RNA–Protein interactions for RNA: ENST00000560070.5

USP3-217, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 4

Gene USP3, Length 545 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-217ENST00000560070 ADAMTS4O75173 837 aa9.81□□□□□ -0.84
USP3-217ENST00000560070 CTDNEP1O95476 244 aa9.81□□□□□ -0.84
USP3-217ENST00000560070 ASGR1P07306 291 aa9.81□□□□□ -0.84
USP3-217ENST00000560070 MYL3P08590 195 aa9.81□□□□□ -0.84
USP3-217ENST00000560070 ACLYP53396 1101 aa9.81□□□□□ -0.84
USP3-217ENST00000560070 GJA9P57773 515 aa9.81□□□□□ -0.84
USP3-217ENST00000560070 GHRHRQ02643 423 aa9.81□□□□□ -0.84
USP3-217ENST00000560070 TTLL4Q14679 1199 aa9.81□□□□□ -0.84
USP3-217ENST00000560070 LRRC26Q2I0M4 334 aa9.81□□□□□ -0.84
USP3-217ENST00000560070 DUSP28Q4G0W2 176 aa9.81□□□□□ -0.84
USP3-217ENST00000560070 CXCL17Q6UXB2 119 aa9.81□□□□□ -0.84
USP3-217ENST00000560070 SLC39A5Q6ZMH5 540 aa9.81□□□□□ -0.84
USP3-217ENST00000560070 CCDC83Q8IWF9 413 aa9.81□□□□□ -0.84
USP3-217ENST00000560070 DHX37Q8IY37 1157 aaKnown RBP9.81□□□□□ -0.84
USP3-217ENST00000560070 C7orf61Q8IZ16 206 aa9.81□□□□□ -0.84
USP3-217ENST00000560070 KLHDC9Q8NEP7 349 aa9.81□□□□□ -0.84
USP3-217ENST00000560070 RASGRP4Q8TDF6 673 aa9.81□□□□□ -0.84
USP3-217ENST00000560070 SCFD2Q8WU76 684 aa9.81□□□□□ -0.84
USP3-217ENST00000560070 IL17RAQ96F46 866 aa9.81□□□□□ -0.84
USP3-217ENST00000560070 RNF26Q9BY78 433 aaPredicted RBP9.81□□□□□ -0.84
USP3-217ENST00000560070 MAF1Q9H063 256 aa9.81□□□□□ -0.84
USP3-217ENST00000560070 C6orf50Q9HD87 102 aa9.81□□□□□ -0.84
USP3-217ENST00000560070 GJB4Q9NTQ9 266 aa9.81□□□□□ -0.84
USP3-217ENST00000560070 PKD2L1Q9P0L9 805 aa9.81□□□□□ -0.84
USP3-217ENST00000560070 KCNJ14Q9UNX9 436 aa9.81□□□□□ -0.84
USP3-217ENST00000560070 ATP11BQ9Y2G3 1177 aa9.81□□□□□ -0.84
USP3-217ENST00000560070 MRVI1Q9Y6F6 885 aa9.81□□□□□ -0.84
USP3-217ENST00000560070 LOC102724159A0A0B4J2E5 919 aa9.8□□□□□ -0.84
USP3-217ENST00000560070 PIK3CDO00329 1044 aa9.8□□□□□ -0.84
USP3-217ENST00000560070 CTAGE5O15320 804 aa9.8□□□□□ -0.84
USP3-217ENST00000560070 JAK2O60674 1132 aa9.8□□□□□ -0.84
USP3-217ENST00000560070 CDKL5O76039 1030 aa9.8□□□□□ -0.84
USP3-217ENST00000560070 RGS20O76081 388 aa9.8□□□□□ -0.84
USP3-217ENST00000560070 COL6A1P12109 1028 aa9.8□□□□□ -0.84
USP3-217ENST00000560070 SYN1P17600 705 aa9.8□□□□□ -0.84
USP3-217ENST00000560070 CAPN2P17655 700 aa9.8□□□□□ -0.84
USP3-217ENST00000560070 ZNF76P36508 570 aa9.8□□□□□ -0.84
USP3-217ENST00000560070 PSMC6P62333 389 aa9.8□□□□□ -0.84
USP3-217ENST00000560070 MRPS9P82933 396 aaKnown RBP9.8□□□□□ -0.84
USP3-217ENST00000560070 SP2Q02086 613 aa9.8□□□□□ -0.84
USP3-217ENST00000560070 SP4Q02446 784 aa9.8□□□□□ -0.84
USP3-217ENST00000560070 PWP2Q15269 919 aaKnown RBP9.8□□□□□ -0.84
USP3-217ENST00000560070 FSCN1Q16658 493 aaKnown RBP9.8□□□□□ -0.84
USP3-217ENST00000560070 CCDC62Q6P9F0 684 aa9.8□□□□□ -0.84
USP3-217ENST00000560070 ORC3Q9UBD5 711 aaPredicted RBP9.8□□□□□ -0.84
USP3-217ENST00000560070 DDX41Q9UJV9 622 aaKnown RBP9.8□□□□□ -0.84
USP3-217ENST00000560070 ZMYND8Q9ULU4 1186 aaPredicted RBP9.8□□□□□ -0.84
USP3-217ENST00000560070 A0A1W2PQ45 241 aaPredicted RBP9.79□□□□□ -0.84
USP3-217ENST00000560070 A0A1W2PQY0 241 aa9.79□□□□□ -0.84
USP3-217ENST00000560070 hCG_1984214I3L0E3 225 aa9.79□□□□□ -0.84
USP3-217ENST00000560070 ZEB2O60315 1214 aa9.79□□□□□ -0.84
USP3-217ENST00000560070 DEXIO95424 95 aa9.79□□□□□ -0.84
USP3-217ENST00000560070 GH1P01241 217 aa9.79□□□□□ -0.84
USP3-217ENST00000560070 KCNA4P22459 653 aa9.79□□□□□ -0.84
USP3-217ENST00000560070 RTP1P59025 263 aa9.79□□□□□ -0.84
USP3-217ENST00000560070 RABEP1Q15276 862 aa9.79□□□□□ -0.84
USP3-217ENST00000560070 CCSAPQ6IQ19 270 aaPredicted RBP9.79□□□□□ -0.84
USP3-217ENST00000560070 PPP1R18Q6NYC8 613 aa9.79□□□□□ -0.84
USP3-217ENST00000560070 NLRX1Q86UT6 975 aa9.79□□□□□ -0.84
USP3-217ENST00000560070 ZNF713Q8N859 430 aaPredicted RBP9.79□□□□□ -0.84
USP3-217ENST00000560070 PCSK9Q8NBP7 692 aaKnown RBP9.79□□□□□ -0.84
USP3-217ENST00000560070 CCDC12Q8WUD4 166 aaPredicted RBP9.79□□□□□ -0.84
USP3-217ENST00000560070 AFG1LQ8WV93 481 aa9.79□□□□□ -0.84
USP3-217ENST00000560070 GTF3C6Q969F1 213 aa9.79□□□□□ -0.84
USP3-217ENST00000560070 TBC1D32Q96NH3 1257 aa9.79□□□□□ -0.84
USP3-217ENST00000560070 ALG1Q9BT22 464 aa9.79□□□□□ -0.84
USP3-217ENST00000560070 ANO3Q9BYT9 981 aa9.79□□□□□ -0.84
USP3-217ENST00000560070 ZMYND12Q9H0C1 365 aa9.79□□□□□ -0.84
USP3-217ENST00000560070 UPF3AQ9H1J1 476 aaKnown RBP9.79□□□□□ -0.84
USP3-217ENST00000560070 EHMT1Q9H9B1 1298 aa9.79□□□□□ -0.84
USP3-217ENST00000560070 MLXIPQ9HAP2 919 aa9.79□□□□□ -0.84
USP3-217ENST00000560070 STARD7Q9NQZ5 370 aa9.79□□□□□ -0.84
USP3-217ENST00000560070 RBM27Q9P2N5 1060 aaKnown RBP9.79□□□□□ -0.84
USP3-217ENST00000560070 PHF24Q9UPV7 400 aa9.79□□□□□ -0.84
USP3-217ENST00000560070 MYH8P13535 1937 aa9.79□□□□□ -0.84
USP3-217ENST00000560070 A0A0G2JMZ2 1700 aa9.79□□□□□ -0.84
USP3-217ENST00000560070 NID2Q14112 1375 aa9.78□□□□□ -0.84
USP3-217ENST00000560070 MYH4Q9Y623 1939 aa9.78□□□□□ -0.84
USP3-217ENST00000560070 LAMA4Q16363 1823 aa9.78□□□□□ -0.84
USP3-217ENST00000560070 SPATA31C2B4DYI2 1134 aa9.78□□□□□ -0.84
USP3-217ENST00000560070 H0YGN5 161 aa9.78□□□□□ -0.84
USP3-217ENST00000560070 NKRFO15226 690 aaKnown RBP eCLIP9.78□□□□□ -0.846e-7■■□□□ 13.1
USP3-217ENST00000560070 ST18O60284 1047 aa9.78□□□□□ -0.84
USP3-217ENST00000560070 GGPS1O95749 300 aa9.78□□□□□ -0.84
USP3-217ENST00000560070 FOSP01100 380 aaPredicted RBP9.78□□□□□ -0.84
USP3-217ENST00000560070 FDPSP14324 419 aaKnown RBP9.78□□□□□ -0.84
USP3-217ENST00000560070 ITGB5P18084 799 aa9.78□□□□□ -0.84
USP3-217ENST00000560070 GNA11P29992 359 aa9.78□□□□□ -0.84
USP3-217ENST00000560070 CLK2P49760 499 aaKnown RBP9.78□□□□□ -0.84
USP3-217ENST00000560070 GUCY1B3Q02153 619 aa9.78□□□□□ -0.84
USP3-217ENST00000560070 ST3GAL1Q11201 340 aa9.78□□□□□ -0.84
USP3-217ENST00000560070 GNPTABQ3T906 1256 aa9.78□□□□□ -0.84
USP3-217ENST00000560070 TRIM60Q495X7 471 aa9.78□□□□□ -0.84
USP3-217ENST00000560070 PCNX4Q63HM2 1172 aa9.78□□□□□ -0.84
USP3-217ENST00000560070 CYFIP1Q7L576 1253 aa9.78□□□□□ -0.84
USP3-217ENST00000560070 NSUN7Q8NE18 718 aaKnown RBP9.78□□□□□ -0.84
USP3-217ENST00000560070 CYP2W1Q8TAV3 490 aa9.78□□□□□ -0.84
USP3-217ENST00000560070 ZSCAN31Q96LW9 406 aaPredicted RBP9.78□□□□□ -0.84
USP3-217ENST00000560070 GLT1D1Q96MS3 346 aa9.78□□□□□ -0.84
USP3-217ENST00000560070 SPATA33Q96N06 139 aa9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms