RNA–Protein interactions for RNA: ENST00000560321.5

KNSTRN-210, Transcript of kinetochore localized astrin (SPAG5) binding protein, humanhuman

TSL 3

Gene KNSTRN, Length 940 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNSTRN-210ENST00000560321 PGM5Q15124 567 aa22.75■■□□□ 1.23
KNSTRN-210ENST00000560321 TMEM63BQ5T3F8 832 aa22.75■■□□□ 1.23
KNSTRN-210ENST00000560321 FAM109BQ6ICB4 259 aaPredicted RBP22.75■■□□□ 1.23
KNSTRN-210ENST00000560321 DHX37Q8IY37 1157 aaKnown RBP22.75■■□□□ 1.23
KNSTRN-210ENST00000560321 KATNAL1Q9BW62 490 aa22.75■■□□□ 1.23
KNSTRN-210ENST00000560321 PPP1R12CQ9BZL4 782 aa22.75■■□□□ 1.23
KNSTRN-210ENST00000560321 ALDH8A1Q9H2A2 487 aaPredicted RBP22.75■■□□□ 1.23
KNSTRN-210ENST00000560321 NOD1Q9Y239 953 aa22.75■■□□□ 1.23
KNSTRN-210ENST00000560321 ITGB8P26012 769 aa22.74■■□□□ 1.23
KNSTRN-210ENST00000560321 SMAD3P84022 425 aaKnown RBP22.74■■□□□ 1.23
KNSTRN-210ENST00000560321 LY6KQ17RY6 165 aa22.74■■□□□ 1.23
KNSTRN-210ENST00000560321 ZNF697Q5TEC3 545 aa22.74■■□□□ 1.23
KNSTRN-210ENST00000560321 VSIG10LQ86VR7 867 aa22.74■■□□□ 1.23
KNSTRN-210ENST00000560321 MICU3Q86XE3 530 aa22.74■■□□□ 1.23
KNSTRN-210ENST00000560321 RPUSD2Q8IZ73 545 aaKnown RBP22.74■■□□□ 1.23
KNSTRN-210ENST00000560321 EMID1Q96A84 441 aaPredicted RBP22.74■■□□□ 1.23
KNSTRN-210ENST00000560321 DDX41Q9UJV9 622 aaKnown RBP22.74■■□□□ 1.23
KNSTRN-210ENST00000560321 B4GALT4O60513 344 aa22.73■■□□□ 1.23
KNSTRN-210ENST00000560321 C9orf50Q5SZB4 431 aa22.73■■□□□ 1.23
KNSTRN-210ENST00000560321 XRRA1Q6P2D8 792 aa22.73■■□□□ 1.23
KNSTRN-210ENST00000560321 SKAP1Q86WV1 359 aa22.73■■□□□ 1.23
KNSTRN-210ENST00000560321 CCDC155Q8N6L0 562 aa22.73■■□□□ 1.23
KNSTRN-210ENST00000560321 AFG1LQ8WV93 481 aa22.73■■□□□ 1.23
KNSTRN-210ENST00000560321 COPS5Q92905 334 aa22.73■■□□□ 1.23
KNSTRN-210ENST00000560321 ZBTB43O43298 467 aa22.72■■□□□ 1.23
KNSTRN-210ENST00000560321 ARIH2O95376 493 aa22.72■■□□□ 1.23
KNSTRN-210ENST00000560321 MMP3P08254 477 aa22.72■■□□□ 1.23
KNSTRN-210ENST00000560321 PTGS1P23219 599 aa22.72■■□□□ 1.23
KNSTRN-210ENST00000560321 NBPF20Q3BBV1 942 aa22.72■■□□□ 1.23
KNSTRN-210ENST00000560321 TEX2Q8IWB9 1127 aa22.72■■□□□ 1.23
KNSTRN-210ENST00000560321 PPTC7Q8NI37 304 aa22.72■■□□□ 1.23
KNSTRN-210ENST00000560321 LRRC2Q9BYS8 371 aa22.72■■□□□ 1.23
KNSTRN-210ENST00000560321 TRPV6Q9H1D0 765 aa22.72■■□□□ 1.23
KNSTRN-210ENST00000560321 EHMT1Q9H9B1 1298 aa22.72■■□□□ 1.23
KNSTRN-210ENST00000560321 GRIN2DO15399 1336 aa22.72■■□□□ 1.23
KNSTRN-210ENST00000560321 CCDC196A0A1B0GTZ2 297 aa22.71■■□□□ 1.23
KNSTRN-210ENST00000560321 PIK3CDO00329 1044 aa22.71■■□□□ 1.23
KNSTRN-210ENST00000560321 CSF2RAP15509 400 aa22.71■■□□□ 1.23
KNSTRN-210ENST00000560321 CHMP4BP1P59074 171 aa22.71■■□□□ 1.23
KNSTRN-210ENST00000560321 ARHGAP1Q07960 439 aa22.71■■□□□ 1.23
KNSTRN-210ENST00000560321 BFSP2Q13515 415 aa22.71■■□□□ 1.23
KNSTRN-210ENST00000560321 ERICH6BQ5W0A0 696 aa22.71■■□□□ 1.23
KNSTRN-210ENST00000560321 SRBD1Q8N5C6 995 aaKnown RBP22.71■■□□□ 1.23
KNSTRN-210ENST00000560321 RETREG2Q8NC44 543 aa22.71■■□□□ 1.23
KNSTRN-210ENST00000560321 PSTPIP2Q9H939 334 aa22.71■■□□□ 1.23
KNSTRN-210ENST00000560321 MLXIPQ9HAP2 919 aa22.71■■□□□ 1.23
KNSTRN-210ENST00000560321 HSFX4A0A1B0GTS1 333 aaPredicted RBP22.7■■□□□ 1.22
KNSTRN-210ENST00000560321 HSFX3A0A1B0GWH4 333 aaPredicted RBP22.7■■□□□ 1.22
KNSTRN-210ENST00000560321 PFKMP08237 780 aa22.7■■□□□ 1.22
KNSTRN-210ENST00000560321 RXRAP19793 462 aa22.7■■□□□ 1.22
KNSTRN-210ENST00000560321 PSMA5P28066 241 aa22.7■■□□□ 1.22
KNSTRN-210ENST00000560321 CYP2C18P33260 490 aa22.7■■□□□ 1.22
KNSTRN-210ENST00000560321 RCAN1P53805 252 aa22.7■■□□□ 1.22
KNSTRN-210ENST00000560321 RTN1Q16799 776 aa22.7■■□□□ 1.22
KNSTRN-210ENST00000560321 SLC35G1Q2M3R5 365 aa22.7■■□□□ 1.22
KNSTRN-210ENST00000560321 APOA5Q6Q788 366 aa22.7■■□□□ 1.22
KNSTRN-210ENST00000560321 TMTC3Q6ZXV5 915 aa22.7■■□□□ 1.22
KNSTRN-210ENST00000560321 NOC4LQ9BVI4 516 aaKnown RBP22.7■■□□□ 1.22
KNSTRN-210ENST00000560321 IL23AQ9NPF7 189 aa22.7■■□□□ 1.22
KNSTRN-210ENST00000560321 TRIP12Q14669 1992 aaPredicted RBP22.7■■□□□ 1.22
KNSTRN-210ENST00000560321 KAT6AQ92794 2004 aa22.7■■□□□ 1.22
KNSTRN-210ENST00000560321 EPB41L2O43491 1005 aaKnown RBP22.69■■□□□ 1.22
KNSTRN-210ENST00000560321 PPFIA4O75335 1185 aa22.69■■□□□ 1.22
KNSTRN-210ENST00000560321 PLEKHA8P1O95397 391 aa22.69■■□□□ 1.22
KNSTRN-210ENST00000560321 NEDD9Q14511 834 aa22.69■■□□□ 1.22
KNSTRN-210ENST00000560321 NLRX1Q86UT6 975 aa22.69■■□□□ 1.22
KNSTRN-210ENST00000560321 NAP1L2Q9ULW6 460 aaPredicted RBP22.69■■□□□ 1.22
KNSTRN-210ENST00000560321 TMEM265A0A087WTH1 108 aa22.68■■□□□ 1.22
KNSTRN-210ENST00000560321 SPDYE3A6NKU9 549 aa22.68■■□□□ 1.22
KNSTRN-210ENST00000560321 hCG_1984214I3L0E3 225 aa22.68■■□□□ 1.22
KNSTRN-210ENST00000560321 NOP56O00567 594 aaKnown RBP22.68■■□□□ 1.22
KNSTRN-210ENST00000560321 FGBP02675 491 aa22.68■■□□□ 1.22
KNSTRN-210ENST00000560321 EXOSC10Q01780 885 aaKnown RBP22.68■■□□□ 1.22
KNSTRN-210ENST00000560321 CELF3Q5SZQ8 465 aaKnown RBP22.68■■□□□ 1.22
KNSTRN-210ENST00000560321 BLOC1S2Q6QNY1 142 aa22.68■■□□□ 1.22
KNSTRN-210ENST00000560321 HEATR3Q7Z4Q2 680 aa22.68■■□□□ 1.22
KNSTRN-210ENST00000560321 CCDC82Q8N4S0 544 aa22.68■■□□□ 1.22
KNSTRN-210ENST00000560321 ZNF713Q8N859 430 aaPredicted RBP22.68■■□□□ 1.22
KNSTRN-210ENST00000560321 C7orf31Q8N865 590 aa22.68■■□□□ 1.22
KNSTRN-210ENST00000560321 GIMAP8Q8ND71 665 aaPredicted RBP22.68■■□□□ 1.22
KNSTRN-210ENST00000560321 CDHR1Q96JP9 859 aa22.68■■□□□ 1.22
KNSTRN-210ENST00000560321 SPATA33Q96N06 139 aa22.68■■□□□ 1.22
KNSTRN-210ENST00000560321 BUD13Q9BRD0 619 aaKnown RBP eCLIP22.68■■□□□ 1.22
KNSTRN-210ENST00000560321 GLT8D2Q9H1C3 349 aa22.68■■□□□ 1.22
KNSTRN-210ENST00000560321 TRMT13Q9NUP7 481 aaKnown RBP22.68■■□□□ 1.22
KNSTRN-210ENST00000560321 FRMPD4Q14CM0 1322 aa22.67■■□□□ 1.22
KNSTRN-210ENST00000560321 PITPNM1O00562 1244 aa22.67■■□□□ 1.22
KNSTRN-210ENST00000560321 FIBPO43427 364 aa22.67■■□□□ 1.22
KNSTRN-210ENST00000560321 GGPS1O95749 300 aa22.67■■□□□ 1.22
KNSTRN-210ENST00000560321 CENPBP07199 599 aaPredicted RBP22.67■■□□□ 1.22
KNSTRN-210ENST00000560321 HSPA4P34932 840 aa22.67■■□□□ 1.22
KNSTRN-210ENST00000560321 RFC2P35250 354 aa22.67■■□□□ 1.22
KNSTRN-210ENST00000560321 EPHB4P54760 987 aa22.67■■□□□ 1.22
KNSTRN-210ENST00000560321 MYSM1Q5VVJ2 828 aa22.67■■□□□ 1.22
KNSTRN-210ENST00000560321 PCNX4Q63HM2 1172 aa22.67■■□□□ 1.22
KNSTRN-210ENST00000560321 SESTD1Q86VW0 696 aa22.67■■□□□ 1.22
KNSTRN-210ENST00000560321 MTMR10Q9NXD2 777 aa22.67■■□□□ 1.22
KNSTRN-210ENST00000560321 KLF18A0A0U1RQI7 1052 aa22.66■■□□□ 1.22
KNSTRN-210ENST00000560321 GOLGA8AA7E2F4 631 aa22.66■■□□□ 1.22
KNSTRN-210ENST00000560321 GOLGA8BA8MQT2 603 aa22.66■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms