 GPNMBQ14956 572 aa7.96□□□□□ -1.14
HERC1-208ENST00000560462 TCTN1Q2MV58 587 aa7.96□□□□□ -1.14
HERC1-208ENST00000560462 MYOCDQ8IZQ8 938 aa7.96□□□□□ -1.14
HERC1-208ENST00000560462 CCDC155Q8N6L0 562 aa7.96□□□□□ -1.14
HERC1-208ENST00000560462 GLIS3Q8NEA6 775 aa7.96□□□□□ -1.14
HERC1-208ENST00000560462 DHX36Q9H2U1 1008 aaKnown RBP7.96□□□□□ -1.14
HERC1-208ENST00000560462 PNNQ9H307 717 aaKnown RBP7.96□□□□□ -1.14
HERC1-208ENST00000560462 DNAJC18Q9H819 358 aa7.96□□□□□ -1.14
HERC1-208ENST00000560462 SMG5Q9UPR3 1016 aaKnown RBP7.96□□□□□ -1.14
HERC1-208ENST00000560462 DYNC1LI1Q9Y6G9 523 aaKnown RBP7.96□□□□□ -1.14
HERC1-208ENST00000560462 MROH7-TTC4A0A0A0MT08 1334 aa7.96□□□□□ -1.14
HERC1-208ENST00000560462 TEX15Q9BXT5 2789 aa7.95□□□□□ -1.14
HERC1-208ENST00000560462 PARNO95453 639 aaKnown RBP7.95□□□□□ -1.14
HERC1-208ENST00000560462 CXCL10P02778 98 aa7.95□□□□□ -1.14
HERC1-208ENST00000560462 RB1P06400 928 aa7.95□□□□□ -1.14
HERC1-208ENST00000560462 NRIP1P48552 1158 aa7.95□□□□□ -1.14
HERC1-208ENST00000560462 C19orf57Q0VDD7 668 aa7.95□□□□□ -1.14
HERC1-208ENST00000560462 CCDC27Q2M243 656 aa7.95□□□□□ -1.14
HERC1-208ENST00000560462 FAM47CQ5HY64 1035 aa7.95□□□□□ -1.14
HERC1-208ENST00000560462 B4GALNT3Q6L9W6 998 aa7.95□□□□□ -1.14
HERC1-208ENST00000560462 LIN28BQ6ZN17 250 aaKnown RBP eCLIP7.95□□□□□ -1.14
HERC1-208ENST00000560462 SND1Q7KZF4 910 aaKnown RBP eCLIP7.95□□□□□ -1.14
HERC1-208ENST00000560462 SIX5Q8N196 739 aa7.95□□□□□ -1.14
HERC1-208ENST00000560462 MAGEB6Q8N7X4 407 aa7.95□□□□□ -1.14
HERC1-208ENST00000560462 PNMA1Q8ND90 353 aa7.95□□□□□ -1.14
HERC1-208ENST00000560462 ACER1Q8TDN7 264 aa7.95□□□□□ -1.14
HERC1-208ENST00000560462 AFAP1L1Q8TED9 768 aa7.95□□□□□ -1.14
HERC1-208ENST00000560462 BBC3Q96PG8 261 aaPredicted RBP7.95□□□□□ -1.14
HERC1-208ENST00000560462 UCN2Q96RP3 112 aa7.95□□□□□ -1.14
HERC1-208ENST00000560462 VRTNQ9H8Y1 702 aa7.95□□□□□ -1.14
HERC1-208ENST00000560462 ERVK-5Q9HDB9 667 aa7.95□□□□□ -1.14
HERC1-208ENST00000560462 NOD1Q9Y239 953 aa7.95□□□□□ -1.14
HERC1-208ENST00000560462 GPR75-ASB3A0A0A6YYF3 556 aa7.94□□□□□ -1.14
HERC1-208ENST00000560462 C11orf97A0A1B0GVM6 126 aaPredicted RBP7.94□□□□□ -1.14
HERC1-208ENST00000560462 E9PSI1 815 aa7.94□□□□□ -1.14
HERC1-208ENST00000560462 DYNC1LI2O43237 492 aaPredicted RBP7.94□□□□□ -1.14
HERC1-208ENST00000560462 MAP4K4O95819 1239 aaPredicted RBP7.94□□□□□ -1.14
HERC1-208ENST00000560462 MMP1P03956 469 aa7.94□□□□□ -1.14
HERC1-208ENST00000560462 ASGR2P07307 311 aa7.94□□□□□ -1.14
HERC1-208ENST00000560462 MCAMP43121 646 aa7.94□□□□□ -1.14
HERC1-208ENST00000560462 TBC1D8BQ0IIM8 1120 aa7.94□□□□□ -1.14
HERC1-208ENST00000560462 TMEM132BQ14DG7 1078 aa7.94□□□□□ -1.14
HERC1-208ENST00000560462 RAB3GAP1Q15042 981 aa7.94□□□□□ -1.14
HERC1-208ENST00000560462 IL31Q6EBC2 164 aa7.94□□□□□ -1.14
HERC1-208ENST00000560462 FOXP4Q8IVH2 680 aaPredicted RBP7.94□□□□□ -1.14
HERC1-208ENST00000560462 C1orf210Q8IVY1 113 aa7.94□□□□□ -1.14
HERC1-208ENST00000560462 VGLL2Q8N8G2 317 aa7.94□□□□□ -1.14
HERC1-208ENST00000560462 LRRN4Q8WUT4 740 aa7.94□□□□□ -1.14
HERC1-208ENST00000560462 ATG4CQ96DT6 458 aa7.94□□□□□ -1.14
HERC1-208ENST00000560462 DDX11Q96FC9 970 aa7.94□□□□□ -1.14
HERC1-208ENST00000560462 TFIP11Q9UBB9 837 aaKnown RBP7.94□□□□□ -1.14
HERC1-208ENST00000560462 GMEB2Q9UKD1 530 aa7.94□□□□□ -1.14
HERC1-208ENST00000560462 FBXL21Q9UKT6 434 aa7.94□□□□□ -1.14
HERC1-208ENST00000560462 GNEQ9Y223 722 aaKnown RBP7.94□□□□□ -1.14
HERC1-208ENST00000560462 FANCMQ8IYD8 2048 aa7.94□□□□□ -1.14
HERC1-208ENST00000560462 KALRNO60229 2985 aa7.94□□□□□ -1.14
HERC1-208ENST00000560462 ATG2AQ2TAZ0 1938 aa7.93□□□□□ -1.14
HERC1-208ENST00000560462 MYH2Q9UKX2 1941 aa7.93□□□□□ -1.14
HERC1-208ENST00000560462 C2CD4DB7Z1M9 353 aa7.93□□□□□ -1.14
HERC1-208ENST00000560462 ELL2O00472 640 aaPredicted RBP7.93□□□□□ -1.14
HERC1-208ENST00000560462 ARHGAP6O43182 974 aa7.93□□□□□ -1.14
HERC1-208ENST00000560462 NBNO60934 754 aa7.93□□□□□ -1.14
HERC1-208ENST00000560462 FLOT1O75955 427 aa7.93□□□□□ -1.14
HERC1-208ENST00000560462 HSPA5P11021 654 aaKnown RBP7.93□□□□□ -1.14
HERC1-208ENST00000560462 SELPP16109 830 aa7.93□□□□□ -1.14
HERC1-208ENST00000560462 BMPR1AP36894 532 aa7.93□□□□□ -1.14
HERC1-208ENST00000560462 SPEM2Q0P670 501 aa7.93□□□□□ -1.14
HERC1-208ENST00000560462 SEMA3FQ13275 785 aa7.93□□□□□ -1.14
HERC1-208ENST00000560462 PUM3Q15397 648 aaKnown RBP7.93□□□□□ -1.14
HERC1-208ENST00000560462 CCDC30Q5VVM6 783 aa7.93□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms